hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-14275058/chunk_1/iprscan-20080813-14275058.nocrc
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Query sequence: pj01753
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00064                                                  13.8     0.0043   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00064    1/1       8   103 ..     1    81 []    13.8   0.0043

Alignments of top-scoring domains:
SM00064: domain 1 of 1, from 8 to 103: score 13.8, E = 0.0043
                   *->etaphWvpDeeasnClmnCgkeFtl......................
                       + + W  +  + +C ++ +    +++++++ ++ + +++   + + 
     pj01753     8    GEPRGWRQE--VRVC-SGRHRGLAFrrgpgsarpagatpgaacslpl 51   

                   .....vtrRrHHCRnCGrifCskCsskkaplpklgkekkngknedftpvR
                    + ++ ++ +HHCR CG+ fC++C+s+k+pl+ ++  +         pvR
     pj01753    52 ltanpPASAQHHCRRCGKCFCDRCCSQKVPLRRMCFVD---------PVR 92   

                   VCdsCyerlsk<-*
                    C +C     k   
     pj01753    93 QCAECALVSLK    103  

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