hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090630/iprscan-20090630-18422136/chunk_1/iprscan-20090630-18422136.nocrc
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Query sequence: pf02026s1
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02985.12.ls HEAT repeat                                    108.3      2e-29  10
PF02985.12.fs HEAT repeat                                     94.9    1.4e-25   8

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02985.12.fs   2/8     172   208 ..     1    36 []    36.5    3e-09
PF02985.12.ls   3/10    172   208 ..     1    36 []    38.5  2.1e-08
PF02985.12.ls   5/10    449   485 ..     1    36 []    13.1     0.96
PF02985.12.ls   9/10   1276  1312 ..     1    36 []    22.2   0.0018
PF02985.12.ls  10/10   1395  1430 ..     1    36 []    23.4  0.00076

Alignments of top-scoring domains:
PF02985.12.fs: domain 2 of 8, from 172 to 208: score 36.5, E = 3e-09
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        +l++++p++++ll+Dp++ VR+aA+++L+++++++   
   pf02026s1   172    TlTLSKIVPHICNLLGDPNSQVRDAAINSLVEIYRHV    208  

PF02985.12.ls: domain 3 of 10, from 172 to 208: score 38.5, E = 2.1e-08
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                        +l++++p++++ll+Dp++ VR+aA+++L+++++++   
   pf02026s1   172    TlTLSKIVPHICNLLGDPNSQVRDAAINSLVEIYRHV    208  

PF02985.12.ls: domain 5 of 10, from 449 to 485: score 13.1, E = 0.96
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       +++++l+p++ + +++++  VR+ ++e L  l++     
   pf02026s1   449    HtHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEW    485  

PF02985.12.ls: domain 9 of 10, from 1276 to 1312: score 22.2, E = 0.0018
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      e++++++l lll+ l+D+d ++R+ A++ L +++++    
   pf02026s1  1276    EeHFKTILLLLLETLGDKDHSIRALALRVLREILRNQ    1312 

PF02985.12.ls: domain 10 of 10, from 1395 to 1430: score 23.4, E = 0.00076
                   *->e.ildellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      + ++ +++p ll++ + ++++VR+a++++L+a+++v+   
   pf02026s1  1395    QlLV-DIIPGLLQGYDNTESSVRKASVFCLVAIYSVI    1430 

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