# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Opj02565.fasta.nr -Q pj02565.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 pj02565, 651 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6836856 sequences Expectation_n fit: rho(ln(x))= 6.2336+/-0.000201; mu= 8.4673+/- 0.011 mean_var=118.8953+/-22.700, 0's: 35 Z-trim: 46 B-trim: 164 in 2/66 Lambda= 0.117623 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088470|dbj|BAD92682.1| ras inhibitor RIN1 var ( 651) 4357 750.6 3.2e-214 gi|116242760|sp|Q13671|RIN1_HUMAN Ras and Rab inte ( 783) 4003 690.6 4.5e-196 gi|1695233|gb|AAB67270.1| ras interactor [Homo sap ( 783) 3953 682.1 1.6e-193 gi|109105300|ref|XP_001110464.1| PREDICTED: simila ( 783) 3849 664.5 3.3e-188 gi|194218491|ref|XP_001916910.1| PREDICTED: Ras an ( 747) 3356 580.8 4.9e-163 gi|76658104|ref|XP_586228.2| PREDICTED: similar to ( 790) 3305 572.1 2.1e-160 gi|194387484|dbj|BAG60106.1| unnamed protein produ ( 605) 3250 562.7 1.1e-157 gi|28202254|sp|P97680|RIN1_RAT Ras and Rab interac ( 774) 3035 526.3 1.3e-146 gi|1724122|gb|AAB58256.1| RIN1 [Rattus norvegicus] ( 798) 3035 526.3 1.3e-146 gi|28201877|sp|Q921Q7|RIN1_MOUSE Ras and Rab inter ( 763) 3026 524.8 3.6e-146 gi|148701147|gb|EDL33094.1| Ras and Rab interactor ( 787) 3026 524.8 3.7e-146 gi|148701148|gb|EDL33095.1| Ras and Rab interactor ( 798) 3026 524.8 3.7e-146 gi|149062028|gb|EDM12451.1| Ras and Rab interactor ( 787) 3022 524.1 5.9e-146 gi|149062027|gb|EDM12450.1| Ras and Rab interactor ( 798) 3022 524.1 5.9e-146 gi|73983641|ref|XP_854744.1| PREDICTED: similar to ( 731) 2765 480.5 7.5e-133 gi|149451057|ref|XP_001521840.1| PREDICTED: simila ( 619) 2321 405.1 3.2e-110 gi|194376398|dbj|BAG62958.1| unnamed protein produ ( 414) 1971 345.5 1.8e-92 gi|125833299|ref|XP_001345314.1| PREDICTED: simila ( 938) 766 141.4 1.2e-30 gi|74222708|dbj|BAE42223.1| unnamed protein produc ( 447) 724 133.9 9.5e-29 gi|74181722|dbj|BAE32573.1| unnamed protein produc ( 447) 724 133.9 9.5e-29 gi|13529644|gb|AAH05529.1| Rin2 protein [Mus muscu ( 463) 724 134.0 9.7e-29 gi|12852474|dbj|BAB29425.1| unnamed protein produc ( 463) 724 134.0 9.7e-29 gi|50738586|ref|XP_419317.1| PREDICTED: similar to ( 891) 727 134.7 1.1e-28 gi|74188152|dbj|BAE37170.1| unnamed protein produc ( 649) 724 134.1 1.2e-28 gi|151556174|gb|AAI49031.1| MGC152020 protein [Bos ( 909) 726 134.6 1.3e-28 gi|74225284|dbj|BAE31576.1| unnamed protein produc ( 858) 724 134.2 1.5e-28 gi|148696538|gb|EDL28485.1| Ras and Rab interactor ( 858) 724 134.2 1.5e-28 gi|112180459|gb|AAH40390.3| Ras and Rab interactor ( 858) 724 134.2 1.5e-28 gi|149041210|gb|EDL95143.1| Ras and Rab interactor ( 880) 724 134.2 1.6e-28 gi|149041211|gb|EDL95144.1| Ras and Rab interactor ( 902) 724 134.2 1.6e-28 gi|32171711|sp|Q9D684|RIN2_MOUSE Ras and Rab inter ( 903) 724 134.2 1.6e-28 gi|148696537|gb|EDL28484.1| Ras and Rab interactor ( 903) 724 134.2 1.6e-28 gi|122889620|emb|CAM14337.1| Ras and Rab interacto ( 903) 724 134.2 1.6e-28 gi|149250288|ref|XP_001473927.1| PREDICTED: simila ( 942) 724 134.2 1.6e-28 gi|73991073|ref|XP_848635.1| PREDICTED: similar to ( 863) 723 134.0 1.7e-28 gi|26333959|dbj|BAC30697.1| unnamed protein produc ( 463) 718 132.9 2e-28 gi|74207409|dbj|BAE30885.1| unnamed protein produc ( 463) 716 132.6 2.5e-28 gi|190897|gb|AAA36553.1| ras inhibitor ( 471) 715 132.4 2.8e-28 gi|194224111|ref|XP_001915583.1| PREDICTED: simila (1018) 719 133.4 3.1e-28 gi|74191465|dbj|BAE30311.1| unnamed protein produc ( 858) 717 133.0 3.5e-28 gi|114681181|ref|XP_001142889.1| PREDICTED: hypoth ( 689) 715 132.6 3.7e-28 gi|119630622|gb|EAX10217.1| Ras and Rab interactor ( 689) 715 132.6 3.7e-28 gi|126304299|ref|XP_001382102.1| PREDICTED: simila ( 896) 716 132.9 4e-28 gi|12053343|emb|CAB66858.1| hypothetical protein [ ( 861) 715 132.7 4.4e-28 gi|114681177|ref|XP_514539.2| PREDICTED: Ras and R ( 895) 715 132.7 4.5e-28 