# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Opj01663.fasta.nr -Q pj01663.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 pj01663, 241 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6842222 sequences Expectation_n fit: rho(ln(x))= 4.7369+/-0.000184; mu= 10.7555+/- 0.010 mean_var=63.5417+/-12.784, 0's: 36 Z-trim: 37 B-trim: 3518 in 2/66 Lambda= 0.160896 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088460|dbj|BAD92677.1| NADH dehydrogenase (ub ( 241) 1604 380.5 1.2e-103 gi|62822188|gb|AAY14737.1| unknown [Homo sapiens] ( 333) 1496 355.5 5.3e-96 gi|6093592|sp|O95299|NDUAA_HUMAN NADH dehydrogenas ( 355) 1496 355.5 5.6e-96 gi|33303941|gb|AAQ02478.1| NADH dehydrogenase ubiq ( 356) 1496 355.5 5.6e-96 gi|115502296|sp|Q0MQB7|NDUAA_PANTR NADH dehydrogen ( 355) 1490 354.1 1.5e-95 gi|158254992|dbj|BAF83467.1| unnamed protein produ ( 355) 1490 354.1 1.5e-95 gi|115502295|sp|Q0MQB6|NDUAA_GORGO NADH dehydrogen ( 355) 1463 347.9 1.1e-93 gi|55729768|emb|CAH91612.1| hypothetical protein [ ( 355) 1457 346.5 3e-93 gi|115502423|sp|Q5R9E8.2|NDUAA_PONAB NADH dehydrog ( 355) 1456 346.2 3.5e-93 gi|33150572|gb|AAP97164.1|AF087854_1 NADH dehydrog ( 354) 1448 344.4 1.3e-92 gi|55731865|emb|CAH92642.1| hypothetical protein [ ( 390) 1445 343.7 2.2e-92 gi|111662247|gb|ABH12228.1| mitochondrial complex ( 355) 1443 343.2 2.8e-92 gi|109101668|ref|XP_001088031.1| PREDICTED: simila ( 238) 1417 337.0 1.4e-90 gi|109101666|ref|XP_001087784.1| PREDICTED: simila ( 355) 1360 324.0 1.8e-86 gi|149711435|ref|XP_001500629.1| PREDICTED: simila ( 355) 1251 298.7 7.3e-79 gi|21411521|gb|AAH31332.1| NDUFA10 protein [Homo s ( 201) 1216 290.3 1.3e-76 gi|17981384|gb|AAL50984.1|AF453834_1 NADH dehydrog ( 429) 1216 290.6 2.4e-76 gi|119591578|gb|EAW71172.1| NADH dehydrogenase (ub ( 429) 1216 290.6 2.4e-76 gi|26342525|dbj|BAB23961.2| unnamed protein produc ( 332) 1179 281.9 7.5e-74 gi|32363386|sp|Q99LC3|NDUAA_MOUSE NADH dehydrogena ( 355) 1178 281.7 9.2e-74 gi|148708065|gb|EDL40012.1| NADH dehydrogenase (ub ( 367) 1178 281.7 9.5e-74 gi|149037563|gb|EDL91994.1| rCG55630, isoform CRA_ ( 335) 1174 280.8 1.7e-73 gi|81882328|sp|Q561S0|NDUAA_RAT NADH dehydrogenase ( 355) 1174 280.8 1.8e-73 gi|30171809|gb|AAP20092.1| NADH dehydrogenase 1 al ( 355) 1163 278.2 1e-72 gi|73994237|ref|XP_850303.1| PREDICTED: similar to ( 355) 1158 277.1 2.3e-72 gi|464254|sp|P34942|NDUAA_BOVIN NADH dehydrogenase ( 343) 1136 271.9 7.7e-71 gi|74267974|gb|AAI02914.1| NDUFA10 protein [Bos ta ( 329) 1120 268.2 9.8e-70 gi|26337977|dbj|BAC32674.1| unnamed protein produc ( 330) 1083 259.6 3.8e-67 gi|148708069|gb|EDL40016.1| NADH dehydrogenase (ub ( 345) 1083 259.6 3.9e-67 gi|149641865|ref|XP_001511374.1| PREDICTED: simila ( 365) 1004 241.3 1.4e-61 gi|126314359|ref|XP_001376325.1| PREDICTED: simila (1612) 996 240.0 1.5e-60 gi|53135033|emb|CAG32388.1| hypothetical protein [ ( 361) 921 222.1 8.5e-56 gi|54038695|gb|AAH84366.1| LOC495159 protein [Xeno ( 351) 900 217.2 2.4e-54 gi|46249638|gb|AAH68897.1| MGC83091 protein [Xenop ( 351) 900 217.2 2.4e-54 gi|56789248|gb|AAH87982.1| LOC496724 protein [Xeno ( 351) 890 214.9 1.2e-53 gi|169158656|emb|CAQ14201.1| NADH dehydrogenase (u ( 340) 883 213.2 3.7e-53 gi|37589758|gb|AAH59660.1| NADH dehydrogenase (ubi ( 355) 882 213.0 4.5e-53 gi|48734808|gb|AAH71334.1| NADH dehydrogenase (ubi ( 355) 881 212.8 5.2e-53 gi|148708064|gb|EDL40011.1| NADH dehydrogenase (ub ( 273) 820 198.5 7.8e-49 gi|149037566|gb|EDL91997.1| rCG55630, isoform CRA_ ( 253) 813 196.9 2.3e-48 gi|38304046|gb|AAH61985.1| NADH dehydrogenase (ubi ( 273) 813 196.9 2.4e-48 gi|33391177|gb|AAQ17206.1| NADH-ubiquinone oxidore ( 368) 681 166.4 5.1e-39 gi|115653220|ref|XP_792429.2| PREDICTED: similar t ( 325) 620 152.2 8.5e-35 gi|194102161|gb|EDW24204.1| GL24009 [Drosophila pe ( 408) 468 116.9 4.2e-24 gi|54638716|gb|EAL28118.1| GA19526-PA [Drosophila ( 408) 468 116.9 4.2e-24 gi|194121086|gb|EDW43129.1| GM26394 [Drosophila se ( 407) 465 116.2 6.8e-24 gi|194200291|gb|EDX13867.1| GD20916 [Drosophila si ( 407) 465 116.2 6.8e-24 gi|12644364|sp|P91929|NDUAA_DROME NADH dehydrogena ( 407) 464 116.0 8e-24 gi|190656970|gb|EDV54202.1| GG11101 [Drosophila er ( 407) 464 116.0 8e-24 gi|194184334|gb|EDW97945.1| GE10263 [Drosophila ya ( 407) 460 115.1 1.5e-23 >>gi|62088460|dbj|BAD92677.1| NADH dehydrogenase (ubiqui (241 aa) initn: 1604 init1: 1604 opt: 1604 Z-score: 2016.1 bits: 380.5 E(): 1.2e-103 Smith-Waterman score: 1604; 100.000% identity (100.000% similar) in 241 aa overlap (1-241:1-241) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE 10 20 30 40 50 60 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE 70 80 90 100 110 120 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN 130 140 150 160 170 180 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL 190 200 210 220 230 240 pj0166 F : gi|620 F >>gi|62822188|gb|AAY14737.1| unknown [Homo sapiens] (333 aa) initn: 1496 init1: 1496 opt: 1496 Z-score: 1878.7 bits: 355.5 E(): 5.3e-96 Smith-Waterman score: 1496; 97.817% identity (99.127% similar) in 229 aa overlap (6-234:1-229) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 MALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE 10 20 30 40 50 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE 60 70 80 90 100 110 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN 120 130 140 150 160 170 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::: ...: gi|628 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQ 180 190 200 210 220 230 pj0166 F gi|628 DIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNRTLYHLR 240 250 260 270 280 290 >>gi|6093592|sp|O95299|NDUAA_HUMAN NADH dehydrogenase [u (355 aa) initn: 1496 init1: 1496 opt: 1496 Z-score: 1878.3 bits: 355.5 E(): 5.6e-96 Smith-Waterman score: 1496; 97.817% identity (99.127% similar) in 229 aa overlap (6-234:1-229) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 MALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE 10 20 30 40 50 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE 60 70 80 90 100 110 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN 120 130 140 150 160 170 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::: ...: gi|609 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQ 180 190 200 210 220 230 pj0166 F gi|609 DIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNRTLYHLR 240 250 260 270 280 290 >>gi|33303941|gb|AAQ02478.1| NADH dehydrogenase ubiquino (356 aa) initn: 1496 init1: 1496 opt: 1496 Z-score: 1878.3 bits: 355.5 E(): 5.6e-96 Smith-Waterman score: 1496; 97.817% identity (99.127% similar) in 229 aa overlap (6-234:1-229) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 MALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE 10 20 30 40 50 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE 60 70 80 90 100 110 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN 120 130 140 150 160 170 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::: ...: gi|333 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQ 180 190 200 210 220 230 pj0166 F gi|333 DIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNRTLYHLR 240 250 260 270 280 290 >>gi|115502296|sp|Q0MQB7|NDUAA_PANTR NADH dehydrogenase (355 aa) initn: 1490 init1: 1490 opt: 1490 Z-score: 1870.8 bits: 354.1 E(): 1.5e-95 Smith-Waterman score: 1490; 96.943% identity (99.127% similar) in 229 aa overlap (6-234:1-229) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE :::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|115 MALRLLKLAATSASARVVAAGAQRVRGVHSSVQCKLRYGMWHFLLGDKASKRLTE 10 20 30 40 50 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|115 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLAADYNGNCSLE 60 70 80 90 100 110 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN 120 130 140 150 160 170 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::: ...: gi|115 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQ 180 190 200 210 220 230 pj0166 F gi|115 DIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKAVEDIEYLKFDKGPWLKQDNRTLYHLR 240 250 260 270 280 290 >>gi|158254992|dbj|BAF83467.1| unnamed protein product [ (355 aa) initn: 1490 init1: 1490 opt: 1490 Z-score: 1870.8 bits: 354.1 E(): 1.5e-95 Smith-Waterman score: 1490; 97.380% identity (99.127% similar) in 229 aa overlap (6-234:1-229) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE ::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|158 MALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGNKASKRLTE 10 20 30 40 50 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE 60 70 80 90 100 110 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN 120 130 140 150 160 170 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::: ...: gi|158 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQ 180 190 200 210 220 230 pj0166 F gi|158 DIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNRTLYHLR 240 250 260 270 280 290 >>gi|115502295|sp|Q0MQB6|NDUAA_GORGO NADH dehydrogenase (355 aa) initn: 