hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-13514033/chunk_1/iprscan-20080813-13514033.nocrc
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Query sequence: pj01570
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.fs Protein kinase domain                       253.6    3.7e-73   1
PF00069.15.ls Protein kinase domain                       252.9    6.2e-73   1
PF07714.7.fs Protein tyrosine kinase                      92.4    9.9e-27   1
PF07714.7.ls Protein tyrosine kinase                      85.4    1.6e-22   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF07714.7.ls   1/1     550   810 ..     1   272 []    85.4  1.6e-22
PF00069.15.ls   1/1     553   810 ..     1   287 []   252.9  6.2e-73
PF00069.15.fs   1/1     557   810 ..     6   287 .]   253.6  3.7e-73
PF07714.7.fs   1/1     557   753 ..     6   218 ..    92.4  9.9e-27

Alignments of top-scoring domains:
PF07714.7.ls: domain 1 of 1, from 550 to 810: score 85.4, E = 1.6e-22
                   *->lklgkk..LGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseee
                       + g+   LG+G +G+Vy G+ +    +t++  A+K ++e   +++ 
     pj01570   550    TETGERlvLGKGTYGVVYAGRDR----HTRVRIAIKEIPE--RDSRF 590  

                   ieredFlrEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegG
                      + + +E+++ ++l +H+NiVr+lG  ++ g+     l i +E ++gG
     pj01570   591 --SQPLHEEIALHRRL-RHKNIVRYLGSASQ-GGY----LKIFMEEVPGG 632  

                   dLldfLrkhregrpLtlkd.Llsf.alQiAkGMeYLesknfvHRDLAARN
                   +L + Lr+    +pL+  ++ +sf  +Qi +G+ YL+++++vHRD+   N
     pj01570   633 SLSSLLRSV--WGPLKDNEsTISFyTRQILQGLGYLHDNHIVHRDIKGDN 680  

                   cLVse.nlvVKIsDFGLaRdiynddyY.vrkkgggk.lPvkWmAPEslky
                   +L++  ++  KIsDFG ++ +      +++  +++ +     mAPE +  
     pj01570   681 VLINTfSGLLKISDFGTSKRL-----AgITPCTETFtGTLQYMAPEIIDQ 725  

                   gk..FtskSDVWSFGVlLWEiftlGeqPFYpgm.sneevlellyedGyRL
                   g +++  + D+WS G++  E+ t G++P + +++s++  + ++++     
     pj01570   726 GPrgYGKAADIWSLGCTVIEMAT-GRPP-FHELgSPQAAMFQVGMYKVHP 773  

                   prPenCPdelYdlMlqCWaedPedRPtFsel..veeL<-*
                   p+P   ++e    +l+  ++dP  R + ++l +  +L   
     pj01570   774 PMPSSLSAEAQAFLLRTFEPDPRLRASAQTLlgDPFL    810  

PF00069.15.ls: domain 1 of 1, from 553 to 810: score 252.9, E = 6.2e-73
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                       e+l +lG+G++G+Vy ++++ t+ + A+K+i+ r+ + +++ +   
     pj01570   553    GERL-VLGKGTYGVVYAGRDRHTRVRIAIKEIPERDSRFSQPLHE-- 596  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                     Ei++++rL+H+NIvr++++   +++l + +E ++gG    +L+++l+ 
     pj01570   597 --EIALHRRLRHKNIVRYLGSASQGGYLKIFMEEVPGG----SLSSLLR- 639  

                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                    +  gpl   e ++ ++ +Qil+gl YLH+n i+HRD+K +N+L++    
     pj01570   640 -SVWGPLKDNESTISFYTRQILQGLGYLHDNHIVHRDIKGDNVLINTFSG 688  

                   vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvll.ggngygtkv
                   +   lKi+DFG +k l  +  + + tf+GT+ YmAPE++ +g +gyg+++
     pj01570   689 L---LKISDFGTSKRL-AgITPcTETFTGTLQYMAPEIIDqGPRGYGKAA 734  

