hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-16575983/chunk_1/iprscan-20090618-16575983.nocrc
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Query sequence: hk08207
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
TIGR01235    pyruv_carbox: pyruvate carboxylase        2567.0          0   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
TIGR01235      1/1      65  1204 .]     1  1169 []  2567.0        0

Alignments of top-scoring domains:
TIGR01235: domain 1 of 1, from 65 to 1204: score 2567.0, E = 0
                   *->KvLVANRGEIAIRvFRAanELgIrTVAvYSeEDklslHRqKADEaYl
                      Kv VANRGEIAIRvFRA++ELgIrTVA+YSe+D + +HRqKADEaYl
     hk08207    65    KVMVANRGEIAIRVFRACTELGIRTVAIYSEQDTGQMHRQKADEAYL 111  

                   VGeGpqLARDlkPveAYLsIdEIIrvAKknkVDAIHPGYGFLSEnseFAd
                   +G+G      l+Pv AYL I+ II vAK+n VDA+HPGYGFLSE+ +FA+
     hk08207   112 IGRG------LAPVQAYLHIPDIIKVAKENNVDAVHPGYGFLSERADFAQ 155  

                   avvkAGIvFIGPkaevldqlGDKVaARnlAikAGVPvVPGTdGPveTlEE
                   a+ +AG++FIGP++ev++ +GDKV AR  Ai AGVPvVPGTd P++ l E
     hk08207   156 ACQDAGVRFIGPSPEVVRKMGDKVEARAIAIAAGVPVVPGTDAPITSLHE 205  

                   vldFakaiGYPVIiKAsyGGGGRGMRVVRseedVadafqRAkSEAkAAFG
                   +  F + +G+P+I+KA+yGGGGRGMRVV s e+++++++RA SEA AAFG
     hk08207   206 AHEFSNTYGFPIIFKAAYGGGGRGMRVVHSYEELEENYTRAYSEALAAFG 255  

                   NdevyvEKliErPkHIEVQlLGDkhGNVVHLFERDCSVQRRHQKVVEvAP
                   N++ +vEK+iE+P+HIEVQ+LGD  GN+ HL+ERDCS+QRRHQKVVE+AP
     hk08207   256 NGALFVEKFIEKPRHIEVQILGDQYGNILHLYERDCSIQRRHQKVVEIAP 305  

                   ApsLsrEvRDeiaeyAVKLAKevnYiNAGTVEFLvDndtGkFYFIEVNPR
                   A  L + +R  ++ ++VKLAK v+Y+NAGTVEFLvD  + k+YFIEVN R
     hk08207   306 AAHLDPQLRTRLTSDSVKLAKQVGYENAGTVEFLVDRHG-KHYFIEVNSR 354  

                   iQVEHTvTEeITGIDIVqaQIrvAeGasLpskqlGvpeQedIkTrGyAIQ
                   +QVEHTvTEeIT +D+V aQI+vAeG sLp   lG+  Qe+I+ +G AIQ
     hk08207   355 LQVEHTVTEEITDVDLVHAQIHVAEGRSLP--DLGLR-QENIRINGCAIQ 401  

                   CRVTTEDPandFqPDTGRIevYRSagGfGvRLDgGnsYaGAIItPYYDSL
                   CRVTTEDPa  FqPDTGRIev+RS++G+G+RLD +++++GA+I+P+YDSL
     hk08207   402 CRVTTEDPARSFQPDTGRIEVFRSGEGMGIRLDNASAFQGAVISPHYDSL 451  

                   LVKvsawAstfeeaaaKMvRALrEFRIRGVKTNIPFLlnvlkhpKFleGs
                   LVKv+a++ +   aa KM RAL EFR+RGVKTNI FL nvl ++ Fl G+
     hk08207   452 LVKVIAHGKDHPTAATKMSRALAEFRVRGVKTNIAFLQNVLNNQQFLAGT 501  

                   YdTsFIDtTPeLFqfvKskdRAtKLLtYLadVtVNGsspelkkklKPled
                    dT FID+ PeLFq    ++RA+KLL+YL+ V VNG+++++  k  P   
     hk08207   502 VDTQFIDENPELFQLRPAQNRAQKLLHYLGHVMVNGPTTPIPVKASPSPT 551  

                   kPrvvkldvdqspvilvakEKGKKvsePprGtKQiLdEkGPegFAkwVRe
                    P v+ ++   +p              Pp G+++iL+  GPegFA++VR+
     hk08207   552 DPVVPAVPI--GP--------------PPAGFRDILLREGPEGFARAVRN 585  

                   qKsvLLtDTTfRDAHQSLLATRvRTHDLakIApttaHalpnLfSLEcWGG
                     ++LL+DTTfRDAHQSLLATRvRTHDL+kIAp++aH +  LfS+E+WGG
     hk08207   586 HPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGG 635  

