# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk09858.fasta.nr -Q hk09858.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk09858, 514 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6825789 sequences Expectation_n fit: rho(ln(x))= 6.8889+/-0.00021; mu= 4.6510+/- 0.012 mean_var=159.6702+/-31.039, 0's: 37 Z-trim: 74 B-trim: 249 in 1/65 Lambda= 0.101499 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087756|dbj|BAD92325.1| synapsin II isoform II ( 514) 3507 525.4 1.2e-146 gi|19924101|ref|NP_003169.2| synapsin II isoform I ( 478) 2918 439.1 1.1e-120 gi|3511273|gb|AAC33789.1| synapsin IIb [Homo sapie ( 478) 2914 438.5 1.6e-120 gi|1594277|gb|AAC50718.1| synapsin IIb ( 478) 2907 437.5 3.3e-120 gi|114586127|ref|XP_001171832.1| PREDICTED: synaps ( 699) 2878 433.4 8.2e-119 gi|119584522|gb|EAW64118.1| synapsin II, isoform C ( 486) 2853 429.6 8.1e-118 gi|3860049|gb|AAC72966.1| synapsin IIb [Mus muscul ( 479) 2786 419.8 7.2e-115 gi|112350|pir||D30411 synapsin IIb - rat gi|14 ( 479) 2775 418.2 2.2e-114 gi|19924103|ref|NP_598328.1| synapsin II isoform I ( 582) 2771 417.7 3.8e-114 gi|30410990|gb|AAH51307.1| Synapsin II [Homo sapie ( 582) 2771 417.7 3.8e-114 gi|206836|gb|AAA42101.1| synapsin 2b gi|950716 ( 479) 2769 417.3 4e-114 gi|6686022|sp|Q92777|SYN2_HUMAN Synapsin-2 (Synaps ( 582) 2767 417.1 5.7e-114 gi|109034333|ref|XP_001086745.1| PREDICTED: simila ( 582) 2731 411.8 2.2e-112 gi|119584523|gb|EAW64119.1| synapsin II, isoform C ( 590) 2706 408.2 2.8e-111 gi|148667107|gb|EDK99523.1| synapsin II [Mus muscu ( 439) 2696 406.6 6.3e-111 gi|73984988|ref|XP_541766.2| PREDICTED: similar to ( 652) 2650 400.0 8.8e-109 gi|42406392|gb|AAH66004.1| Syn2 protein [Mus muscu ( 585) 2639 398.4 2.5e-108 gi|73920803|sp|Q64332|SYN2_MOUSE Synapsin-2 (Synap ( 586) 2639 398.4 2.5e-108 gi|6685997|sp|Q63537|SYN2_RAT Synapsin-2 (Synapsin ( 586) 2628 396.7 7.6e-108 gi|149049703|gb|EDM02157.1| synapsin II, isoform C ( 586) 2628 396.7 7.6e-108 gi|193787664|dbj|BAG52870.1| unnamed protein produ ( 514) 2516 380.3 6e-103 gi|29611412|gb|AAO16872.1| synapsin 2B [Takifugu r ( 466) 2242 340.1 6.7e-91 gi|49902801|gb|AAH75998.1| Synapsin IIa [Danio rer ( 463) 2218 336.6 7.6e-90 gi|194677398|ref|XP_001789269.1| PREDICTED: simila ( 565) 2192 332.9 1.2e-88 gi|149728438|ref|XP_001490724.1| PREDICTED: synaps ( 465) 2187 332.1 1.8e-88 gi|119584524|gb|EAW64120.1| synapsin II, isoform C ( 314) 2125 322.8 7.3e-86 gi|62471509|gb|AAH93548.1| MGC115109 protein [Xeno ( 432) 2111 320.9 3.8e-85 gi|149049704|gb|EDM02158.1| synapsin II, isoform C ( 314) 2085 317.0 4.2e-84 gi|51704134|gb|AAH81169.1| MGC84302 protein [Xenop ( 655) 2059 313.5 9.9e-83 gi|33357051|pdb|1I7L|A Chain A, Crystal Structure ( 309) 2037 309.9 5.5e-82 gi|26325170|dbj|BAC26339.1| unnamed protein produc ( 313) 2033 309.3 8.3e-82 gi|34850941|dbj|BAC87842.1| synapsin 2b [Seriola q ( 449) 2010 306.1 1.1e-80 gi|6449075|gb|AAF08809.1|AF192751_1 synapsin I [Xe ( 421) 2008 305.8 1.3e-80 gi|189442709|gb|AAI67591.1| Unknown (protein for M ( 580) 1988 303.0 1.2e-79 gi|119584521|gb|EAW64117.1| synapsin II, isoform C ( 418) 1978 301.4 2.7e-79 gi|167045804|gb|ABZ10473.1| synapsin III isoform I ( 580) 1973 300.8 5.6e-79 gi|126339657|ref|XP_001366228.1| PREDICTED: simila ( 583) 1961 299.1 1.9e-78 gi|159461557|gb|ABW96830.1| synapsin III, isoform ( 580) 1958 298.6 2.6e-78 gi|119580440|gb|EAW60036.1| synapsin III, isoform ( 562) 1956 298.3 3.1e-78 gi|6707726|sp|O14994|SYN3_HUMAN Synapsin-3 (Synaps ( 580) 1956 298.3 3.2e-78 gi|114686082|ref|XP_001153896.1| PREDICTED: synaps ( 444) 1954 297.9 3.2e-78 gi|73969240|ref|XP_850873.1| PREDICTED: similar to ( 579) 1954 298.0 3.9e-78 gi|119580441|gb|EAW60037.1| synapsin