hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-14452882/chunk_1/iprscan-20080813-14452882.nocrc
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Query sequence: pj01912
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00454                                                  59.0    6.1e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00454    1/1     430   495 ..     1    67 []    59.0  6.1e-13

Alignments of top-scoring domains:
SM00454: domain 1 of 1, from 430 to 495: score 59.0, E = 6.1e-13
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeelllltseedLkel
                      +++ + +++ e L++++l++  d+F+k+++d e+l+l+t + dL+e+
     pj01912   430    MDqGDTPTLEEDLKKLQLSEFFDIFEKEKVDKEALALCT-DRDLQEI 475  

                   GitllGhRkkIlsaiqklkeq<-*
                   Gi +lG+RkkIl+ +++ k++   
     pj01912   476 GI-PLGPRKKILNYFSTRKNS    495  

//