gi|28201876|sp|Q8WYP3|RIN2_HUMAN Ras and Rab inter ( 895) 715 132.7 4.5e-28 gi|114681175|ref|XP_001142726.1| PREDICTED: Ras an ( 944) 715 132.7 4.7e-28 gi|56202952|emb|CAI19340.1| Ras and Rab interactor ( 944) 715 132.7 4.7e-28 gi|109093086|ref|XP_001091075.1| PREDICTED: simila (1041) 715 132.7 5.1e-28 gi|193787744|dbj|BAG52947.1| unnamed protein produ ( 901) 714 132.5 5.1e-28 >>gi|62088470|dbj|BAD92682.1| ras inhibitor RIN1 variant (651 aa) initn: 4357 init1: 4357 opt: 4357 Z-score: 4001.0 bits: 750.6 E(): 3.2e-214 Smith-Waterman score: 4357; 100.000% identity (100.000% similar) in 651 aa overlap (1-651:1-651) 10 20 30 40 50 60 pj0256 GLPATHCTDEQAEAEGKARLAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWSSSLNIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GLPATHCTDEQAEAEGKARLAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWSSSLNIK 10 20 30 40 50 60 70 80 90 100 110 120 pj0256 AQRGPAGGPVLPQLKARSPQELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AQRGPAGGPVLPQLKARSPQELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTE 70 80 90 100 110 120 130 140 150 160 170 180 pj0256 TSSPLSPPAVPPPPVPVLPGAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TSSPLSPPAVPPPPVPVLPGAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQ 130 140 150 160 170 180 190 200 210 220 230 240 pj0256 EVDCGSPSSSEEEGVPGSRGSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EVDCGSPSSSEEEGVPGSRGSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALM 190 200 210 220 230 240 250 260 270 280 290 300 pj0256 QDRHTAAGQLVQDLLTQVRAGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 QDRHTAAGQLVQDLLTQVRAGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVL 250 260 270 280 290 300 310 320 330 340 350 360 pj0256 EKSLHCSVLKPLRPILAARLRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EKSLHCSVLKPLRPILAARLRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVEL 310 320 330 340 350 360 370 380 390 400 410 420 pj0256 EQVRQKLLQLLRTYSPSAQVKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EQVRQKLLQLLRTYSPSAQVKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDL 370 380 390 400 410 420 430 440 450 460 470 480 pj0256 PELLLEAEYMSELLEPSLLTGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PELLLEAEYMSELLEPSLLTGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSL 430 440 450 460 470 480 490 500 510 520 530 540 pj0256 WEQRRLPATHCFQHLLRVAYQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 WEQRRLPATHCFQHLLRVAYQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFG 490 500 510 520 530 540 550 560 570 580 590 600 pj0256 LFLYKEQGYHRLPPGALAHRLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LFLYKEQGYHRLPPGALAHRLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQG 550 560 570 580 590 600 610 620 630 640 650 pj0256 CQGDGDAGVKASPRDIREQSETTAEGGQGQAQEGPAQPGEPEAEGSRAAEE ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CQGDGDAGVKASPRDIREQSETTAEGGQGQAQEGPAQPGEPEAEGSRAAEE 610 620 630 640 650 >>gi|116242760|sp|Q13671|RIN1_HUMAN Ras and Rab interact (783 aa) initn: 4003 init1: 4003 opt: 4003 Z-score: 3675.3 bits: 690.6 E(): 4.5e-196 Smith-Waterman score: 4003; 99.834% identity (100.000% similar) in 602 aa overlap (50-651:182-783) 20 30 40 50 60 70 pj0256 LAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWSSSLNIKAQRGPAGGPVLPQLKARSP .::::::::::::::::::::::::::::: gi|116 RDILLLPLQLPRAIHHAATHKELEAISHLGIEFWSSSLNIKAQRGPAGGPVLPQLKARSP 160 170 180 190 200 210 80 90 100 110 120 130 pj0256 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP 220 230 240 250 260 270 140 150 160 170 180 190 pj0256 GAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 GAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGSR 280 290 300 310 320 330 200 210 220 230 240 250 pj0256 GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVR 340 350 360 370 380 390 260 270 280 290 300 310 pj0256 AGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVLEKSLHCSVLKPLRPILAAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 AGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVLEKSLHCSVLKPLRPILAAR 400 410 420 430 440 450 320 330 340 350 360 370 pj0256 LRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYSPSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 LRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYSPSAQ 460 470 480 490 500 510 380 390 400 410 420 430 pj0256 VKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLEPSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 VKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLEPSLL 520 530 540 550 560 570 440 450 460 470 480 490 pj0256 TGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHLLRVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 TGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHLLRVA 580 590 600 610 620 630 500 510 520 530 540 550 pj0256 YQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPGALAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 YQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPGALAH 640 650 660 670 680 690 560 570 580 590 600 610 pj0256 RLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQGCQGDGDAGVKASPRDIREQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|116 RLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQGCQGDGDAGVKASPRDIREQ 700 710 720 730 740 750 620 630 640 650 pj0256 SETTAEGGQGQAQEGPAQPGEPEAEGSRAAEE :::::::::::::::::::::::::::::::: gi|116 SETTAEGGQGQAQEGPAQPGEPEAEGSRAAEE 760 770 780 >>gi|1695233|gb|AAB67270.1| ras interactor [Homo sapiens (783 aa) initn: 3953 init1: 3953 opt: 3953 Z-score: 3629.4 bits: 682.1 E(): 1.6e-193 Smith-Waterman score: 3953; 98.505% identity (99.502% similar) in 602 aa overlap (50-651:182-783) 20 30 40 50 60 70 pj0256 LAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWSSSLNIKAQRGPAGGPVLPQLKARSP .::::::::::::::::::::::::::::: gi|169 RDILLLPLQLPRAIHHAATHKELEAISHLGIEFWSSSLNIKAQRGPAGGPVLPQLKARSP 160 170 180 190 200 210 80 90 100 110 120 130 pj0256 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP 220 230 240 250 260 270 140 150 160 170 180 190 pj0256 GAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 GAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGSR 280 290 300 310 320 330 200 210 220 230 240 250 pj0256 GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVR 340 350 360 370 380 390 260 270 280 290 300 310 pj0256 AGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVLEKSLHCSVLKPLRPILAAR : .::::.::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|169 DGQRPQELEGIRQALSRARAMLSAELGPEKLVSPKRLEHVLEKSLHCSVLKPLRPILAAR 400 410 420 430 440 450 320 330 340 350 360 370 pj0256 LRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYSPSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|169 LRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLVRTYSPSAQ 460 470 480 490 500 510 380 390 400 410 420 430 pj0256 VKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLEPSLL ::::::::::::::::::::::.::: ::::::::::::::::::::::::::::::::: gi|169 VKRLLQACKLLYMALRTQEGEGSGADGFLPLLSLVLAHCDLPELLLEAEYMSELLEPSLL 520 530 540 550 560 570 440 450 460 470 480 490 pj0256 TGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHLLRVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 TGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHLLRVA 580 590 600 610 620 630 500 510 520 530 540 550 pj0256 YQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPGALAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 YQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPGALAH 640 650 660 670 680 690 560 570 580 590 600 610 pj0256 RLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQGCQGDGDAGVKASPRDIREQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|169 RLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQGCQGDGDAGVKASPRDIREQ 700 710 720 730 