III, isoform ( 444) 1951 297.5 4.4e-78 gi|194667290|ref|XP_001790133.1| PREDICTED: simila ( 579) 1951 297.6 5.3e-78 gi|19924105|ref|NP_003481.2| synapsin III isoform ( 580) 1947 297.0 7.9e-78 gi|19924109|ref|NP_598344.1| synapsin III isoform ( 444) 1942 296.2 1.1e-77 gi|194226758|ref|XP_001916469.1| PREDICTED: simila ( 580) 1942 296.3 1.3e-77 gi|6449079|gb|AAF08811.1|AF192753_1 synapsin IIIa ( 580) 1936 295.4 2.4e-77 gi|119580437|gb|EAW60033.1| synapsin III, isoform ( 439) 1924 293.5 6.7e-77 gi|183986322|gb|AAI66156.1| Unknown (protein for M ( 656) 1885 288.0 4.7e-75 >>gi|62087756|dbj|BAD92325.1| synapsin II isoform IIb va (514 aa) initn: 3507 init1: 3507 opt: 3507 Z-score: 2787.7 bits: 525.4 E(): 1.2e-146 Smith-Waterman score: 3507; 100.000% identity (100.000% similar) in 514 aa overlap (1-514:1-514) 10 20 30 40 50 60 hk0985 GVWRRGLSLCWLSRRLSRLSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GVWRRGLSLCWLSRRLSRLSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDS 10 20 30 40 50 60 70 80 90 100 110 120 hk0985 SFIANLPNGYMTDLQRPEPQQPPPPPPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SFIANLPNGYMTDLQRPEPQQPPPPPPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFS 70 80 90 100 110 120 130 140 150 160 170 180 hk0985 SLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVE 130 140 150 160 170 180 190 200 210 220 230 240 hk0985 QAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIG 190 200 210 220 230 240 250 260 270 280 290 300 hk0985 MQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 MQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTF 250 260 270 280 290 300 310 320 330 340 350 360 hk0985 PVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYK 310 320 330 340 350 360 370 380 390 400 410 420 hk0985 AYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYI 370 380 390 400 410 420 430 440 450 460 470 480 hk0985 FEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPD 430 440 450 460 470 480 490 500 510 hk0985 SSKTPPQRPPPQGCLQYILDCNGIAVGPKQVQAS :::::::::::::::::::::::::::::::::: gi|620 SSKTPPQRPPPQGCLQYILDCNGIAVGPKQVQAS 490 500 510 >>gi|19924101|ref|NP_003169.2| synapsin II isoform IIb [ (478 aa) initn: 2890 init1: 2890 opt: 2918 Z-score: 2321.9 bits: 439.1 E(): 1.1e-120 Smith-Waterman score: 3131; 97.490% identity (97.490% similar) in 478 aa overlap (49-514:1-478) 20 30 40 50 60 70 hk0985 LSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPE :::::::::::::::::::::::::::::: gi|199 MMNFLRRRLSDSSFIANLPNGYMTDLQRPE 10 20 30 80 90 100 110 120 hk0985 PQQPPPPPPP------------TASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV :::::::::: :::::::::::::::::::::::::::::::::::::: gi|199 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV 40 50 60 70 80 90 130 140 150 160 170 180 hk0985 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE 100 110 120 130 140 150 190 200 210 220 230 240 hk0985 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL 160 170 180 190 200 210 250 260 270 280 290 300 hk0985 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI 220 230 240 250 260 270 310 320 330 340 350 360 hk0985 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS 280 290 300 310 320 330 370 380 390 400 410 420 hk0985 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC 340 350 360 370 380 390 430 440 450 460 470 480 hk0985 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP 400 410 420 430 440 450 490 500 510 hk0985 QRPPPQGCLQYILDCNGIAVGPKQVQAS :::::::::::::::::::::::::::: gi|199 QRPPPQGCLQYILDCNGIAVGPKQVQAS 460 470 >>gi|3511273|gb|AAC33789.1| synapsin IIb [Homo sapiens] (478 aa) initn: 2886 init1: 2886 opt: 2914 Z-score: 2318.8 bits: 438.5 E(): 1.6e-120 