hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-05231725/chunk_1/iprscan-20080813-05231725.nocrc
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Query sequence: pf02494
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00059                                                 100.1    2.6e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00059    1/1    1819  1865 ..     1    49 []   100.1  2.6e-25

Alignments of top-scoring domains:
SM00059: domain 1 of 1, from 1819 to 1865: score 100.1, E = 2.6e-25
                   *->gnsdGapCvFPFiYrGksYhdCTseGrndgmlWCsTTsnYDrDgkWg
                      ++ dG pCvFPFi++GksY++C+ e r+   lWCsTT++YDrD+ Wg
     pf02494  1819    ETDDGVPCVFPFIFNGKSYEECIIESRAK--LWCSTTADYDRDHEWG 1863 

                   fC<-*
                   fC   
     pf02494  1864 FC    1865 

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