hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-17372225/chunk_1/iprscan-20090525-17372225.nocrc
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Query sequence: hk09638
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00353                                                  68.6    8.1e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1     411   461 ..     1    61 []    68.6  8.1e-16

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 411 to 461: score 68.6, E = 8.1e-16
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      na+E+  r+R  iN+ ++ eL++lv       g   Kl+K ++Lr+A
     hk09638   411    NAIEK--RYRSSIND-KIIELKDLVV------GTEAKLNKSAVLRKA 448  

                   ieYIrksLqeqlqe<-*
                   i+YI ++Lq+ +q+   
     hk09638   449 IDYI-RFLQHSNQK    461  

//