Smith-Waterman score: 3127; 97.280% identity (97.490% similar) in 478 aa overlap (49-514:1-478) 20 30 40 50 60 70 hk0985 LSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPE :::::::::::::::::::::::::::::: gi|351 MMNFLRRRLSDSSFIANLPNGYMTDLQRPE 10 20 30 80 90 100 110 120 hk0985 PQQPPPPPPP------------TASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV :::::::::: ::::::::.::::::::::::::::::::::::::::: gi|351 PQQPPPPPPPGPGAASASAAPPTASPGPERKPPPASAPAPQPAPTPSVGSSFFSSLSQAV 40 50 60 70 80 90 130 140 150 160 170 180 hk0985 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|351 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE 100 110 120 130 140 150 190 200 210 220 230 240 hk0985 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|351 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL 160 170 180 190 200 210 250 260 270 280 290 300 hk0985 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|351 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI 220 230 240 250 260 270 310 320 330 340 350 360 hk0985 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|351 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS 280 290 300 310 320 330 370 380 390 400 410 420 hk0985 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|351 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC 340 350 360 370 380 390 430 440 450 460 470 480 hk0985 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|351 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP 400 410 420 430 440 450 490 500 510 hk0985 QRPPPQGCLQYILDCNGIAVGPKQVQAS :::::::::::::::::::::::::::: gi|351 QRPPPQGCLQYILDCNGIAVGPKQVQAS 460 470 >>gi|1594277|gb|AAC50718.1| synapsin IIb (478 aa) initn: 2879 init1: 2879 opt: 2907 Z-score: 2313.2 bits: 437.5 E(): 3.3e-120 Smith-Waterman score: 3120; 97.280% identity (97.280% similar) in 478 aa overlap (49-514:1-478) 20 30 40 50 60 70 hk0985 LSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPE :::::::::::::::::::::::::::::: gi|159 MMNFLRRRLSDSSFIANLPNGYMTDLQRPE 10 20 30 80 90 100 110 120 hk0985 PQQPPPPPPP------------TASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV :::::::::: ::::::::::::::::: :::::::::::::::::::: gi|159 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAAQPAPTPSVGSSFFSSLSQAV 40 50 60 70 80 90 130 140 150 160 170 180 hk0985 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE 100 110 120 130 140 150 190 200 210 220 230 240 hk0985 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL 160 170 180 190 200 210 250 260 270 280 290 300 hk0985 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI 220 230 240 250 260 270 310 320 330 340 350 360 hk0985 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS 280 290 300 310 320 330 370 380 390 400 410 420 hk0985 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC 340 350 360 370 380 390 430 440 450 460 470 480 hk0985 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP 400 410 420 430 440 450 490 500 510 hk0985 QRPPPQGCLQYILDCNGIAVGPKQVQAS :::::::::::::::::::::::::::: gi|159 QRPPPQGCLQYILDCNGIAVGPKQVQAS 460 470 >>gi|114586127|ref|XP_001171832.1| PREDICTED: synapsin I (699 aa) initn: 2743 init1: 2743 opt: 2878 Z-score: 2288.2 bits: 433.4 E(): 8.2e-119 Smith-Waterman score: 3281; 96.825% identity (97.024% similar) in 504 aa overlap (1-493:81-581) 10 20 30 hk0985 GVWRRGLSLCWLSRRLSRLSRLNLAFRPRS :::::::::::::::.::: :::::::: gi|114 EDNFFSMYRYDKGKPSRRAACLAQSADAVCGVWRRGLSLCWLSRRISRL---NLAFRPRS 60 70 80 90 100 40 50 60 70 80 hk0985 PSAPPDPVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPP---- :::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSAPPDSVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPEPQQPPPPPAGPG 110 120 130 140 150 160 90 100 110 120 130 hk0985 -------PPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAP ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAVKQTAASAGLVDAP 170 180 190 200 210 220 140 150 160 170 180 190 hk0985 APAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSELNLVAHADGTYAV 230 240 250 260 270 280 200 210 220 230 240 250 hk0985 DMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGLPSINSLESIYNFC 290 300 310 320 330 340 260 270 280 290 300 310 hk0985 DKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKIGHAHSGMGKVKVE 350 360 370 380 390 400 320 330 340 350 360 370 hk0985 NHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAM 410 420 430 440 450 460 380 390 400 410 420 430 hk0985 LEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDCSMPLIGEHQVEDR 470 480 490 500 510 520 440 450 460 470 480 490 hk0985 QLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQGCLQYIL :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPPQRPPPQGMQPPGK 530 540 550 560 570 580 500 510 hk0985 DCNGIAVGPKQVQAS gi|114 VLPPRRLPPGPSLPPSSSSSSSSSSSAPQRPGGPTTHGDAPSSSSSLAEAQPPLAAPPQK 590 600 610 620 630 640 >>gi|119584522|gb|EAW64118.1| synapsin II, isoform CRA_b (486 aa) initn: 2773 init1: 2773 opt: 2853 Z-score: 2270.4 bits: 429.6 E(): 8.1e-118 Smith-Waterman score: 3094; 95.679% identity (95.679% similar) in 486 aa overlap (49-514:1-486) 20 30 40 50 60 70 hk0985 LSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPE :::::::::::::::::::::::::::::: gi|119 MMNFLRRRLSDSSFIANLPNGYMTDLQRPE 10 20 30 80 90 100 110 hk0985 PQQPPPPPPP------------TASPGPERRPPPASAPAPQPAP--------TPSVGSSF :::::::::: :::::::::::::::::::::: :::::::: gi|119 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPQPAPQPAPTPSVGSSF 40 50 60 70 80 90 120 130 140 150 160 170 hk0985 FSSLSQAVKQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIK :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|119 FSSLSQAVKQTAASAGLVDAPAAAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIK 100 110 120 130 140 150 180 190 200 210 220 230 hk0985 VEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VEQAEFSELNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLI 160 170 180 190 200 210 240 250 260 270 280 290 hk0985 IGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IGMQYAGLPSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLP 220 230 240 250 260 270 300 310 320 330 340 350 hk0985 TFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TFPVVVKIGHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNN 280 290 300 310 320 330 360 370 380 390 400 410 hk0985 YKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YKAYMRTSISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKD 340 350 360 370 380 390 420 430 440 450 460 470 hk0985 YIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YIFEVMDCSMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKD 400 410 420 430 440 450 480 490 500 510 hk0985 PDSSKTPPQRPPPQGCLQYILDCNGIAVGPKQVQAS :::::::::::::::::::::::::::::::::::: gi|119 PDSSKTPPQRPPPQGCLQYILDCNGIAVGPKQVQAS 460 470 480 >>gi|3860049|gb|AAC72966.1| synapsin IIb [Mus musculus] (479 aa) initn: 2785 init1: 2461 opt: 2786 Z-score: 2217.5 bits: 419.8 E(): 7.2e-115 Smith-Waterman score: 3019; 93.542% identity (96.458% similar) in 480 aa overlap (49-514:1-479) 20 30 40 50 60 70 hk0985 LSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPE :::::::::::::::::::::::::::::: gi|386 MMNFLRRRLSDSSFIANLPNGYMTDLQRPE 10 20 30 80 90 100 110 120 hk0985 PQQPPPPPPP----------TASPGPERRPPPASAPAPQPAP----TPSVGSSFFSSLSQ :::::: : : .::::::::::::.:::::::: :::::::::::::: gi|386 PQQPPPAPGPGAATASAATSAASPGPERRPPPAQAPAPQPAPQPAPTPSVGSSFFSSLSQ 40 50 60 70 80 90 130 