1463 init1: 1463 opt: 1463 Z-score: 1836.9 bits: 347.9 E(): 1.1e-93 Smith-Waterman score: 1463; 95.633% identity (98.253% similar) in 229 aa overlap (6-234:1-229) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE ::::::::.:::::::::::::::::::::: :::: :::::::::::::::::: gi|115 MALRLLKLGATSASARVVAAGAQRVRGIHSSGQCKLPYGMWHFLLGDKASKRLTE 10 20 30 40 50 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|115 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLAADYNGNCSLE 60 70 80 90 100 110 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|115 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYN 120 130 140 150 160 170 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::: ...: gi|115 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQ 180 190 200 210 220 230 pj0166 F gi|115 DIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNRTLYHLR 240 250 260 270 280 290 >>gi|55729768|emb|CAH91612.1| hypothetical protein [Pong (355 aa) initn: 1457 init1: 1457 opt: 1457 Z-score: 1829.4 bits: 346.5 E(): 3e-93 Smith-Waterman score: 1457; 94.760% identity (98.253% similar) in 229 aa overlap (6-234:1-229) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE ::::::::: .::::::::::::::::::::::::::::::.::::::::::::: gi|557 MALRLLKLAPASASARVVAAGAQRVRGIHSSVQCKLRYGMWRFLLGDKASKRLTE 10 20 30 40 50 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE ::::::::::::::::::::::::::::::::::::::::: ::::::::.::::::::: gi|557 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSITGDGKPLAADYNGNCSLE 60 70 80 90 100 110 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN ::::::::::::.::::::::::::::::::::::::::::::::::::::::::.:::: gi|557 KFYDDPRSNDGNTYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYN 120 130 140 150 160 170 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::: ...: gi|557 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQ 180 190 200 210 220 230 pj0166 F gi|557 DIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNHTLYHLR 240 250 260 270 280 290 >>gi|115502423|sp|Q5R9E8.2|NDUAA_PONAB NADH dehydrogenas (355 aa) initn: 1456 init1: 1456 opt: 1456 Z-score: 1828.2 bits: 346.2 E(): 3.5e-93 Smith-Waterman score: 1456; 94.760% identity (98.690% similar) in 229 aa overlap (6-234:1-229) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE ::::::::.::::::::::::::::::::::::::::::::.::::::::::::: gi|115 MALRLLKLGATSASARVVAAGAQRVRGIHSSVQCKLRYGMWRFLLGDKASKRLTE 10 20 30 40 50 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE .:::::::::::::::::::::::::::::::::::::::: ::::::::.::::::::: gi|115 HSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSITGDGKPLAADYNGNCSLE 60 70 80 90 100 110 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN ::::::::::::.::::::::::::::::::::::::::::::::::::::::::.:::: gi|115 KFYDDPRSNDGNTYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYN 120 130 140 150 160 170 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::: ...: gi|115 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQ 180 190 200 210 220 230 pj0166 F gi|115 DIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNRTLYHLR 240 250 260 270 280 290 >>gi|33150572|gb|AAP97164.1|AF087854_1 NADH dehydrogenas (354 aa) initn: 1445 init1: 1357 opt: 1448 Z-score: 1818.1 bits: 344.4 E(): 1.3e-92 Smith-Waterman score: 1448; 95.633% identity (97.380% similar) in 229 aa overlap (6-234:1-228) 10 20 30 40 50 60 pj0166 ADRVAMALRLLKLAATSASARVVAAGAQRVRGIHSSVQCKLRYGMWHFLLGDKASKRLTE ::::::::::::::::::: : .:::::::::::::::::::::::::::::: gi|331 MALRLLKLAATSASARVVAR-APALRGIHSSVQCKLRYGMWHFLLGDKASKRLTE 10 20 30 40 50 70 80 90 100 110 120 pj0166 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|331 RSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAGIHYPDSTTGDGKPLATDYNGNCSLE 60 70 80 90 100 110 130 140 150 160 170 180 pj0166 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|331 KFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYN 120 130 140 150 160 170 190 200 210 220 230 240 pj0166 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDVMQFSIKGQASL :::::::::::::::::::::::::::::::::::::::::::::::: ...: gi|331 QGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEMKITSAYLQ 180 190 200 210 220 230 pj0166 F gi|331 DIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDKGPWLKQDNRTLYHLR 240 250 260 270 280 290 241 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 13 14:06:47 2008 done: Wed Aug 13 14:09:30 2008 Total Scan time: 690.680 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]