hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-17520208/chunk_1/iprscan-20090416-17520208.nocrc
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Query sequence: pj01758
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF04389.7.fs  Peptidase family M28                       59.2    1.9e-17   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF04389.7.fs    1/1       1    54 [.   156   225 .]    59.2  1.9e-17

Alignments of top-scoring domains:
PF04389.7.fs: domain 1 of 1, from 1 to 54: score 59.2, E = 1.9e-17
                   *->ldvfqegggpgrsDhapFlndkaGvPgLdfaagpnkdgqaagggtag
                      ++vfq+g +p+++D+++++ d +++Pg+d+a+ +n            
     pj01758     1    QEVFQSGIIPSDTDFRIYR-DFGNIPGIDLAFIEN------------ 34   

                   dafgpvYHTpaDtldnidldtlq<-*
                      g+ YHT++Dt+d+i  d++q   
     pj01758    35 ---GYIYHTKYDTADRILTDSIQ    54   

//