# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Opf10365.fasta.nr -Q pf10365.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 pf10365, 206 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6815602 sequences Expectation_n fit: rho(ln(x))= 5.4103+/-0.00022; mu= 4.7558+/- 0.012 mean_var=185.8714+/-34.138, 0's: 91 Z-trim: 226 B-trim: 58 in 1/64 Lambda= 0.094074 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088968|dbj|BAD92931.1| splicing factor, argin ( 206) 1338 193.2 2e-47 gi|37537968|sp|Q8WXA9|SFR12_HUMAN Splicing factor, ( 508) 1279 185.9 8e-45 gi|119571714|gb|EAW51329.1| splicing factor, argin ( 624) 1279 186.0 8.9e-45 gi|119571716|gb|EAW51331.1| splicing factor, argin ( 623) 1262 183.7 4.4e-44 gi|114599974|ref|XP_001162337.1| PREDICTED: splici ( 510) 1255 182.6 7.6e-44 gi|67968786|dbj|BAE00750.1| unnamed protein produc ( 510) 1255 182.6 7.6e-44 gi|114599972|ref|XP_517732.2| PREDICTED: hypotheti ( 626) 1255 182.8 8.5e-44 gi|109077422|ref|XP_001087960.1| PREDICTED: simila ( 513) 1229 179.1 8.8e-43 gi|109077420|ref|XP_001087835.1| PREDICTED: simila ( 629) 1229 179.2 9.8e-43 gi|194223833|ref|XP_001492097.2| PREDICTED: splici ( 628) 1212 176.9 4.9e-42 gi|73949642|ref|XP_861191.1| PREDICTED: similar to ( 361) 1200 174.9 1.1e-41 gi|73949640|ref|XP_544361.2| PREDICTED: similar to ( 510) 1200 175.2 1.3e-41 gi|76646241|ref|XP_869692.1| PREDICTED: similar to ( 632) 1201 175.4 1.4e-41 gi|193787205|dbj|BAG52411.1| unnamed protein produ ( 514) 929 138.4 1.6e-30 gi|37537914|sp|Q9JKL7|SFR12_RAT Splicing factor, a ( 494) 886 132.5 8.9e-29 gi|74140797|dbj|BAC29709.2| unnamed protein produc ( 401) 884 132.1 9.7e-29 gi|37537951|sp|Q8BZX4|SFR12_MOUSE Splicing factor, ( 494) 884 132.2 1.1e-28 gi|149059244|gb|EDM10251.1| splicing factor, argin ( 494) 884 132.2 1.1e-28 gi|148686563|gb|EDL18510.1| splicing factor, argin ( 519) 884 132.3 1.1e-28 gi|149059243|gb|EDM10250.1| splicing factor, argin ( 610) 884 132.4 1.2e-28 gi|148686566|gb|EDL18513.1| splicing factor, argin ( 626) 884 132.4 1.2e-28 gi|39645085|gb|AAH63761.1| Sfrs12 protein [Mus mus ( 407) 877 131.2 1.9e-28 gi|74217177|dbj|BAC34905.2| unnamed protein produc ( 513) 865 129.7 6.6e-28 gi|126317239|ref|XP_001381458.1| PREDICTED: simila ( 613) 837 126.0 1e-26 gi|50949479|emb|CAH10414.1| hypothetical protein [ ( 331) 746 113.2 3.8e-23 gi|118103871|ref|XP_424756.2| PREDICTED: hypotheti ( 642) 713 109.2 1.2e-21 gi|148686565|gb|EDL18512.1| splicing factor, argin ( 292) 659 101.3 1.3e-19 gi|26336164|dbj|BAC31767.1| unnamed protein produc ( 317) 629 97.3 2.3e-18 gi|26333193|dbj|BAC30314.1| unnamed protein produc ( 318) 559 87.8 1.6e-15 gi|149634025|ref|XP_001509502.1| PREDICTED: hypoth ( 221) 523 82.7 4e-14 gi|124411374|emb|CAK76577.1| unnamed protein produ ( 430) 523 83.2 5.6e-14 gi|47227297|emb|CAF96846.1| unnamed protein produc (2196) 522 84.2 1.4e-13 gi|124425464|emb|CAK90250.1| unnamed protein produ ( 842) 514 82.4 1.9e-13 gi|124408219|emb|CAK73583.1| unnamed protein produ ( 768) 511 81.9 2.3e-13 gi|124428203|emb|CAK92976.1| unnamed protein produ ( 805) 506 81.3 3.8e-13 gi|124415611|emb|CAK80681.1| unnamed protein produ ( 423) 502 80.3 4e-13 gi|23496658|gb|AAN36214.1|AE014846_13 eukaryotic t (1377) 503 81.3 6.7e-13 gi|148803908|gb|EDL45307.1| Protein kinase domain (1544) 502 81.2 7.8e-13 gi|194040628|ref|XP_001927376.1| PREDICTED: simila (1588) 490 79.6 2.4e-12 gi|60475416|gb|EAL73351.1| initiation factor eIF-4 ( 925) 481 78.0 4.3e-12 gi|156223137|gb|EDO43975.1| predicted protein [Nem ( 686) 479 77.5 4.5e-12 gi|126337731|ref|XP_001370189.1| PREDICTED: simila (1589) 479 78.1 6.9e-12 