140 150 160 170 180 hk0985 AVKQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEF :::::::::::::::::. ::.:::::::::::::.::::::::::.::::::::::::: gi|386 AVKQTAASAGLVDAPAPS-AASRKAKVLLVVDEPHTDWAKCFRGKKILGDYDIKVEQAEF 100 110 120 130 140 190 200 210 220 230 240 hk0985 SELNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYA :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|386 SELNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLVIGMQYA 150 160 170 180 190 200 250 260 270 280 290 300 hk0985 GLPSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVV :::::::::::::::::::::::.:::.:::::::::::::::::::.:::::::::::: gi|386 GLPSINSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHREMLTLPTFPVVV 210 220 230 240 250 260 310 320 330 340 350 360 hk0985 KIGHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMR :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|386 KIGHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDAKYDIRVQKIGNNYKAYMR 270 280 290 300 310 320 370 380 390 400 410 420 hk0985 TSISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVM ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|386 TSISGNWKTNTGSAMLEQIAMSDRYKLWVDACSEMFGGLDICAVKAVHGKDGKDYIFEVM 330 340 350 360 370 380 430 440 450 460 470 480 hk0985 DCSMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKT :::::::::::::::::::.:::::::::::::::::::::::::::::::::.:::::: gi|386 DCSMPLIGEHQVEDRQLITDLVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKEPDSSKT 390 400 410 420 430 440 490 500 510 hk0985 PPQRPPPQGCLQYILDCNGIAVGPKQVQAS :::::::::::::::::::::::::::::: gi|386 PPQRPPPQGCLQYILDCNGIAVGPKQVQAS 450 460 470 >>gi|112350|pir||D30411 synapsin IIb - rat gi|149049 (479 aa) initn: 2769 init1: 2450 opt: 2775 Z-score: 2208.8 bits: 418.2 E(): 2.2e-114 Smith-Waterman score: 3008; 93.333% identity (96.250% similar) in 480 aa overlap (49-514:1-479) 20 30 40 50 60 70 hk0985 LSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPE :::::::::::::::::::::::::::::: gi|112 MMNFLRRRLSDSSFIANLPNGYMTDLQRPE 10 20 30 80 90 100 110 120 hk0985 PQQPPPPPPP----------TASPGPERRPPPASAPAPQPAP----TPSVGSSFFSSLSQ :::::: : : .::::::::::::.:::::::: :::::::::::::: gi|112 PQQPPPAPGPGTATASAATSAASPGPERRPPPAQAPAPQPAPQPAPTPSVGSSFFSSLSQ 40 50 60 70 80 90 130 140 150 160 170 180 hk0985 AVKQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEF :::::::::::::::::. ::.:::::::::::::.::::::::::.::::::::::::: gi|112 AVKQTAASAGLVDAPAPS-AASRKAKVLLVVDEPHTDWAKCFRGKKILGDYDIKVEQAEF 100 110 120 130 140 190 200 210 220 230 240 hk0985 SELNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYA :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|112 SELNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLVIGMQYA 150 160 170 180 190 200 250 260 270 280 290 300 hk0985 GLPSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVV :::::::::::::::::::::::.:::.:::::::::::::::::::.:::::::::::: gi|112 GLPSINSLESIYNFCDKPWVFAQMVAIFKTLGGEKFPLIEQTYYPNHREMLTLPTFPVVV 210 220 230 240 250 260 310 320 330 340 350 360 hk0985 KIGHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMR :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|112 KIGHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDAKYDIRVQKIGNNYKAYMR 270 280 290 300 310 320 370 380 390 400 410 420 hk0985 TSISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVM ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|112 TSISGNWKTNTGSAMLEQIAMSDRYKLWVDACSEMFGGLDICAVKAVHGKDGKDYIFEVM 330 340 350 360 370 380 430 440 450 460 470 480 hk0985 DCSMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKT :::::::::::::::::::.:::::::::::::::::::::::::::::::::.:::::: gi|112 DCSMPLIGEHQVEDRQLITDLVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKEPDSSKT 390 400 410 420 430 440 490 500 510 hk0985 PPQRPPPQGCLQYILDCNGIAVGPKQVQAS ::::: :::::::::::::::::::::::: gi|112 PPQRPAPQGCLQYILDCNGIAVGPKQVQAS 450 460 470 >>gi|19924103|ref|NP_598328.1| synapsin II isoform IIa [ (582 aa) initn: 2743 init1: 2743 opt: 2771 Z-score: 2204.5 bits: 417.7 E(): 3.8e-114 Smith-Waterman score: 2984; 97.374% identity (97.374% similar) in 457 aa overlap (49-493:1-457) 20 30 40 50 60 70 hk0985 LSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPE :::::::::::::::::::::::::::::: gi|199 MMNFLRRRLSDSSFIANLPNGYMTDLQRPE 10 20 30 80 90 100 110 120 hk0985 PQQPPPPPPP------------TASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV :::::::::: :::::::::::::::::::::::::::::::::::::: gi|199 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV 40 50 60 70 80 90 130 140 150 160 170 180 hk0985 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE 100 110 120 130 140 150 190 200 210 220 230 240 hk0985 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL 160 170 180 190 200 210 250 260 270 280 290 300 hk0985 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI 220 230 240 250 260 270 310 320 330 340 350 360 hk0985 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS 280 290 300 310 320 330 370 380 390 400 410 420 hk0985 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC 340 350 360 370 380 390 430 440 450 460 470 480 hk0985 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP 400 410 420 430 440 450 490 500 510 hk0985 QRPPPQGCLQYILDCNGIAVGPKQVQAS ::::::: gi|199 QRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLPPSSSSSSSSSSSAPQRPGGPTTHGDA 460 470 480 490 500 510 >>gi|30410990|gb|AAH51307.1| Synapsin II [Homo sapiens] (582 aa) initn: 2743 init1: 2743 opt: 2771 Z-score: 2204.5 bits: 417.7 E(): 3.8e-114 Smith-Waterman score: 2984; 97.374% identity (97.374% similar) in 457 aa overlap (49-493:1-457) 20 30 40 50 60 70 hk0985 LSRLNLAFRPRSPSAPPDPVAPRAPSPLSQMMNFLRRRLSDSSFIANLPNGYMTDLQRPE :::::::::::::::::::::::::::::: gi|304 MMNFLRRRLSDSSFIANLPNGYMTDLQRPE 10 20 30 80 90 100 110 120 hk0985 PQQPPPPPPP------------TASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV :::::::::: :::::::::::::::::::::::::::::::::::::: gi|304 PQQPPPPPPPGPGAASASAAPPTASPGPERRPPPASAPAPQPAPTPSVGSSFFSSLSQAV 40 50 60 70 80 90 130 140 150 160 170 180 hk0985 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 KQTAASAGLVDAPAPAPAAARKAKVLLVVDEPHADWAKCFRGKKVLGDYDIKVEQAEFSE 100 110 120 130 140 150 190 200 210 220 230 240 hk0985 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 LNLVAHADGTYAVDMQVLRNGTKVVRSFRPDFVLIRQHAFGMAENEDFRHLIIGMQYAGL 160 170 180 190 200 210 250 260 270 280 290 300 hk0985 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 PSINSLESIYNFCDKPWVFAQLVAIYKTLGGEKFPLIEQTYYPNHKEMLTLPTFPVVVKI 220 230 240 250 260 270 310 320 330 340 350 360 hk0985 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 GHAHSGMGKVKVENHYDFQDIASVVALTQTYATAEPFIDSKYDIRVQKIGNNYKAYMRTS 280 290 300 310 320 330 370 380 390 400 410 420 hk0985 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 ISGNWKTNTGSAMLEQIAMSDRYKLWVDTCSEMFGGLDICAVKAVHGKDGKDYIFEVMDC 340 350 360 370 380 390 430 440 450 460 470 480 hk0985 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|304 SMPLIGEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSKTPP 400 410 420 430 440 450 490 500 510 hk0985 QRPPPQGCLQYILDCNGIAVGPKQVQAS ::::::: gi|304 QRPPPQGGPGQPQGMQPPGKVLPPRRLPPGPSLPPSSSSSSSSSSSAPQRPGGPTAHGDA 460 470 480 490 500 510 514 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 13 02:29:55 2008 done: Wed Aug 13 02:32:13 2008 Total Scan time: 878.720 Total Display time: 0.160 Function used was FASTA [version 34.26.5 April 26, 2007]