740 750 620 630 640 650 pj0256 SETTAEGGQGQAQEGPAQPGEPEAEGSRAAEE :::::::::::::::::::::::::::::::: gi|169 SETTAEGGQGQAQEGPAQPGEPEAEGSRAAEE 760 770 780 >>gi|109105300|ref|XP_001110464.1| PREDICTED: similar to (783 aa) initn: 3849 init1: 3849 opt: 3849 Z-score: 3534.1 bits: 664.5 E(): 3.3e-188 Smith-Waterman score: 3849; 96.013% identity (98.505% similar) in 602 aa overlap (50-651:182-783) 20 30 40 50 60 70 pj0256 LAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWSSSLNIKAQRGPAGGPVLPQLKARSP .::::::::::::::::::::::::::::: gi|109 RDILLLPLQLPRAIHRAATHKELEAISHLGIEFWSSSLNIKAQRGPAGGPVLPQLKARSP 160 170 180 190 200 210 80 90 100 110 120 130 pj0256 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP 220 230 240 250 260 270 140 150 160 170 180 190 pj0256 GAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGSR :::::::::::::::::::::::::::::. ::::::::::::::::::::::::.:::: gi|109 GAVPSQTERLPPCQLLRRESSVGYRVPAGGDPSLPPMPSLQEVDCGSPSSSEEEGAPGSR 280 290 300 310 320 330 200 210 220 230 240 250 pj0256 GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVR 340 350 360 370 380 390 260 270 280 290 300 310 pj0256 AGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVLEKSLHCSVLKPLRPILAAR :::::::::::::::::::::::.:::::::: ::::::::::::: ::::::::::::: gi|109 AGPEPQELQGIRQALSRARAMLSVELGPEKLLPPKRLEHVLEKSLHRSVLKPLRPILAAR 400 410 420 430 440 450 320 330 340 350 360 370 pj0256 LRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYSPSAQ .:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|109 VRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVEMEQVRQKLLQLLRTYSPSAQ 460 470 480 490 500 510 380 390 400 410 420 430 pj0256 VKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLEPSLL ::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::: gi|109 VKRLLQACKLLYMALRTQEGEDAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLEPSLL 520 530 540 550 560 570 440 450 460 470 480 490 pj0256 TGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHLLRVA ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|109 TGEGGYYLTSLSASLALLSGLGQAHTLPLSPSQELRRSLSLWEQRRLPATHCFQHLLRVA 580 590 600 610 620 630 500 510 520 530 540 550 pj0256 YQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPGALAH ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::. gi|109 YQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKDQGYHRLPPGALAR 640 650 660 670 680 690 560 570 580 590 600 610 pj0256 RLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQGCQGDGDAGVKASPRDIREQ ::::::::::::::::::: :.::.:: ::::::::::::::::: :::::::::: ::. gi|109 RLPTTGYLVYRRAEWPETQEAATEKEGRGQSEARSRGEEQGCQGDEDAGVKASPRDTREE 700 710 720 730 740 750 620 630 640 650 pj0256 SETTAEGGQGQAQEGPAQPGEPEAEGSRAAEE :.::::::::.:.::::::::::::::.:::: gi|109 SDTTAEGGQGRAREGPAQPGEPEAEGSQAAEE 760 770 780 >>gi|194218491|ref|XP_001916910.1| PREDICTED: Ras and Ra (747 aa) initn: 3336 init1: 3256 opt: 3356 Z-score: 3082.2 bits: 580.8 E(): 4.9e-163 Smith-Waterman score: 3356; 84.793% identity (93.223% similar) in 605 aa overlap (50-651:143-747) 20 30 40 50 60 70 pj0256 LAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWSSSLNIKAQRGPAGGPVLPQLKARSP .:::::::: ::: ::. ::.::.::.::: gi|194 RDILLLPLQLPRAIRLAATHKELEAISHLGIEFWSSSLNTKAQPGPSDGPLLPRLKSRSP 120 130 140 150 160 170 80 90 100 110 120 130 pj0256 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|194 QELDQGTGAALCFFNPLFPGDLGPTKREKFKTSFKVRVSTETSSPLSPPAVPPPPVPVLP 180 190 200 210 220 230 140 150 160 170 180 190 pj0256 GAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGSR :.:.::::::: ::::::::::::::.:.::::::.:::::::: :::::::::.:::. gi|194 RAAPNQTERLPPRQLLRRESSVGYRVPGGAGPSLPPLPSLQEVDCCSPSSSEEEGAPGSQ 240 250 260 270 280 290 200 210 220 230 240 250 pj0256 GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVR :::.:::.:::: ::::::::::::::::::::::::::::.:::::.:::::::::::: gi|194 GSPVTSPRLGRRPPLLRSMSAAFCSLLAPERQVGRAAAALMHDRHTAVGQLVQDLLTQVR 