gi|60471279|gb|EAL69242.1| putative protein serine (1028) 476 77.4 7.3e-12 gi|28829943|gb|AAO52434.1| similar to Arabidopsis (1028) 476 77.4 7.3e-12 gi|157019622|gb|EDO64464.1| AGAP011217-PA [Anophel (1241) 477 77.7 7.3e-12 gi|124394584|emb|CAK60105.1| unnamed protein produ ( 709) 472 76.6 8.8e-12 gi|89299460|gb|EAR97448.1| hypothetical protein TT ( 215) 465 74.8 9.3e-12 gi|54038076|gb|AAH84352.1| LOC495149 protein [Xeno (1029) 468 76.3 1.6e-11 gi|60465378|gb|EAL63467.1| hypothetical protein DD (1447) 467 76.4 2e-11 gi|124401855|emb|CAK67330.1| unnamed protein produ ( 686) 462 75.2 2.2e-11 >>gi|62088968|dbj|BAD92931.1| splicing factor, arginine/ (206 aa) initn: 1338 init1: 1338 opt: 1338 Z-score: 1006.8 bits: 193.2 E(): 2e-47 Smith-Waterman score: 1338; 100.000% identity (100.000% similar) in 206 aa overlap (1-206:1-206) 10 20 30 40 50 60 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIK 10 20 30 40 50 60 70 80 90 100 110 120 pf1036 EKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDR 70 80 90 100 110 120 130 140 150 160 170 180 pf1036 DKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSS 130 140 150 160 170 180 190 200 pf1036 SRSPRTSKTIKRKSSRSPSPRSRNKK :::::::::::::::::::::::::: gi|620 SRSPRTSKTIKRKSSRSPSPRSRNKK 190 200 >>gi|37537968|sp|Q8WXA9|SFR12_HUMAN Splicing factor, arg (508 aa) initn: 1279 init1: 1279 opt: 1279 Z-score: 959.9 bits: 185.9 E(): 8e-45 Smith-Waterman score: 1279; 100.000% identity (100.000% similar) in 198 aa overlap (9-206:218-415) 10 20 30 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE :::::::::::::::::::::::::::::: gi|375 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 190 200 210 220 230 240 40 50 60 70 80 90 pf1036 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREK 250 260 270 280 290 300 100 110 120 130 140 150 pf1036 DREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 DREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRS 310 320 330 340 350 360 160 170 180 190 200 pf1036 YNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKK :::::::::::::::::::::::::::::::::::::::::::::::: gi|375 YNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHIS 370 380 390 400 410 420 gi|375 ERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENK 430 440 450 460 470 480 >>gi|119571714|gb|EAW51329.1| splicing factor, arginine/ (624 aa) initn: 1279 init1: 1279 opt: 1279 Z-score: 959.1 bits: 186.0 E(): 8.9e-45 Smith-Waterman score: 1279; 100.000% identity (100.000% similar) in 198 aa overlap (9-206:334-531) 10 20 30 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE :::::::::::::::::::::::::::::: gi|119 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 310 320 330 340 350 360 40 50 60 70 80 90 pf1036 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREK 370 380 390 400 410 420 100 110 120 130 140 150 pf1036 DREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRS 430 440 450 460 470 480 160 170 180 190 200 pf1036 YNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKK :::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHIS 490 500 510 520 530 540 gi|119 ERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENK 550 560 570 580 590 600 >>gi|119571716|gb|EAW51331.1| splicing factor, arginine/ (623 aa) initn: 4097 init1: 1252 opt: 1262 Z-score: 946.6 bits: 183.7 E(): 4.4e-44 Smith-Waterman score: 1262; 99.495% identity (99.495% similar) in 198 aa overlap (9-206:334-530) 10 20 30 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE :::::::::::::::::::::::::::::: gi|119 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 310 320 330 340 350 360 40 50 60 70 80 90 pf1036 