hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-09574662/chunk_1/iprscan-20080813-09574662.nocrc
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Query sequence: pg00883
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00175                                                 -67.1      0.002   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00175     1/1     145   279 ..     1   172 []   -67.1    0.002

Alignments of top-scoring domains:
SM00175: domain 1 of 1, from 145 to 279: score -67.1, E = 0.002
                   *->FKiilIGDSGVGKSsLLsRFtdd..kFsedsksTIGVDFktktiev.
                       K il GD +VGK+ L + F +d+  F+ ++  T G+D  +kt+ v+
     pg00883   145    AKCILAGDPAVGKTALAQIFRSDgaHFQKSYTLTTGMDLVVKTVPVp 191  

                   .dGkrvKLQIWDTAGQERFRSiTssYYRGAvGalLVYDiTnreSFenlkn
                   + G  v L I D AG E F  +      + +   LVYD+Tn+eSF+n+++
     pg00883   192 dTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNCSK 241  

                   WlkelreyadpppenvvimLVGNKsDLeeqRqVstEeaekficDcAeehg
                   Wl+ +r++a+              + L          +++          
     pg00883   242 WLEKARSQAPG-------------ISLPG-------TGCRH--------- 262  

                   llFifETSAKtntNVeeAFeelakkIlkr<-*
                    +++             A +    +       
     pg00883   263 -PCF-----------PAASLSFGSRAQGH    279  

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