hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-17381731/chunk_1/iprscan-20090416-17381731.nocrc
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Query sequence: pf01112
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
TIGR00231 small_GTP: small GTP-binding protein domain   108.8    5.2e-30   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
TIGR00231   1/1       7   168 ..     1   186 []   108.8  5.2e-30

Alignments of top-scoring domains:
TIGR00231: domain 1 of 1, from 7 to 168: score 108.8, E = 5.2e-30
                   *->lkdikigivGdpnvGkstllnrllgnkgsitesgptdgttrdyvtes
                      +  +ki+++G  +vGk++l+ r+++   ++   g+  +++ d+    
     pf01112     7    DFLFKIVLIGNAGVGKTCLVRRFTQGL-FPPGQGA--TIGVDFMIKT 50   

                   ieedgktitgatfqWgykfnllDtpGlhrqedydalrrlyypevlsslev
                   +e++g++         +k++++Dt+G   qe+++ +++ yy+ +++++ +
     pf01112    51 VEINGEK---------VKLQIWDTAG---QERFRSITQSYYRSANALILT 88   

                   ldlvilvldvedglekdtkeiihhadkygvpillvgnkidlkdekpgyfv
                   +d++   ++++  + ++++ei+ +a   +v ++lvgnkidl  ++     
     pf01112    89 YDITCE-ESFRCLP-EWLREIEQYAS-NKVITVLVGNKIDLAERR----- 130  

                   dlkphlaslfaklngephfiplsaetgkgidslfglvea<-*
                   +++ + a++f++ +    ++++sa+  +++++lf  + +   
     pf01112   131 EVSQQRAEEFSEAQDMY-YLETSAKESDNVEKLFLDLAC    168  

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