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREK 370 380 390 400 410 420 100 110 120 130 140 150 pf1036 DREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRS 430 440 450 460 470 480 160 170 180 190 200 pf1036 YNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKK ::::::::::::::::::::::::::::::::::::::::::: :::: gi|119 YNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPR-RNKKDKKREKERDHIS 490 500 510 520 530 540 gi|119 ERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEENK 550 560 570 580 590 600 >>gi|114599974|ref|XP_001162337.1| PREDICTED: splicing f (510 aa) initn: 966 init1: 966 opt: 1255 Z-score: 942.3 bits: 182.6 E(): 7.6e-44 Smith-Waterman score: 1255; 98.500% identity (99.000% similar) in 200 aa overlap (9-206:218-417) 10 20 30 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE :::::::::::::::::::::::::::::: gi|114 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 190 200 210 220 230 240 40 50 60 70 80 90 pf1036 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKD--RDKER ::::::::.:::::::::::::::::::::::::::::::::::::::::::: ::::: gi|114 RRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDKDRDKER 250 260 270 280 290 300 100 110 120 130 140 150 pf1036 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 310 320 330 340 350 360 160 170 180 190 200 pf1036 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDH 370 380 390 400 410 420 gi|114 ISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNREPDSSVSKEVDDKDAPRTEE 430 440 450 460 470 480 >>gi|67968786|dbj|BAE00750.1| unnamed protein product [M (510 aa) initn: 966 init1: 966 opt: 1255 Z-score: 942.3 bits: 182.6 E(): 7.6e-44 Smith-Waterman score: 1255; 98.500% identity (99.000% similar) in 200 aa overlap (9-206:218-417) 10 20 30 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE :::::::::::::::::::::::::::::: gi|679 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 190 200 210 220 230 240 40 50 60 70 80 90 pf1036 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKD--RDKER ::::::::.:::::::::::::::::::::::::::::::::::::::::::: ::::: gi|679 RRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDKDRDKER 250 260 270 280 290 300 100 110 120 130 140 150 pf1036 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 310 320 330 340 350 360 160 170 180 190 200 pf1036 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDH 370 380 390 400 410 420 gi|679 ISERRERERSTSMRKSSDDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPRTEE 430 440 450 460 470 480 >>gi|114599972|ref|XP_517732.2| PREDICTED: hypothetical (626 aa) initn: 966 init1: 966 opt: 1255 Z-score: 941.5 bits: 182.8 E(): 8.5e-44 Smith-Waterman score: 1255; 98.500% identity (99.000% similar) in 200 aa overlap (9-206:334-533) 10 20 30 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE :::::::::::::::::::::::::::::: gi|114 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 310 320 330 340 350 360 40 50 60 70 80 90 pf1036 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKD--RDKER ::::::::.:::::::::::::::::::::::::::::::::::::::::::: ::::: gi|114 RRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDKDRDKER 370 380 390 400 410 420 100 110 120 130 140 150 pf1036 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 430 440 450 460 470 480 160 170 180 190 200 pf1036 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKK :::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDH 490 500 510 520 530 540 gi|114 ISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNREPDSSVSKEVDDKDAPRTEE 550 560 570 580 590 600 >>gi|109077422|ref|XP_001087960.1| PREDICTED: similar to (513 aa) initn: 