                   DvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewds
                   D+WSlG++++e++tG+pPF +      ++++ ++++++ +++ + p + s
     pj01570   735 DIWSLGCTVIEMATGRPPFHEL----GSPQAAMFQVGMYKVHPPMPSSLS 780  

                   isrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
                                 ea+ ++ + +++DP  R +a+ +l +P++   
     pj01570   781 -------------AEAQAFLLRTFEPDPRLRASAQTLLGDPFL    810  

PF00069.15.fs: domain 1 of 1, from 557 to 810: score 253.6, E = 3.7e-73
                   *->klGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarrlsEiq
                      +lG+G++G+Vy ++++ t+ + A+K+i+ r+ + +++ +     Ei+
     pj01570   557    VLGKGTYGVVYAGRDRHTRVRIAIKEIPERDSRFSQPLHE----EIA 599  

                   ilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylsetrrkg
                   +++rL+H+NIvr++++   +++l + +E ++gG    +L+++l+  +  g
     pj01570   600 LHRRLRHKNIVRYLGSASQGGYLKIFMEEVPGG----SLSSLLR--SVWG 643  

                   pllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngvvdafl
                   pl   e ++ ++ +Qil+gl YLH+n i+HRD+K +N+L++    +   l
     pj01570   644 PLKDNESTISFYTRQILQGLGYLHDNHIVHRDIKGDNVLINTFSGL---L 690  

                   KiaDFGlAkklst.sss.lttfvGTpwYmAPEvll.ggngygtkvDvWSl
                   Ki+DFG +k l  +  + + tf+GT+ YmAPE++ +g +gyg+++D+WSl
     pj01570   691 KISDFGTSKRL-AgITPcTETFTGTLQYMAPEIIDqGPRGYGKAADIWSL 739  

                   GvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsisrse
                   G++++e++tG+pPF +      ++++ ++++++ +++ + p + s     
     pj01570   740 GCTVIEMATGRPPFHEL----GSPQAAMFQVGMYKVHPPMPSSLS----- 780  

                   frrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
                            ea+ ++ + +++DP  R +a+ +l +P++   
     pj01570   781 --------AEAQAFLLRTFEPDPRLRASAQTLLGDPFL    810  

PF07714.7.fs: domain 1 of 1, from 557 to 753: score 92.4, E = 9.9e-27
                   *->kLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeieredFl
                      +LG+G +G+Vy G+ +    +t++  A+K ++e   +++    + + 
     pj01570   557    VLGKGTYGVVYAGRDR----HTRVRIAIKEIPE--RDSRF--SQPLH 595  

                   rEAsiMkklGdHpNiVrLlGvctkegePggpglyiVtEymegGdLldfLr
                   +E+++ ++l +H+NiVr+lG  ++ g+     l i +E ++gG+L + Lr
     pj01570   596 EEIALHRRL-RHKNIVRYLGSASQ-GGY----LKIFMEEVPGGSLSSLLR 639  

                   khregrpLtlkd.Llsf.alQiAkGMeYLesknfvHRDLAARNcLVse.n
                   +    +pL+  ++ +sf  +Qi +G+ YL+++++vHRD+   N+L++  +
     pj01570   640 SV--WGPLKDNEsTISFyTRQILQGLGYLHDNHIVHRDIKGDNVLINTfS 687  

                   lvVKIsDFGLaRdiynddyY.vrkkgggk.lPvkWmAPEslkygk..Fts
                   +  KIsDFG ++ +      +++  +++ +     mAPE +  g +++  
     pj01570   688 GLLKISDFGTSKRL-----AgITPCTETFtGTLQYMAPEIIDQGPrgYGK 732  

                   kSDVWSFGVlLWEiftlGeqPFY<-*
                   + D+WS G++  E+ t G++P +   
     pj01570   733 AADIWSLGCTVIEMAT-GRPP-F    753  

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