300 310 320 330 340 350 260 270 280 290 300 310 pj0256 AGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVLEKSLHCSVLKPLRPILAAR :::::.::::::.::::::::::::::::::: :.::: ::::::: ::::::::::::: gi|194 AGPEPRELQGIREALSRARAMLSAELGPEKLLPPERLECVLEKSLHRSVLKPLRPILAAR 360 370 380 390 400 410 320 330 340 350 360 370 pj0256 LRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYSPSAQ :::::.:.:::::::::::::::::: :::::::::::::.::::::::::::.:::::: gi|194 LRRRLSANGSLGRLAEGLRLARAQGPRAFGSHLSLPSPVEMEQVRQKLLQLLRAYSPSAQ 420 430 440 450 460 470 380 390 400 410 420 430 pj0256 VKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLEPSLL :: ::::::::: ::::. ::::::::::::::.:::.:.:::::::::::::::::.:: gi|194 VKWLLQACKLLYTALRTHAGEGAGADEFLPLLSIVLAQCNLPELLLEAEYMSELLEPALL 480 490 500 510 520 530 440 450 460 470 480 490 pj0256 TGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHLLRVA :::::::::.:::::::::.::::::::::: :::.:::::::::::::.: :::::::: gi|194 TGEGGYYLTTLSASLALLSSLGQAHTLPLSPSQELQRSLSLWEQRRLPASHSFQHLLRVA 540 550 560 570 580 590 500 510 520 530 540 550 pj0256 YQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPGALAH ::::::::::::::::: ::::::::::::::::.::..:::::::::::.::::::::: gi|194 YQDPSSGCTSKTLAVPPGASIATLNQLCATKFRVSQPDAFGLFLYKEQGYRRLPPGALAH 600 610 620 630 640 650 560 570 580 590 600 610 pj0256 RLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQGCQGDGDAGVKASPRDIREQ ::::::::::::: ::: :.. . .. :. : :. :..: ::::. :::: :: : . gi|194 GLPTTGYLVYRRAERPETPGGLQQGRAIGEPEPGSKEEKKGGPGDGDTEVKASARDSRAE 660 670 680 690 700 710 620 630 640 650 pj0256 SETTA---EGGQGQAQEGPAQPGEPEAEGSRAAEE :: :: :::.:::. : :::: :::.::.:::: gi|194 SERTAQGAEGGEGQARGGSAQPGGPEAKGSQAAEE 720 730 740 >>gi|76658104|ref|XP_586228.2| PREDICTED: similar to Ras (790 aa) initn: 3225 init1: 2157 opt: 3305 Z-score: 3035.1 bits: 572.1 E(): 2.1e-160 Smith-Waterman score: 3305; 83.908% identity (92.611% similar) in 609 aa overlap (50-651:182-790) 20 30 40 50 60 70 pj0256 LAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWSSSLNIKAQRGPAGGPVLPQLKARSP .:::::::: ::: ::. :: ::.:: : : gi|766 RDILLLPLQLPRAIRQAATHKELEAISHLGMEFWSSSLNTKAQPGPSEGPPLPRLKPRPP 160 170 180 190 200 210 80 90 100 110 120 130 pj0256 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|766 QELDQGTGAALCFFNPLFPGDLGHTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP 220 230 240 250 260 270 140 150 160 170 180 190 pj0256 GAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEG-VPGS :.::.::::::: ::::::::::::::.:.::::::.::::::::.::::::::: :::: gi|766 GTVPNQTERLPPRQLLRRESSVGYRVPGGAGPSLPPLPSLQEVDCASPSSSEEEGGVPGS 280 290 300 310 320 330 200 210 220 230 240 250 pj0256 RGSPATSPHLG---RRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLL .:::::::::: :::::::::::::::::::::::::::::: ::::::.:::::::: gi|766 QGSPATSPHLGYRRRRRPLLRSMSAAFCSLLAPERQVGRAAAALTQDRHTAVGQLVQDLL 340 350 360 370 380 390 260 270 280 290 300 310 pj0256 TQVRAGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVLEKSLHCSVLKPLRPI :::::.:::.:::..:.:::::::::::::.::::::: :::.::::::: ::::::::: gi|766 TQVRASPEPRELQAVREALSRARAMLSAELSPEKLLSPDRLEQVLEKSLHRSVLKPLRPI 400 410 420 430 440 450 320 330 340 350 360 370 pj0256 LAARLRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYS :.::::.::.:..::::::::::::::.: .:::::::::::::.::::::::::::.:: gi|766 LVARLRHRLSANSSLGRLAEGLRLARARGASAFGSHLSLPSPVEMEQVRQKLLQLLRAYS 460 470 480 490 500 510 380 390 400 410 420 430 pj0256 PSAQVKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLE :::::::::::::::: ::::: ::::::::::::::::::::::::::::::::::::: gi|766 PSAQVKRLLQACKLLYTALRTQAGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLE 520 530 540 550 560 570 440 450 460 470 480 490 pj0256 PSLLTGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHL :.::::::::::::::::::::::: .:::::::: :::.:::::::::::::::::::: gi|766 PALLTGEGGYYLTSLSASLALLSGLTEAHTLPLSPSQELQRSLSLWEQRRLPATHCFQHL 580 590 600 610 620 630 