# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohk09982.fasta.nr -Q hk09982.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hk09982, 680 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6840581 sequences Expectation_n fit: rho(ln(x))= 5.3869+/-0.000184; mu= 11.8686+/- 0.010 mean_var=83.4904+/-16.619, 0's: 44 Z-trim: 61 B-trim: 6 in 1/64 Lambda= 0.140364 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|3410696|emb|CAA06251.1| cell cycle checkpoint p ( 670) 4471 915.5 0 gi|60835624|gb|AAX37147.1| RAD17-like [synthetic c ( 671) 4471 915.5 0 gi|31873384|emb|CAD97683.1| hypothetical protein [ ( 670) 4470 915.3 0 gi|4102916|gb|AAD01620.1| cell cycle checkpoint pr ( 670) 4467 914.7 0 gi|5059034|gb|AAD38878.1|AF112263_1 hRad17 protein ( 670) 4463 913.9 0 gi|60654471|gb|AAX29926.1| RAD17 [synthetic constr ( 671) 4463 913.9 0 gi|62287484|sp|O75943|RAD17_HUMAN Cell cycle check ( 681) 4453 911.9 0 gi|55624222|ref|XP_517725.1| PREDICTED: hypothetic ( 670) 4433 907.8 0 gi|114599886|ref|XP_001158997.1| PREDICTED: RAD17 ( 681) 4415 904.2 0 gi|3641289|gb|AAC36334.1| RF-C/activator 1 homolog ( 681) 4410 903.2 0 gi|62287489|sp|Q5R652.1|RAD17_PONAB Cell cycle che ( 681) 4384 897.9 0 gi|109077489|ref|XP_001092701.1| PREDICTED: simila ( 670) 4367 894.5 0 gi|109077487|ref|XP_001092469.1| PREDICTED: simila ( 681) 4349 890.8 0 gi|62287510|sp|Q9XT62|RAD17_CERAE Cell cycle check ( 670) 4341 889.2 0 gi|119571666|gb|EAW51281.1| RAD17 homolog (S. pomb ( 655) 4270 874.8 0 gi|151553606|gb|AAI48876.1| RAD17 protein [Bos tau ( 682) 3980 816.1 0 gi|73950127|ref|XP_535265.2| PREDICTED: similar to ( 680) 3952 810.4 0 gi|149726555|ref|XP_001504750.1| PREDICTED: RAD17 ( 682) 3918 803.5 0 gi|4050044|gb|AAC97951.1| RAD17 isoform 4 [Homo sa ( 584) 3882 796.2 0 gi|114599888|ref|XP_001158952.1| PREDICTED: RAD17 ( 584) 3849 789.5 0 gi|109077503|ref|XP_001092819.1| PREDICTED: simila ( 584) 3808 781.2 0 gi|114599896|ref|XP_001158903.1| PREDICTED: hypoth ( 565) 3739 767.2 0 gi|62287500|sp|Q6NXW6|RAD17_MOUSE Cell cycle check ( 688) 3644 748.1 2.1e-213 gi|44890691|gb|AAH66855.1| RAD17 homolog (S. pombe ( 688) 3615 742.2 1.2e-211 gi|66910935|gb|AAH98057.1| RAD17 homolog (S. pombe ( 686) 3613 741.8 1.6e-211 gi|3758878|emb|CAA09868.1| cell cycle checkpoint p ( 687) 3609 741.0 2.8e-211 gi|4050042|gb|AAC97950.1| RAD17 isoform 3 [Homo sa ( 505) 3358 690.0 4.5e-196 gi|114599892|ref|XP_001158855.1| PREDICTED: RAD17 ( 505) 3325 683.3 4.6e-194 gi|149408523|ref|XP_001512393.1| PREDICTED: simila ( 679) 3201 658.3 2.1e-186 gi|119571674|gb|EAW51289.1| RAD17 homolog (S. pomb ( 490) 3157 649.3 7.8e-184 gi|109077505|ref|XP_001092354.1| PREDICTED: simila ( 471) 3085 634.7 1.9e-179 gi|46395284|dbj|BAD16574.1| Rad17 [Gallus gallus] ( 694) 2597 536.0 1.4e-149 gi|53133382|emb|CAG32020.1| hypothetical protein [ ( 693) 2595 535.6 1.8e-149 gi|30060003|gb|AAP13338.1| RFC-like DNA checkpoint ( 674) 2561 528.7 2.1e-147 gi|47937773|gb|AAH72343.1| Rad17 protein [Xenopus ( 674) 2557 527.9 3.7e-147 gi|28848618|gb|AAO13093.1| Rad17 [Xenopus laevis] ( 674) 2533 523.1 1.1e-145 gi|49901334|gb|AAH76494.1| RAD17 homolog (S. pombe ( 665) 2093 434.0 7.2e-119 gi|122890956|emb|CAM14036.1| novel protein (zgc:91 ( 666) 2093 434.0 7.2e-119 gi|149059197|gb|EDM10204.1| RAD17 homolog (S. pomb ( 330) 1767 367.7 3.1e-99 gi|156213475|gb|EDO34493.1| predicted protein [Nem ( 513) 1482 310.1 1e-81 gi|47214987|emb|CAG01321.1| unnamed protein produc (1657) 1396 293.1 4.4e-76 gi|190589215|gb|EDV29237.1| hypothetical protein T ( 457) 1031 218.8 3e-54 gi|115627991|ref|XP_787106.2| PREDICTED: similar t ( 598) 816 175.3 4.6e-41 gi|119571664|gb|EAW51279.1| RAD17 homolog (S. pomb ( 102) 668 144.7 1.3e-32 gi|108876412|gb|EAT40637.1| cell cycle checkpoint (1080) 549 121.5 1.4e-24 gi|162673727|gb|EDQ60246.1| predicted protein [Phy ( 501) 511 113.5 1.6e-22 gi|167876845|gb|EDS40228.1| cell cycle checkpoint ( 530) 502 111.7 5.8e-22 gi|116127817|gb|EAA10117.2| AGAP008673-PA [Anophel ( 408) 486 108.4 4.5e-21 gi|119403153|gb|EAW13571.1| cell cycle checkpoint ( 770) 435 98.3 9.4e-18 gi|157354831|emb|CAO48177.1| unnamed protein produ ( 605) 398 90.7 1.4e-15 >>gi|3410696|emb|CAA06251.1| cell cycle checkpoint prote (670 aa) initn: 4471 init1: 4471 opt: 4471 Z-score: 4891.8 bits: 915.5 E(): 0 Smith-Waterman score: 4471; 100.000% identity (100.000% similar) in 670 aa overlap (11-680:1-670) 10 20 30 40 50 60 hk0998 YQSQSFDEDEMNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF 10 20 30 40 50 70 80 90 100 110 120 hk0998 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV 60 70 80 90 100 110 130 140 150 160 170 180 hk0998 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE 120 130 140 150 160 170 190 200 210 220 230 240 hk0998 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE 180 190 200 210 220 230 250 260 270 280 290 300 hk0998 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR 240 250 260 270 280 290 310 320 330 340 350 360 hk0998 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK 300 310 320 330 340 350 370 380 390 400 410 420 hk0998 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS 360 370 380 390 400 410 430 440 450 460 470 480 hk0998 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS 420 430 440 450 460 470 490 500 510 520 530 540 hk0998 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL 480 490 500 510 520 530 550 560 570 580 590 600 hk0998 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL 540 550 560 570 580 590 610 620 630 640 650 660 hk0998 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|341 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF 600 610 620 630 640 650 670 680 hk0998 SAQGDMEENIIIEDYESDGT :::::::::::::::::::: gi|341 SAQGDMEENIIIEDYESDGT 660 670 >>gi|60835624|gb|AAX37147.1| RAD17-like [synthetic const (671 aa) initn: 4471 init1: 4471 opt: 4471 Z-score: 4891.8 bits: 915.5 E(): 0 Smith-Waterman score: 4471; 100.000% identity (100.000% similar) in 670 aa overlap (11-680:1-670) 10 20 30 40 50 60 hk0998 YQSQSFDEDEMNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF 10 20 30 40 50 70 80 90 100 110 120 hk0998 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV 60 70 80 90 100 110 130 140 150 160 170 180 hk0998 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE 120 130 140 150 160 170 190 200 210 220 230 240 hk0998 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE 180 190 200 210 220 230 250 260 270 280 290 300 hk0998 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR 240 250 260 270 280 290 310 320 330 340 350 360 hk0998 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK 300 310 320 330 340 350 370 380 390 400 410 420 hk0998 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS 360 370 380 390 400 410 430 440 450 460 470 480 hk0998 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS 420 430 440 450 460 470 490 500 510 520 530 540 hk0998 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL 480 490 500 510 520 530 550 560 570 580 590 600 hk0998 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL 540 550 560 570 580 590 610 620 630 640 650 660 hk0998 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF 600 610 620 630 640 650 670 680 hk0998 SAQGDMEENIIIEDYESDGT :::::::::::::::::::: gi|608 SAQGDMEENIIIEDYESDGTL 660 670 >>gi|31873384|emb|CAD97683.1| hypothetical protein [Homo (670 aa) initn: 4470 init1: 4470 opt: 4470 Z-score: 4890.7 bits: 915.3 E(): 0 Smith-Waterman score: 4470; 99.851% identity (100.000% similar) in 670 aa overlap (11-680:1-670) 10 20 30 40 50 60 hk0998 YQSQSFDEDEMNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF 10 20 30 40 50 70 80 90 100 110 120 hk0998 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|318 PARKRGNLSSLEQVYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV 60 70 80 90 100 110 130 140 150 160 170 180 hk0998 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE 120 130 140 150 160 170 190 200 210 220 230 240 hk0998 