hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-06265367/chunk_1/iprscan-20080813-06265367.nocrc
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Query sequence: pf04987
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00735.9.ls Septin                                         607.2   1.3e-179   1
PF00735.9.fs Septin                                         605.4   4.3e-179   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00735.9.fs   1/1      33   309 ..     1   292 []   605.4 4.3e-179
PF00735.9.ls   1/1      33   309 ..     1   292 []   607.2 1.3e-179

Alignments of top-scoring domains:
PF00735.9.fs: domain 1 of 1, from 33 to 309: score 605.4, E = 4.3e-179
                   *->kGfdFTLMVVGeSGLGKtTlINTLFltdLiranlanDsreipgpsEt
                      +Gf+FTLMVVGeSGLGK+TlIN+LFltdL+         e+pgps  
     pf04987    33    RGFEFTLMVVGESGLGKSTLINSLFLTDLYSP-------EYPGPSH- 71   

                   kikktveIkeatkveiEEdGvkLnLtViDTPGFGDaiDNsncWkPIveYI
                   +ikktv+++  +kv+i+E Gv L Lt++DTPGFGDa+DNsncW+P+++YI
     pf04987    72 RIKKTVQVE-QSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYI 120  

                   deQfdqYLraEsrinRntkivDnRVHcCLYFIsPtGHgLkpLDvefMKkL
                   d++f+ YL aEsr+nR + + DnRV cCLYFI P+GHgLkpLD+efMK+L
     pf04987   121 DSKFEDYLNAESRVNR-RQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRL 169  

                   sekVNlIPVIAKADtLTadElqefKkrIredIeaqkIkIYkFPPdeeede
                   +ekVN+IP IAKADtLT++E q+fKk+I+ +I ++kIkIY   ++e +de
     pf04987   170 HEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYE--FPETDDE 217  

                   DEefketteqLkssiPFAIvGSnteiengdGekVRGRkYPWGvVEVENps
                    Ee  ++ +++k+++P A+vGSnt+ie  +G++VRGR+YPWGv EVEN +
     pf04987   218 -EE-NKLVKKIKDRLPLAVVGSNTIIEV-NGKRVRGRQYPWGVAEVENGE 264  

                   HCDFvkLRnlLirtHLqDLkevThellYEnYRsekLsalgrkadn<-*
                   HCDF +LRn+LirtH+qDLk+vT++++YEnYRs+kL+a + ++ +   
     pf04987   265 HCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGVD    309  

PF00735.9.ls: domain 1 of 1, from 33 to 309: score 607.2, E = 1.3e-179
                   *->kGfdFTLMVVGeSGLGKtTlINTLFltdLiranlanDsreipgpsEt
                      +Gf+FTLMVVGeSGLGK+TlIN+LFltdL+         e+pgps  
     pf04987    33    RGFEFTLMVVGESGLGKSTLINSLFLTDLYSP-------EYPGPSH- 71   

                   kikktveIkeatkveiEEdGvkLnLtViDTPGFGDaiDNsncWkPIveYI
                   +ikktv+++  +kv+i+E Gv L Lt++DTPGFGDa+DNsncW+P+++YI
     pf04987    72 RIKKTVQVE-QSKVLIKEGGVQLLLTIVDTPGFGDAVDNSNCWQPVIDYI 120  

                   deQfdqYLraEsrinRntkivDnRVHcCLYFIsPtGHgLkpLDvefMKkL
                   d++f+ YL aEsr+nR + + DnRV cCLYFI P+GHgLkpLD+efMK+L
     pf04987   121 DSKFEDYLNAESRVNR-RQMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRL 169  

                   sekVNlIPVIAKADtLTadElqefKkrIredIeaqkIkIYkFPPdeeede
                   +ekVN+IP IAKADtLT++E q+fKk+I+ +I ++kIkIY   ++e +de
     pf04987   170 HEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYE--FPETDDE 217  

                   DEefketteqLkssiPFAIvGSnteiengdGekVRGRkYPWGvVEVENps
                    Ee  ++ +++k+++P A+vGSnt+ie  +G++VRGR+YPWGv EVEN +
     pf04987   218 -EE-NKLVKKIKDRLPLAVVGSNTIIEV-NGKRVRGRQYPWGVAEVENGE 264  

                   HCDFvkLRnlLirtHLqDLkevThellYEnYRsekLsalgrkadn<-*
                   HCDF +LRn+LirtH+qDLk+vT++++YEnYRs+kL+a + ++ +   
     pf04987   265 HCDFTILRNMLIRTHMQDLKDVTNNVHYENYRSRKLAAVTYNGVD    309  

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