hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-16513384/chunk_1/iprscan-20090618-16513384.nocrc
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Query sequence: hk07181
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00385.14.ls 'chromo' (CHRromatin Organisation MOdifier)     73.4    6.5e-19   1
PF00385.14.fs 'chromo' (CHRromatin Organisation MOdifier)     71.7    8.2e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00385.14.fs   1/1      48    97 ..     1    68 []    71.7  8.2e-19
PF00385.14.ls   1/1      48    97 ..     1    68 []    73.4  6.5e-19

Alignments of top-scoring domains:
PF00385.14.fs: domain 1 of 1, from 48 to 97: score 71.7, E = 8.2e-19
                   *->yeVErILdhrlrkggkksvplpekpitgleYLVKWkGypyeenTWEp
                      + VE I ++r+rkg+              eYLVKWkG+p++++TWEp
     hk07181    48    FAVESIRKKRVRKGKV-------------EYLVKWKGWPPKYSTWEP 81   

                   eenLkackgfpelkieefeqr<-*
                   ee++      p+l + ++e++   
     hk07181    82 EEHIL----DPRL-VMAYEEK    97   

PF00385.14.ls: domain 1 of 1, from 48 to 97: score 73.4, E = 6.5e-19
                   *->yeVErILdhrlrkggkksvplpekpitgleYLVKWkGypyeenTWEp
                      + VE I ++r+rkg+              eYLVKWkG+p++++TWEp
     hk07181    48    FAVESIRKKRVRKGKV-------------EYLVKWKGWPPKYSTWEP 81   

                   eenLkackgfpelkieefeqr<-*
                   ee++      p+l + ++e++   
     hk07181    82 EEHIL----DPRL-VMAYEEK    97   

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