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE 180 190 200 210 220 230 250 260 270 280 290 300 hk0998 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR 240 250 260 270 280 290 310 320 330 340 350 360 hk0998 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK 300 310 320 330 340 350 370 380 390 400 410 420 hk0998 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS 360 370 380 390 400 410 430 440 450 460 470 480 hk0998 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS 420 430 440 450 460 470 490 500 510 520 530 540 hk0998 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL 480 490 500 510 520 530 550 560 570 580 590 600 hk0998 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL 540 550 560 570 580 590 610 620 630 640 650 660 hk0998 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|318 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF 600 610 620 630 640 650 670 680 hk0998 SAQGDMEENIIIEDYESDGT :::::::::::::::::::: gi|318 SAQGDMEENIIIEDYESDGT 660 670 >>gi|4102916|gb|AAD01620.1| cell cycle checkpoint protei (670 aa) initn: 4467 init1: 4467 opt: 4467 Z-score: 4887.4 bits: 914.7 E(): 0 Smith-Waterman score: 4467; 99.851% identity (100.000% similar) in 670 aa overlap (11-680:1-670) 10 20 30 40 50 60 hk0998 YQSQSFDEDEMNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF 10 20 30 40 50 70 80 90 100 110 120 hk0998 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV 60 70 80 90 100 110 130 140 150 160 170 180 hk0998 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE 120 130 140 150 160 170 190 200 210 220 230 240 hk0998 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|410 SSFHMFPYQSQISVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE 180 190 200 210 220 230 250 260 270 280 290 300 hk0998 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR 240 250 260 270 280 290 310 320 330 340 350 360 hk0998 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK 300 310 320 330 340 350 370 380 390 400 410 420 hk0998 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS 360 370 380 390 400 410 430 440 450 460 470 480 hk0998 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS 420 430 440 450 460 470 490 500 510 520 530 540 hk0998 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL 480 490 500 510 520 530 550 560 570 580 590 600 hk0998 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL 540 550 560 570 580 590 610 620 630 640 650 660 hk0998 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF 600 610 620 630 640 650 670 680 hk0998 SAQGDMEENIIIEDYESDGT :::::::::::::::::::: gi|410 SAQGDMEENIIIEDYESDGT 660 670 >>gi|5059034|gb|AAD38878.1|AF112263_1 hRad17 protein [Ho (670 aa) initn: 4463 init1: 4463 opt: 4463 Z-score: 4883.0 bits: 913.9 E(): 0 Smith-Waterman score: 4463; 99.851% identity (99.851% similar) in 670 aa overlap (11-680:1-670) 10 20 30 40 50 60 hk0998 YQSQSFDEDEMNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF 10 20 30 40 50 70 80 90 100 110 120 hk0998 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV 60 70 80 90 100 110 130 140 150 160 170 180 hk0998 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE 120 130 140 150 160 170 190 200 210 220 230 240 hk0998 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE 180 190 200 210 220 230 250 260 270 280 290 300 hk0998 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR 240 250 260 270 280 290 310 320 330 340 350 360 hk0998 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK 300 310 320 330 340 350 370 380 390 400 410 420 hk0998 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS 360 370 380 390 400 410 430 440 450 460 470 480 hk0998 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS 420 430 440 450 460 470 490 500 510 520 530 540 hk0998 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL 480 490 500 510 520 530 550 560 570 580 590 600 hk0998 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|505 AAKALFPDFCLPALCRQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL 540 550 560 570 580 590 610 620 630 640 650 660 hk0998 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|505 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF 600 610 620 630 640 650 670 680 hk0998 SAQGDMEENIIIEDYESDGT :::::::::::::::::::: gi|505 SAQGDMEENIIIEDYESDGT 660 670 >>gi|60654471|gb|AAX29926.1| RAD17 [synthetic construct] (671 aa) initn: 4463 init1: 4463 opt: 4463 Z-score: 4883.0 bits: 913.9 E(): 0 Smith-Waterman score: 4463; 99.851% identity (99.851% similar) in 670 aa overlap (11-680:1-670) 10 20 30 40 50 60 hk0998 YQSQSFDEDEMNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 MNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF 10 20 30 40 50 70 80 90 100 110 120 hk0998 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV 60 70 80 90 100 110 130 140 150 160 170 180 hk0998 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE 120 130 140 150 160 170 190 200 210 220 230 240 hk0998 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE 180 190 200 210 220 230 250 260 270 280 290 300 hk0998 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR 240 250 260 270 280 290 310 320 330 340 350 360 hk0998 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK 300 310 320 330 340 350 370 380 390 400 410 420 hk0998 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS 360 370 380 390 400 410 430 440 450 460 470 480 hk0998 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS 420 430 440 450 460 470 490 500 510 520 530 540 hk0998 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL 480 490 500 510 520 530 550 560 570 580 590 600 hk0998 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|606 AAKALFPDFCLPALCRQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL 540 550 560 570 580 590 610 620 630 640 650 660 hk0998 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF 600 610 620 630 640 650 670 680 hk0998 SAQGDMEENIIIEDYESDGT :::::::::::::::::::: gi|606 SAQGDMEENIIIEDYESDGTL 660 670 >>gi|62287484|sp|O75943|RAD17_HUMAN Cell cycle checkpoin (681 aa) initn: 4452 init1: 4452 opt: 4453 Z-score: 4872.0 bits: 911.9 E(): 0 Smith-Waterman score: 4453; 98.382% identity (99.412% similar) in 680 aa overlap (3-680:2-681) 10 20 30 40 50 hk0998 YQSQSFDEDEMN--QVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESS :..: . ... .::::::::::::::::::::::::::::::::::::::::::::: gi|622 MSKTFLRPKVSSTKVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESS 10 20 30 40 50 60 70 80 90 100 110 hk0998 RFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 RFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKA 60 70 80 90 100 110 120 130 140 150 160 170 hk0998 QVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 QVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFN 120 130 140 150 160 170 180 190 200 210 220 230 hk0998 TESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 TESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTL 180 190 200 210 220 230 240 250 260 270 280 290 hk0998 HEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 HEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFL 240 250 260 270 280 290 300 310 320 330 340 350 hk0998 NRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 NRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMS 300 310 320 330 340 350 360 370 380 390 400 410 hk0998 LKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 LKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRL 360 370 380 390 400 410 420 430 440 450 460 470 hk0998 PSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 PSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 420 430 440 450 460 470 480 490 500 510 520 530 hk0998 LSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYREN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 LSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYREN 480 490 500 510 520 530 540 550 560 570 580 590 hk0998 CLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 CLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKME 540 550 560 570 580 590 600 610 620 630 640 650 hk0998 ALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 ALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQ 600 610 620 630 640 650 660 670 680 hk0998 PFSAQGDMEENIIIEDYESDGT :::::::::::::::::::::: gi|622 PFSAQGDMEENIIIEDYESDGT 660 670 680 >>gi|55624222|ref|XP_517725.1| PREDICTED: hypothetical p (670 aa) initn: 4433 init1: 4433 opt: 4433 Z-score: 4850.2 bits: 907.8 E(): 0 Smith-Waterman score: 4433; 99.104% identity (99.701% similar) in 670 aa overlap (11-680:1-670) 10 20 30 40 50 60 hk0998 YQSQSFDEDEMNQVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESSRF ::::::::::::::::::.::::::::::::::::::::::::::::::: gi|556 MNQVTDWVDPSFDDFLECGGVSTITATSLGVNNSSHRRKNGPSTLESSRF 10 20 30 40 50 70 80 90 100 110 120 hk0998 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 PARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKAQV 60 70 80 90 100 110 130 140 150 160 170 180 hk0998 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 LERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFNTE 120 130 140 150 160 170 190 200 210 220 230 240 hk0998 SSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|556 SSFHMFPYQSQIAVFEEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTLHE 180 190 200 210 220 230 250 260 270 280 290 300 hk0998 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 VLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFLNR 240 250 260 270 280 290 310 320 330 340 350 360 hk0998 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMSLK :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: gi|556 IVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPTKKGMSLK 300 310 320 330 340 350 370 380 390 400 410 420 hk0998 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRLPS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|556 SDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPQLPS 360 370 380 390 400 410 430 440 450 460 470 480 hk0998 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 HLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADILS 420 430 440 450 460 470 490 500 510 520 530 540 hk0998 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 GDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYRENCL 480 490 500 510 520 530 550 560 570 580 590 600 hk0998 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 AAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKMEAL 540 550 560 570 580 590 610 620 630 640 650 660 hk0998 TDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQPF :::::::::: ::::::::::::::::::::::::.:::::::::::::::::::::::: gi|556 TDREHGMIDPGSGDEAQLNGGHSAEESLGEPTQATAPETWSLPLSQNSASELPASQPQPF 600 610 620 630 640 650 670 680 hk0998 SAQGDMEENIIIEDYESDGT :::::::::::::::::::: gi|556 SAQGDMEENIIIEDYESDGT 660 670 >>gi|114599886|ref|XP_001158997.1| PREDICTED: RAD17 homo (681 aa) initn: 4414 init1: 4414 opt: 4415 Z-score: 4830.4 bits: 904.2 E(): 0 Smith-Waterman score: 4415; 97.500% identity (99.118% similar) in 680 aa overlap (3-680:2-681) 10 20 30 40 50 hk0998 YQSQSFDEDEMN--QVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESS :..: . ... .:::::::::::::::.::::::::::::::::::::::::::::: gi|114 MSKTFLRPKVSSTKVTDWVDPSFDDFLECGGVSTITATSLGVNNSSHRRKNGPSTLESS 10 20 30 40 50 60 70 80 90 100 110 hk0998 RFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKA 60 70 80 90 100 110 120 130 140 150 160 170 hk0998 QVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFN 120 130 140 150 160 170 180 190 200 210 220 230 hk0998 TESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTL :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|114 TESSFHMFPYQSQIAVFEEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTL 180 190 200 210 220 230 240 250 260 270 280 290 hk0998 HEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFL 240 250 260 270 280 290 300 310 320 330 340 350 hk0998 NRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMS :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|114 NRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPTKKGMS 300 310 320 330 340 350 360 370 380 390 400 410 hk0998 LKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|114 LKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPQL 360 370 380 390 400 410 420 430 440 450 460 470 hk0998 PSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI 420 430 440 450 460 470 480 490 500 510 520 530 hk0998 LSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYREN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYREN 480 490 500 510 520 530 540 550 560 570 580 590 hk0998 CLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 CLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKME 540 550 560 570 580 590 600 610 620 630 640 650 hk0998 ALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQ :::::::::::: ::::::::::::::::::::::::.:::::::::::::::::::::: gi|114 ALTDREHGMIDPGSGDEAQLNGGHSAEESLGEPTQATAPETWSLPLSQNSASELPASQPQ 600 610 620 630 640 650 660 670 680 hk0998 PFSAQGDMEENIIIEDYESDGT :::::::::::::::::::::: gi|114 PFSAQGDMEENIIIEDYESDGT 660 670 680 >>gi|3641289|gb|AAC36334.1| RF-C/activator 1 homolog [Ho (681 aa) initn: 4409 init1: 4409 opt: 4410 Z-score: 4824.9 bits: 903.2 E(): 0 Smith-Waterman score: 4410; 97.500% identity (98.971% similar) in 680 aa overlap (3-680:2-681) 10 20 30 40 50 hk0998 YQSQSFDEDEMN--QVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESS :..: . ... .::::::::::::::::::::::::::::::::::::::::::::: gi|364 MSKTFLRPKVSSTKVTDWVDPSFDDFLECSGVSTITATSLGVNNSSHRRKNGPSTLESS 10 20 30 40 50 60 70 80 90 100 110 hk0998 RFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|364 RFPARKRGNLSSLEQIYGLENSKEYLSENEPWVDKYKPETQHELAVHKKKIEEVETWLKA 60 70 80 90 100 110 120 130 140 150 160 170 hk0998 QVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|364 QVLERQPKQGGSILLITGPPGCGKTTTLKILSKEHGIQVQEWINPVLPDFQKDDFKGMFN 120 130 140 150 160 170 180 190 200 210 220 230 hk0998 TESSFHMFPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTL :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|364 TESSFHMLPYQSQIAVFKEFLLRATKYNKLQMLGDDLRTDKKIILVEDLPNQFYRDSHTL 180 190 200 210 220 230 240 250 260 270 280 290 hk0998 HEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|364 HEVLRKYVRIGRCPLIFIISDSLSGDNNQRLLFPKEIQEECSISNISFNPVAPTIMMKFL 240 250 260 270 280 290 300 310 320 330 340 350 hk0998 NRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSLQFSSSKGENNLRPRKKGMS :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|364 NRIVTIEANKNGGKITVPDKTSLELLCQGCSGDIRSAINSPQFSSSKGENNLRPRKKGMS 300 310 320 330 340 350 360 370 380 390 400 410 hk0998 LKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|364 LKSDAVLSKSKRRKKPDRVFENQEVQAIGGKDVSLFLFRALGKILYCKRASLTELDSPRL 360 370 380 390 400 410 420 430 440 450 460 470 hk0998 PSHLSEYERDTLLVEPEEVVEMSHMPGDLFNLYLHQNYIDFFMEIDDIVRASEFLSFADI ::::::::::::::::::::::::: :::::::::::::::: ::::::::::::::::: gi|364 PSHLSEYERDTLLVEPEEVVEMSHMSGDLFNLYLHQNYIDFFTEIDDIVRASEFLSFADI 420 430 440 450 460 470 480 490 500 510 520 530 hk0998 LSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYREN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|364 LSGDWNTRSLLREYSTSIATRGVMHSNKARGYAHCQGGGSSFRPLHKPQWFLINKKYREN 480 490 500 510 520 530 540 550 560 570 580 590 hk0998 CLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|364 CLAAKALFPDFCLPALCLQTQLLPYLALLTIPMRNQAQISFIQDIGRLPLKRHFGRLKME 540 550 560 570 580 590 600 610 620 630 640 650 hk0998 ALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQNSASELPASQPQ ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|364 ALTDREHGMIDPDSGDEAQLNGGHSAEESLGEPTQATVPETWSLPLSQDSASELPASQPQ 600 610 620 630 640 650 660 670 680 hk0998 PFSAQGDMEENIIIEDYESDGT ::::::::::::.::::::::: gi|364 PFSAQGDMEENIMIEDYESDGT 660 670 680 680 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 13 02:41:14 2008 done: Wed Aug 13 02:43:11 2008 Total Scan time: 945.700 Total Display time: 0.300 Function used was FASTA [version 34.26.5 April 26, 2007]