hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-11062122/chunk_1/iprscan-20080813-11062122.nocrc
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Query sequence: ph00327
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00307                                                 434.3   6.3e-126   1
SM00273                                                 156.9    2.1e-42   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00273    1/1      61   183 ..     1   137 []   156.9  2.1e-42
SM00307    1/1     837  1035 ..     1   207 []   434.3 6.3e-126

Alignments of top-scoring domains:
SM00273: domain 1 of 1, from 61 to 183: score 156.9, E = 2.1e-42
                   *->sdlevkVrkATnndewgpkgkhlreIlqgTsneklrssfaeimavlw
                      +++ v++ kA+n++e+++k+kh+r++++gT++ek  ++ ++++ v +
     ph00327    61    RTQTVSINKAINTQEVAVKEKHARTCILGTHHEK--GAQTFWSVVNR 105  

                   rRLndkgknWrvvyKaLillhyLlrnGspfervvlealrnrnrIltLsdf
                    +L+++    ++++K+++++h+Llr+G+  ++v+++ lr+rn+++++s++
     ph00327   106 LPLSSN---AVLCWKFCHVFHKLLRDGH--PNVLKDSLRYRNELSDMSRM 150  

                   qdkvfndidsrgkDqGaniRtyakyLlelledderlkeer<-*
                   +++        ++++G+++  y k+L +++e++ ++++++   
     ph00327   151 WGH-------LSEGYGQLCSIYLKLLRTKMEYHTKNPRFP    183  

SM00307: domain 1 of 1, from 837 to 1035: score 434.3, E = 6.3e-126
                   *->gveleVdEsILeaAkaItkAiaaLVkAAtnaQrEIVaqGrggaspae
                      gv+leV+E+IL +++++++Ai++L+ A++++QrEIV++Grg+asp+e
     ph00327   837    GVKLEVNERILGCCTSLMQAIQVLIVASKDLQREIVESGRGTASPKE 883  

                   fYkKnsrWTEGLISAAKAVAaAtnvLveaAdgvvqGkgseEeLIVAakeV
                   fY+KnsrWTEGLISA+KAV+++++v+v+aAd vvqG+g++EeL+V+++e+
     ph00327   884 FYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGRGKFEELMVCSHEI 933  

                   AASTAQLVaASRVKAdkdSqSqAaqdrLeaAskaVtnAtanLVaavksva
                   AASTAQLVaAS+VKAdkdS+   ++++L++As+ V++Ata +Va++ s++
     ph00327   934 AASTAQLVAASKVKADKDSP---NLAQLQQASRGVNQATAGVVASTISGK 980  

                   ieddeetieqeqelDfskLslhegKtqEMEqQVeILKLEkeLeaARkkLa
                   ++     ie+++++Dfs+++l+++K+qEM++QV++L+LE+eL+++R+kL+
     ph00327   981 SQ-----IEETDNMDFSSMTLTQIKRQEMDSQVRVLELENELQKERQKLG 1025 

                   eiRKqeYkla<-*
                   e+RK++Y+la   
     ph00327  1026 ELRKKHYELA    1035 

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