hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-06531504/chunk_1/iprscan-20080813-06531504.nocrc
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Query sequence: pf06453
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF01562.9.fs    Reprolysin family propeptide            156.4    6.7e-44   1
PF01421.9.fs    Reprolysin (M12B) family zinc metallo   150.9    3.2e-42   1
PF01562.9.ls    Reprolysin family propeptide            145.4    1.4e-40   1
PF01421.9.ls    Reprolysin (M12B) family zinc metallo    -6.1    1.8e-12   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF01562.9.ls      1/1       8   145 ..     1   165 []   145.4  1.4e-40
PF01562.9.fs      1/1      48   145 ..    60   165 .]   156.4  6.7e-44
PF01421.9.ls      1/1     187   279 .]     1   203 []    -6.1  1.8e-12
PF01421.9.fs      1/1     188   279 .]     1    95 [.   150.9  3.2e-42

Alignments of top-scoring domains:
PF01562.9.ls: domain 1 of 1, from 8 to 145: score 145.4, E = 1.4e-40
                   *->lLlllllpglaglg..aalgtpweyssyEvviPekltsegkrrvkqd
                         l++ pg+ ++ ++++ + +  +s ++v+    l++++       
     pf06453     8    NVSLCH-PGWSAVAqsWLTAAS--ASRVQVIL---LPHPPGWL---- 44   

                   ldirlkslkeekyeeelsYvlrieGkpyiLhLeknrgllapdftvttYde
                              +  e+ sY + i+ k y++hL++   +la +f ++ Y++
     pf06453    45 -----------GLQEQISYIIPIDEKLYTVHLKQRY-FLADNFMIYLYNQ 82   

                   dGtlvteepliqdhCyYqGyVeGypnSaVslSTCsGGLRGllqlenvsYg
                    G++ t + +iq+ CyYqG +eGyp+S+V+lSTCs GLRG+lq+envsYg
     pf06453    83 -GSMNTYSSDIQTQCYYQGNIEGYPDSMVTLSTCS-GLRGILQFENVSYG 130  

                   IEPlesssgfeAQrlPHiiY<-*
                   IEPles+ +f+     H++Y   
     pf06453   131 IEPLESAVEFQ-----HVLY    145  

PF01562.9.fs: domain 1 of 1, from 48 to 145: score 156.4, E = 6.7e-44
                   *->eelsYvlrieGkpyiLhLeknrgllapdftvttYdedGtlvteepli
                      e+ sY + i+ k y++hL++   +la +f ++ Y++ G++ t + +i
     pf06453    48    EQISYIIPIDEKLYTVHLKQRY-FLADNFMIYLYNQ-GSMNTYSSDI 92   

                   qdhCyYqGyVeGypnSaVslSTCsGGLRGllqlenvsYgIEPlesssgfe
                   q+ CyYqG +eGyp+S+V+lSTCs GLRG+lq+envsYgIEPles+ +f+
     pf06453    93 QTQCYYQGNIEGYPDSMVTLSTCS-GLRGILQFENVSYGIEPLESAVEFQ 141  

                   AQrlPHiiY<-*
                        H++Y   
     pf06453   142 -----HVLY    145  

PF01421.9.ls: domain 1 of 1, from 187 to 279: score -6.1, E = 1.8e-12
                   *->rYiELvIVvDhgmytkygsdlnkirqrVhqivNlvNeiYrpqLNIrV
                       Y+E++IVvD+ +y+++gsd++ ++++V++iv+l+N+++++ +++++
     pf06453   187    LYLEMHIVVDKTLYDYWGSDSMIVTNKVIEIVGLANSMFTQ-FKVTI 232  

                   vLvgLEIWsdgDkInvqsdandTLhsFgeWRetdLlkrksHDnAqLLtgi
                   vL++LE+Wsd++kI++ + a+++L+ F+eW++++L   ++HD+A+LL   
     pf06453   233 VLSSLELWSDENKISTVGEADELLQKFLEWKQSYLN-LRPHDIAYLL--- 278  

                   dfdgntiGaAyvggmCspkrSvGVvqdhspivllvAvtMAHELGHNLGmt
                                                                     
     pf06453     - -------------------------------------------------- -    

                   HDdkntdgCtCegggsCIMnpvassspskKkFSnCSkddyqkFltkqkpq
                                               +                     
     pf06453   279 ----------------------------M--------------------- 279  

                   CLlNkP<-*
                            
     pf06453     - ------    -    

PF01421.9.fs: domain 1 of 1, from 188 to 279: score 150.9, E = 3.2e-42
                   *->rYiELvIVvDhgmytkygsdlnkirqrVhqivNlvNeiYrpqLNIrV
                       Y+E++IVvD+ +y+++gsd++ ++++V++iv+l+N+++++ +++++
     pf06453   188    -YLEMHIVVDKTLYDYWGSDSMIVTNKVIEIVGLANSMFTQ-FKVTI 232  

                   vLvgLEIWsdgDkInvqsdandTLhsFgeWRetdLlkrksHDnAqLLt<-
                   vL++LE+Wsd++kI++ + a+++L+ F+eW++++L   ++HD+A+LL+  
     pf06453   233 VLSSLELWSDENKISTVGEADELLQKFLEWKQSYLN-LRPHDIAYLLM   279  

                   *
                    
     pf06453     -   -    

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