500 510 520 530 540 550 pj0256 LRVAYQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPG :::::::::::::::::::::::::::::.:::::::::.:.:::::::: : :.::::: gi|766 LRVAYQDPSSGCTSKTLAVPPEASIATLNKLCATKFRVTHPDTFGLFLYKGQDYQRLPPG 640 650 660 670 680 690 560 570 580 590 600 610 pj0256 ALAHRLPTTGYLVYRRAEWPETQGA---VTEEEGSGQSEARSRGEEQGCQGDGDAGVKAS ::::::::.::::::::: ::: :: .. :::: :: .: :.. .: :.. .:.: gi|766 ALAHRLPTAGYLVYRRAEQPETPGASPGAATGEGSGGPEAGDREEDKEGRGTGETKAKTS 700 710 720 730 740 750 620 630 640 650 pj0256 PRDIREQSETTAEGGQGQAQEGPAQPGEPEAEGSRAAEE ::: : .:::.:::.. ::. :.:: ::.: :.:::: gi|766 PRDGRGESETVAEGAEDQARGDPTQPRGPETEESQAAEE 760 770 780 790 >>gi|194387484|dbj|BAG60106.1| unnamed protein product [ (605 aa) initn: 3323 init1: 3244 opt: 3250 Z-score: 2986.2 bits: 562.7 E(): 1.1e-157 Smith-Waterman score: 3250; 98.207% identity (98.805% similar) in 502 aa overlap (50-551:77-575) 20 30 40 50 60 70 pj0256 LAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWSSSLNIKAQRGPAGGPVLPQLKARSP .::::::::::::::::::::::::::::: gi|194 RDILLLPLQLPRAIHHAATHKELEAISHLGIEFWSSSLNIKAQRGPAGGPVLPQLKARSP 50 60 70 80 90 100 80 90 100 110 120 130 pj0256 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP 110 120 130 140 150 160 140 150 160 170 180 190 pj0256 GAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GAVPSQTERLPPCQLLRRESSVGYRVPAGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGSR 170 180 190 200 210 220 200 210 220 230 240 250 pj0256 GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GSPATSPHLGRRRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLLTQVR 230 240 250 260 270 280 260 270 280 290 300 310 pj0256 AGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVLEKSLHCSVLKPLRPILAAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVLEKSLHCSVLKPLRPILAAR 290 300 310 320 330 340 320 330 340 350 360 370 pj0256 LRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYSPSAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYSPSAQ 350 360 370 380 390 400 380 390 400 410 420 430 pj0256 VKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLEPSLL ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|194 VKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSEQLEPSLL 410 420 430 440 450 460 440 450 460 470 480 490 pj0256 TGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHLLRVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHLLRVA 470 480 490 500 510 520 500 510 520 530 540 550 pj0256 YQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPGALAH ::::::::::::::::::::::::::::::::::::::::::. :: .: gi|194 YQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLL---SQGNQRQREAGQQR 530 540 550 560 570 580 560 570 580 590 600 610 pj0256 RLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQGCQGDGDAGVKASPRDIREQ gi|194 SSLKWPEGSFGAGDPEPAEKSF 590 600 >>gi|28202254|sp|P97680|RIN1_RAT Ras and Rab interactor (774 aa) initn: 3054 init1: 2276 opt: 3035 Z-score: 2787.6 bits: 526.3 E(): 1.3e-146 Smith-Waterman score: 3035; 76.763% identity (87.981% similar) in 624 aa overlap (25-644:157-773) 10 20 30 40 50 pj0256 GLPATHCTDEQAEAEGKARLAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWS : ::: ... .. . : ..:::: gi|282 GISLEGSELTFPDLVQLICAYCHTRDILLLPLPLPRAIHQAATHKELEAIS-HLGMEFWS 130 140 150 160 170 180 60 70 80 90 100 110 pj0256 SSLNIKAQRGPAGGPVLPQLKARSPQELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFK :::: : :. :. .: .:.::::::::::::::::::::::::::::::::::::::::: gi|282 SSLNTKNQQRPSEAPQIPRLKARSPQELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFK 190 200 210 220 230 240 120 130 140 150 160 170 pj0256 VRVSTETSSPLSPPAVPPPPVPVLPGAVPSQTERLPPCQLLRRESSVGYRVP-AGSGPSL ::::::::::::::::::::::::::. :::::::: :::.:::::::::: ..::::: gi|282 VRVSTETSSPLSPPAVPPPPVPVLPGTSSSQTERLPPRQLLQRESSVGYRVPGSASGPSL 250 260 270 280 290 300 180 190 200 210 220 230 pj0256 PPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHLGR---RRPLLRSMSAAFCSLLAPER ::.:::::::: ::::::::: : :::.:::.:.: :::::::::.:::::::::: gi|282 PPLPSLQEVDCCSPSSSEEEG---SSGSPTTSPRLSRPRHRRPLLRSMSSAFCSLLAPER 310 320 330 340 350 360 240 250 260 270 280 290 pj0256 QVGRAAAALMQDRHTAAGQLVQDLLTQVRAGPEPQELQGIRQALSRARAMLSAELGPEKL ::::::. :::.:.::.::::::::::::.::: .::::::::::::::::::::::::: gi|282 QVGRAATMLMQNRYTAVGQLVQDLLTQVRVGPESRELQGIRQALSRARAMLSAELGPEKL 370 380 390 400 410 420 300 310 320 330 340 350 pj0256 LSPKRLEHVLEKSLHCSVLKPLRPILAARLRRRLAADGSLGRLAEGLRLARAQGPGAFGS : :.::: ::::::: ::::::::::::::::::..::::::::::.::::.:::::::: gi|282 LPPERLELVLEKSLHRSVLKPLRPILAARLRRRLSTDGSLGRLAEGFRLARTQGPGAFGS 430 440 450 460 470 480 360 370 380 390 400 410 pj0256 HLSLPSPVELEQVRQKLLQLLRTYSPSAQVKRLLQACKLLYMALRTQEGEGAGADEFLPL ::.: ::::.: ::::::::::.::::::.: ::::::::: ::.:: ::.::::::::: gi|282 HLNLSSPVEIEPVRQKLLQLLRAYSPSAQIKWLLQACKLLYTALKTQAGENAGADEFLPL 490 500 510 520 530 540 420 430 440 450 460 470 pj0256 LSLVLAHCDLPELLLEAEYMSELLEPSLLTGEGGYYLTSLSASLALLSGLGQAHTLPLSP ::::::.::::.::::::::::::::.:::::::::::::::::::::::.:::.::::: gi|282 LSLVLAQCDLPDLLLEAEYMSELLEPTLLTGEGGYYLTSLSASLALLSGLSQAHALPLSP 550 560 570 580 590 600 480 490 500 510 520 530 pj0256 VQELRRSLSLWEQRRLPATHCFQHLLRVAYQDPSSGCTSKTLAVPPEASIATLNQLCATK .:::.:::.::::::::::: :::::::::::::.::::::::::: .:::::.:::::: gi|282 AQELQRSLALWEQRRLPATHNFQHLLRVAYQDPSTGCTSKTLAVPPGSSIATLSQLCATK 610 620 630 640 650 660 540 550 560 570 580 590 pj0256 FRVTQPNTFGLFLYKEQGYHRLPPGALAHRLPTTGYLVYRRAEWPETQGAVTEEEGSGQS ::::::..:::::::.:::::::: ::.:::::::::.::::: :::: :.::. .: . gi|282 FRVTQPDAFGLFLYKDQGYHRLPPEALVHRLPTTGYLIYRRAERPETQRAATEKTKTG-N 670 680 690 700 710 720 600 610 620 630 640 650 pj0256 EARSRGEEQGCQGDGDAGVKASPRDIREQSETTAEGGQGQAQEGPAQPGEPEAEGSRAAE : :: . .: : : : . .... :.::. : .: :. : : : gi|282 ERPERGAWEEEKG-GLNGEGKSEIAVDQEGKDQARGGHMQLEEQKAE-GCPALEE 730 740 750 760 770 pj0256 E >>gi|1724122|gb|AAB58256.1| RIN1 [Rattus norvegicus] (798 aa) initn: 3054 init1: 2276 opt: 3035 Z-score: 2787.4 bits: 526.3 E(): 1.3e-146 Smith-Waterman score: 3035; 76.763% identity (87.981% similar) in 624 aa overlap (25-644:181-797) 10 20 30 40 50 pj0256 GLPATHCTDEQAEAEGKARLAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWS : ::: ... .. . : ..:::: gi|172 GISLEGSELTFPDLVQLICAYCHTRDILLLPLPLPRAIHQAATHKELEAIS-HLGMEFWS 160 170 180 190 200 60 70 80 90 100 110 pj0256 SSLNIKAQRGPAGGPVLPQLKARSPQELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFK :::: : :. :. .: .:.::::::::::::::::::::::::::::::::::::::::: gi|172 SSLNTKNQQRPSEAPQIPRLKARSPQELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFK 210 220 230 240 250 260 120 130 140 150 160 170 pj0256 VRVSTETSSPLSPPAVPPPPVPVLPGAVPSQTERLPPCQLLRRESSVGYRVP-AGSGPSL ::::::::::::::::::::::::::. :::::::: :::.:::::::::: ..::::: gi|172 VRVSTETSSPLSPPAVPPPPVPVLPGTSSSQTERLPPRQLLQRESSVGYRVPGSASGPSL 270 280 290 300 310 320 180 190 200 210 220 230 pj0256 PPMPSLQEVDCGSPSSSEEEGVPGSRGSPATSPHLGR---RRPLLRSMSAAFCSLLAPER ::.:::::::: ::::::::: : :::.:::.:.: :::::::::.:::::::::: gi|172 PPLPSLQEVDCCSPSSSEEEG---SSGSPTTSPRLSRPRHRRPLLRSMSSAFCSLLAPER 330 340 350 360 370 380 240 250 260 270 280 290 pj0256 QVGRAAAALMQDRHTAAGQLVQDLLTQVRAGPEPQELQGIRQALSRARAMLSAELGPEKL ::::::. :::.:.::.::::::::::::.::: .::::::::::::::::::::::::: gi|172 QVGRAATMLMQNRYTAVGQLVQDLLTQVRVGPESRELQGIRQALSRARAMLSAELGPEKL 390 400 410 420 430 440 300 310 320 330 340 350 pj0256 LSPKRLEHVLEKSLHCSVLKPLRPILAARLRRRLAADGSLGRLAEGLRLARAQGPGAFGS : :.::: ::::::: ::::::::::::::::::..::::::::::.::::.:::::::: gi|172 LPPERLELVLEKSLHRSVLKPLRPILAARLRRRLSTDGSLGRLAEGFRLARTQGPGAFGS 450 460 470 480 490 500 360 370 380 390 400 410 pj0256 HLSLPSPVELEQVRQKLLQLLRTYSPSAQVKRLLQACKLLYMALRTQEGEGAGADEFLPL ::.: ::::.: ::::::::::.::::::.: ::::::::: ::.:: ::.::::::::: gi|172 HLNLSSPVEIEPVRQKLLQLLRAYSPSAQIKWLLQACKLLYTALKTQAGENAGADEFLPL 510 520 530 540 550 560 420 430 440 450 460 470 