hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-16513384/chunk_1/iprscan-20090618-16513384.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: hk07181
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00298                                                  75.8    5.4e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00298    1/1      47    99 ..     1    63 []    75.8  5.4e-18

Alignments of top-scoring domains:
SM00298: domain 1 of 1, from 47 to 99: score 75.8, E = 5.4e-18
                   *->eyeivEkIldhrwekkkgeveYLVKWkGysysedtWEpeenleemLk
                      +++ vE I ++r   +kg+veYLVKWkG+++++ tWEpee+++    
     hk07181    47    VFA-VESIRKKR--VRKGKVEYLVKWKGWPPKYSTWEPEEHIL---- 86   

                   kkncekkldeykkrek<-*
                      +++++ +y+++e+   
     hk07181    87 ---DPRLVMAYEEKEE    99   

//