hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-03014930/chunk_1/iprscan-20080813-03014930.nocrc
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Query sequence: hk10145
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00360                                                 127.5    1.5e-33   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/2     106   177 ..     1   121 []    74.7  1.2e-17
SM00360    2/2     193   259 ..     1   121 []    52.8  4.4e-11

Alignments of top-scoring domains:
SM00360: domain 1 of 2, from 106 to 177: score 74.7, E = 1.2e-17
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                       l+V +L  p+++te+dL+e+F              s fG+v  v++
     hk10145   106    DLIVLGL--PWKTTEQDLKEYF--------------STFGEVLMVQV 136  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                    +d +                     TG skGf+FV+F + e   k+  +
     hk10145   137 KKDLK---------------------TGHSKGFGFVRFTEYETQVKV--M 163  

                   ealnaskGkeledgGrptlglrVe<-*
                   ++ +     ++  +Gr    + ++   
     hk10145   164 SQRH-----MI--DGRW---CDCK    177  

SM00360: domain 2 of 2, from 193 to 259: score 52.8, E = 4.4e-11
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      ++fVg     +d+te++Lre+F              s++G+v +v i
     hk10145   193    KVFVGRC--TEDMTEDELREFF--------------SQYGDVMDVFI 223  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   ++                            + faFV+F+d + A+    +
     hk10145   224 PKPF--------------------------RAFAFVTFADDQIAQSL--C 245  

                   ealnaskGkeledgGrptlglrVe<-*
                      +      +  +G     ++++   
     hk10145   246 -GED----LII--KGIS---VHIS    259  

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