hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-13580028/chunk_1/iprscan-20080813-13580028.nocrc
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Query sequence: pj01608
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00787.14.fs PX domain                                       86.4    7.5e-26   1
PF00787.14.ls PX domain                                       88.2    2.4e-23   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00787.14.fs   1/1       7   125 ..     1   131 []    86.4  7.5e-26
PF00787.14.ls   1/1       7   125 ..     1   131 []    88.2  2.4e-23

Alignments of top-scoring domains:
PF00787.14.fs: domain 1 of 1, from 7 to 125: score 86.4, E = 7.5e-26
                   *->dpilivvvvdpetsrkkegdkkhtyyvyevttktn......kewsVk
                      d++ + +v+dp+t+     +k++t+y+++ +  + +++++ ke +V+
     pj01608     7    DFLRHYTVSDPRTH-----PKGYTEYKVTAQFISKkdpedvKEVVVW 48   

                   RRYsdFeeLhekLlrkfp.....grilPplPpKklfgryrkeslpmtsvw
                   +RYsdF++Lh +L  ++ +  +++  +P +P+ ++fgr            
     pj01608    49 KRYSDFRKLHGDLAYTHRnlfrrLEEFPAFPRAQVFGR------------ 86   

                   hssnnfdeefiekRrkgLeeyLqrllqhPelsnesevvleFLesd<-*
                        f+ ++ie+Rrkg e+ L+  +++P l n s+ ++eF+      
     pj01608    87 -----FEASVIEERRKGAEDLLRFTVHIPALNN-SPQLKEFFRGG    125  

PF00787.14.ls: domain 1 of 1, from 7 to 125: score 88.2, E = 2.4e-23
                   *->dpilivvvvdpetsrkkegdkkhtyyvyevttktn......kewsVk
                      d++ + +v+dp+t+     +k++t+y+++ +  + +++++ ke +V+
     pj01608     7    DFLRHYTVSDPRTH-----PKGYTEYKVTAQFISKkdpedvKEVVVW 48   

                   RRYsdFeeLhekLlrkfp.....grilPplPpKklfgryrkeslpmtsvw
                   +RYsdF++Lh +L  ++ +  +++  +P +P+ ++fgr            
     pj01608    49 KRYSDFRKLHGDLAYTHRnlfrrLEEFPAFPRAQVFGR------------ 86   

                   hssnnfdeefiekRrkgLeeyLqrllqhPelsnesevvleFLesd<-*
                        f+ ++ie+Rrkg e+ L+  +++P l n s+ ++eF+      
     pj01608    87 -----FEASVIEERRKGAEDLLRFTVHIPALNN-SPQLKEFFRGG    125  

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