hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-14505513/chunk_1/iprscan-20080813-14505513.nocrc
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Query sequence: pj01914
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00293                                                  96.9    2.3e-24   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00293    1/1     320   378 ..     1    84 []    96.9  2.3e-24

Alignments of top-scoring domains:
SM00293: domain 1 of 1, from 320 to 378: score 96.9, E = 2.3e-24
                   *->fkpGDlVwAKmkGFPwWPAlvvspketpsnirktgvviphpplevlk
                      f++G+lVw+K +GF+wWP ++vs+++t+                   
     pj01914   320    FGIGELVWGKLRGFSWWPGRIVSWWMTG------------------- 347  

                   leeeaknkrkenlypVlFFgdkdtrawvsssklfPLt<-*
                        +++++e++++V++Fgd+++ ++v+ +kl+PL    
     pj01914   348 -----RSRAAEGTRWVMWFGDGKF-SVVCVEKLMPLS    378  

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