pj0256 LSLVLAHCDLPELLLEAEYMSELLEPSLLTGEGGYYLTSLSASLALLSGLGQAHTLPLSP ::::::.::::.::::::::::::::.:::::::::::::::::::::::.:::.::::: gi|172 LSLVLAQCDLPDLLLEAEYMSELLEPTLLTGEGGYYLTSLSASLALLSGLSQAHALPLSP 570 580 590 600 610 620 480 490 500 510 520 530 pj0256 VQELRRSLSLWEQRRLPATHCFQHLLRVAYQDPSSGCTSKTLAVPPEASIATLNQLCATK .:::.:::.::::::::::: :::::::::::::.::::::::::: .:::::.:::::: gi|172 AQELQRSLALWEQRRLPATHNFQHLLRVAYQDPSTGCTSKTLAVPPGSSIATLSQLCATK 630 640 650 660 670 680 540 550 560 570 580 590 pj0256 FRVTQPNTFGLFLYKEQGYHRLPPGALAHRLPTTGYLVYRRAEWPETQGAVTEEEGSGQS ::::::..:::::::.:::::::: ::.:::::::::.::::: :::: :.::. .: . gi|172 FRVTQPDAFGLFLYKDQGYHRLPPEALVHRLPTTGYLIYRRAERPETQRAATEKTKTG-N 690 700 710 720 730 740 600 610 620 630 640 650 pj0256 EARSRGEEQGCQGDGDAGVKASPRDIREQSETTAEGGQGQAQEGPAQPGEPEAEGSRAAE : :: . .: : : : . .... :.::. : .: :. : : : gi|172 ERPERGAWEEEKG-GLNGEGKSEIAVDQEGKDQARGGHMQLEEQKAE-GCPALEE 750 760 770 780 790 pj0256 E >>gi|28201877|sp|Q921Q7|RIN1_MOUSE Ras and Rab interacto (763 aa) initn: 3091 init1: 2279 opt: 3026 Z-score: 2779.4 bits: 524.8 E(): 3.6e-146 Smith-Waterman score: 3060; 78.947% identity (89.309% similar) in 608 aa overlap (50-651:170-763) 20 30 40 50 60 70 pj0256 LAAYRPKPLPCLGWETSPNQSRRPQSVSCSLEFWSSSLNIKAQRGPAGGPVLPQLKARSP .:::::::: : :. :. .: .:.:::::: gi|282 LVQLICGYCRTRAIHQAATHKELEAISHLGMEFWSSSLNTKDQQRPSEAPPIPRLKARSP 140 150 160 170 180 190 80 90 100 110 120 130 pj0256 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 QELDQGTGAALCFFNPLFPGDLGPTKREKFKRSFKVRVSTETSSPLSPPAVPPPPVPVLP 200 210 220 230 240 250 140 150 160 170 180 190 pj0256 GAVPSQTERLPPCQLLRRESSVGYRVP-AGSGPSLPPMPSLQEVDCGSPSSSEEEGVPGS :. :::::::: :::.:::::::::: ....: :::.:::::::: ::::::::: : gi|282 GTSSSQTERLPPRQLLQRESSVGYRVPGSAASPCLPPLPSLQEVDCCSPSSSEEEG---S 260 270 280 290 300 310 200 210 220 230 240 250 pj0256 RGSPATSPHLGR---RRPLLRSMSAAFCSLLAPERQVGRAAAALMQDRHTAAGQLVQDLL :::.:::.:.: :::::::::.::::::::::::::::. :::.:.::.:::::::: gi|282 SGSPTTSPRLSRPRHRRPLLRSMSSAFCSLLAPERQVGRAATMLMQNRYTAVGQLVQDLL 320 330 340 350 360 370 260 270 280 290 300 310 pj0256 TQVRAGPEPQELQGIRQALSRARAMLSAELGPEKLLSPKRLEHVLEKSLHCSVLKPLRPI :::::::::.:::::::::::::::::::::::::: :.::: ::::::: ::::::::: gi|282 TQVRAGPEPRELQGIRQALSRARAMLSAELGPEKLLPPERLELVLEKSLHRSVLKPLRPI 380 390 400 410 420 430 320 330 340 350 360 370 pj0256 LAARLRRRLAADGSLGRLAEGLRLARAQGPGAFGSHLSLPSPVELEQVRQKLLQLLRTYS :::::::::.:::::::::::.::::.::::::::::.: :::: ::::::::::::.:: gi|282 LAARLRRRLSADGSLGRLAEGFRLARTQGPGAFGSHLTLSSPVETEQVRQKLLQLLRAYS 440 450 460 470 480 490 380 390 400 410 420 430 pj0256 PSAQVKRLLQACKLLYMALRTQEGEGAGADEFLPLLSLVLAHCDLPELLLEAEYMSELLE :::::: ::::::::: ::..: ::.:::::::::::::::.::::.::::::::::::: gi|282 PSAQVKWLLQACKLLYTALKSQAGENAGADEFLPLLSLVLAQCDLPDLLLEAEYMSELLE 500 510 520 530 540 550 440 450 460 470 480 490 pj0256 PSLLTGEGGYYLTSLSASLALLSGLGQAHTLPLSPVQELRRSLSLWEQRRLPATHCFQHL :.:::::::::::::::::::::::.::..:::::.:::.:::.::::::::::: :::: gi|282 PTLLTGEGGYYLTSLSASLALLSGLSQARALPLSPAQELQRSLALWEQRRLPATHSFQHL 560 570 580 590 600 610 500 510 520 530 540 550 pj0256 LRVAYQDPSSGCTSKTLAVPPEASIATLNQLCATKFRVTQPNTFGLFLYKEQGYHRLPPG :::::::::.::::::::::: .:::::.::::::::::::..:::::::.:::::::: gi|282 LRVAYQDPSTGCTSKTLAVPPGSSIATLSQLCATKFRVTQPDAFGLFLYKDQGYHRLPPE 620 630 640 650 660 670 560 570 580 590 600 610 pj0256 ALAHRLPTTGYLVYRRAEWPETQGAVTEEEGSGQSEARSRGEEQGCQGDGDAGV--KASP :::::::.::::.::::: :::::::.:. .: :.: : : . .:. ...: gi|282 ALAHRLPATGYLIYRRAERPETQGAVAEKAKTG-----SKGPEAGAWEEETGGLNREGKP 680 690 700 710 720 730 620 630 640 650 pj0256 RDIREQSETTAEGGQGQAQEGPAQPGEPEAEGSRAAEE : .: :. ::. : : : .::::.: :: gi|282 RIAVDQE------GKDQARGGHIGPEEQKAEGSQALEE 740 750 760 651 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 13 15:23:32 2008 done: Wed Aug 13 15:25:30 2008 Total Scan time: 957.660 Total Display time: 0.260 Function used was FASTA [version 34.26.5 April 26, 2007]