                   ATFDVAmRFLhEDPWERLedlRkevPNilFQMLLRGANaVGYTNYPDNVv
                   ATFDVAmRFL E+PW RL  lR+++PNi+FQMLLRGANaVGYTNYPDNVv
     hk08207   636 ATFDVAMRFLYECPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVV 685  

                   kkFVkQaaqsGiDiFRVFDsLNwlenlklgmDAvkeaGkVvEAAICYTGD
                    kF++ a+ +G+D+FRVFDsLN+l+n+ lgm+A++ aG+VvEAAI+YTGD
     hk08207   686 FKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGD 735  

                   iLdparkKYDLkYYTnlAeELvkAGaHILgIKDMAGLLKPaAAKlLikAL
                   + dp r+KY L YY  lAeELv+AG+HIL+IKDMAGLLKP A   L+++L
     hk08207   736 VADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSL 785  

                   REkiPDlPIHlHTHDTSGaavAsmlAavEAGvDvVDVAvdSMSGlTSQPS
                   R   PDlP H+HTHDTSGa+vA mlA++ AG+DvVDVA dSMSG+TSQPS
     hk08207   786 RDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSGMTSQPS 835  

                   lgalvaaLeGserDpGlNvedvrelSaYWEevRklYaaFEsttdlKsPds
                   +galva   G+++D++   e v  +S YWE  R lYaaF +t ++Ks++s
     hk08207   836 MGALVACTRGTPLDTEVPMERVFDYSEYWEGARGLYAAFDCTATMKSGNS 885  

                   EVYlHEiPGGQyTNLqfQAksLGLGdrWeeVKkAYReANqllGDIVKVTP
                   +VY++EiPGGQyTNL fQA s+GLG ++ eVKkAY eANq+lGD +KVTP
     hk08207   886 DVYENEIPGGQYTNLHFQAHSMGLGSKFKEVKKAYVEANQMLGDLIKVTP 935  

                   SSKVVGDlAlfMVsNdLTedDVvekaeeLdFPdSVveflkGdIGQPhGGF
                   SSK+VGDlA+fMV+N L  +     aeeL+FP SVvefl+G IG PhGGF
     hk08207   936 SSKIVGDLAQFMVQNGLSRAEAEAQAEELSFPRSVVEFLQGYIGVPHGGF 985  

                   PEplrkkvLKgKekpiTvRPGelLePlDldkikkdlqekhereVSDrDva
                   PEp+r+kvLK+  ++ ++RPG++L PlDl ++ k+l  +h  eV   Dv 
     hk08207   986 PEPFRSKVLKD-LPRVEGRPGASLPPLDLQALEKELVDRHGEEVTPEDVL 1034 

                   SYalYPkVftDyvkardsYGdvSVLdTraFlyGlkvGEEiEVeIEkGKTL
                   S+a+YP Vf  +  ++ ++G+++ L Tr Fl G+k  EE+EVe E+GKTL
     hk08207  1035 SAAMYPDVFAHFKDFTATFGPLDSLNTRLFLQGPKIAEEFEVELERGKTL 1084 

                   iiKlqAvgdetksdGeReVyFELNGQpRkvkVkDrsakaeGvavrrKAdk
                    iK +Av+ ++   G R V+FELNGQ+R++ VkD  a +e  + ++KA k
     hk08207  1085 HIKALAVS-DLNRAGQRQVFFELNGQLRSILVKDTQAMKE-MHFHPKALK 1132 

                   gNpaHvGAPMPGvvieVkVeaGqkVnKGdpLvvleAMKMEtvvqaPkdGt
                     + ++GAPMPG vi +kV aG kV KG+pL vl+AMKMEtvv +P  Gt
     hk08207  1133 DVKGQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGT 1182 

                   vKeVlVkdGekidakDLLlvlE<-*
                   v  V+V   + +++ DL+l++E   
     hk08207  1183 VRKVHVTKDMTLEGDDLILEIE    1204 

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