940 init1: 940 opt: 1229 Z-score: 923.2 bits: 179.1 E(): 8.8e-43 Smith-Waterman score: 1229; 98.469% identity (98.980% similar) in 196 aa overlap (9-202:218-413) 10 20 30 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE :::::::::::::::::::::::::::::: gi|109 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 190 200 210 220 230 240 40 50 60 70 80 90 pf1036 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKD--RDKER ::::::::.:::::::::::::::::::::::::::::::::::::::::::: ::::: gi|109 RRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDKDRDKER 250 260 270 280 290 300 100 110 120 130 140 150 pf1036 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 310 320 330 340 350 360 160 170 180 190 200 pf1036 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKK :::::::::::::::::::::::::::::::::::::::::::::: gi|109 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSVHVCRKNLKKEKEK 370 380 390 400 410 420 gi|109 GPTSVKKERENVSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPR 430 440 450 460 470 480 >>gi|109077420|ref|XP_001087835.1| PREDICTED: similar to (629 aa) initn: 940 init1: 940 opt: 1229 Z-score: 922.4 bits: 179.2 E(): 9.8e-43 Smith-Waterman score: 1229; 98.469% identity (98.980% similar) in 196 aa overlap (9-202:334-529) 10 20 30 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE :::::::::::::::::::::::::::::: gi|109 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE 310 320 330 340 350 360 40 50 60 70 80 90 pf1036 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKD--RDKER ::::::::.:::::::::::::::::::::::::::::::::::::::::::: ::::: gi|109 RRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDKDRDKER 370 380 390 400 410 420 100 110 120 130 140 150 pf1036 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPP 430 440 450 460 470 480 160 170 180 190 200 pf1036 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKK :::::::::::::::::::::::::::::::::::::::::::::: gi|109 RSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSVHVCRKNLKKEKEK 490 500 510 520 530 540 gi|109 GPTSVKKERENVSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPR 550 560 570 580 590 600 >>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing f (628 aa) initn: 947 init1: 947 opt: 1212 Z-score: 909.9 bits: 176.9 E(): 4.9e-42 Smith-Waterman score: 1212; 92.574% identity (98.020% similar) in 202 aa overlap (9-206:334-535) 10 20 30 pf1036 YSNNFFFFRSRSHNRSRSRQKDRRRSKSPHKKRSKSRE ::::::::::::::::::::::.::::::: gi|194 KGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHRKRSKSRE 310 320 330 340 350 360 40 50 60 70 80 90 pf1036 RRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKERE----REKEREKEKERGKNKDRDK ::::::::.:::::::::::::::::::::::::::. ::::::::::::::::.:. gi|194 RRKSRSRSRSRDKRKDTREKIKEKERVKEKDREKERDKERDREKEREKEKERGKNKDKDR 370 380 390 400 410 420 100 110 120 130 140 150 pf1036 EREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRT :..:::.:::::::::::::::::.:::::::::::::.::::::::::::::::::::: gi|194 EKDKDRDKDKEKDREREREKEHEKERDKEKEKEQDKEKDREKDRSKEIDEKRKKDKKSRT 430 440 450 460 470 480 160 170 180 190 200 pf1036 PPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKK :::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|194 PPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTMKRKSSRSPSPRSRNKKDKKREKER 490 500 510 520 530 540 gi|194 DHISERRERERSTSTRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVGKEVDDKDAPRT 550 560 570 580 590 600 206 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 13 08:13:29 2008 done: Wed Aug 13 08:16:18 2008 Total Scan time: 601.970 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]