hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-01182785/chunk_1/iprscan-20080813-01182785.nocrc
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Query sequence: hk07237
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00735.9.fs Septin                                         247.3    3.8e-73   1
PF00735.9.ls Septin                                          82.8    9.7e-22   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00735.9.fs   1/1       1   160 [.   127   292 .]   247.3  3.8e-73
PF00735.9.ls   1/1       1   160 [.     1   292 []    82.8  9.7e-22

Alignments of top-scoring domains:
PF00735.9.fs: domain 1 of 1, from 1 to 160: score 247.3, E = 3.8e-73
                   *->YFIsPtGHgLkpLDvefMKkLsekVNlIPVIAKADtLTadElqefKk
                      YFIsPtGH+Lk+LD  +MK L++kVN+IPVIAKADt  + Elq fK 
     hk07237     1    YFISPTGHSLKTLDLLTMKNLDSKVNIIPVIAKADTVSKTELQKFKI 47   

                   rIredIeaqkIkIYkFPPdeeedeDEefketteqLkssiPFAIvGSntei
                   +++++++  +  IY+  +++++d    +++ +  +   +PFA+vGS +e+
     hk07237    48 KLMSELVSNGVQIYQ--FPTDDDT---IAKVNAAMNGQLPFAVVGSMDEV 92   

                   engdGekVRGRkYPWGvVEVENpsHCDFvkLRnlLirtHLqDLkevThel
                        ++V++R+YPWGvV VEN++HCDFvkLR +Li t+++DL e Th+ 
     hk07237    93 KV-GNKMVKARQYPWGVVQVENENHCDFVKLREMLICTNMEDLREQTHTR 141  

                   lYEnYRsekLsalgrkadn<-*
                   +YE YR+ kL+++g +  +   
     hk07237   142 HYELYRRCKLEEMGFTDVG    160  

PF00735.9.ls: domain 1 of 1, from 1 to 160: score 82.8, E = 9.7e-22
                   *->kGfdFTLMVVGeSGLGKtTlINTLFltdLiranlanDsreipgpsEt
                                                                     
     hk07237     -    ----------------------------------------------- -    

                   kikktveIkeatkveiEEdGvkLnLtViDTPGFGDaiDNsncWkPIveYI
                                                                     
     hk07237     - -------------------------------------------------- -    

                   deQfdqYLraEsrinRntkivDnRVHcCLYFIsPtGHgLkpLDvefMKkL
                                                YFIsPtGH+Lk+LD  +MK L
     hk07237     1 -----------------------------YFISPTGHSLKTLDLLTMKNL 21   

                   sekVNlIPVIAKADtLTadElqefKkrIredIeaqkIkIYkFPPdeeede
                   ++kVN+IPVIAKADt  + Elq fK +++++++  +  IY+  +++++d 
     hk07237    22 DSKVNIIPVIAKADTVSKTELQKFKIKLMSELVSNGVQIYQ--FPTDDDT 69   

                   DEefketteqLkssiPFAIvGSnteiengdGekVRGRkYPWGvVEVENps
                      +++ +  +   +PFA+vGS +e+     ++V++R+YPWGvV VEN++
     hk07237    70 ---IAKVNAAMNGQLPFAVVGSMDEVKV-GNKMVKARQYPWGVVQVENEN 115  

                   HCDFvkLRnlLirtHLqDLkevThellYEnYRsekLsalgrkadn<-*
                   HCDFvkLR +Li t+++DL e Th+ +YE YR+ kL+++g +  +   
     hk07237   116 HCDFVKLREMLICTNMEDLREQTHTRHYELYRRCKLEEMGFTDVG    160  

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