# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Opj02638.fasta.nr -Q pj02638.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 pj02638, 412 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6841682 sequences Expectation_n fit: rho(ln(x))= 5.2843+/-0.000188; mu= 10.5302+/- 0.011 mean_var=81.1913+/-15.718, 0's: 42 Z-trim: 43 B-trim: 445 in 2/64 Lambda= 0.142338 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088472|dbj|BAD92683.1| Ras association domain ( 412) 2815 587.6 1.5e-165 gi|109892952|sp|Q9H2L5|RASF4_HUMAN Ras association ( 321) 1992 418.5 9.6e-115 gi|12005908|gb|AAG44666.1|AF260335_1 AD037 [Homo s ( 321) 1987 417.5 2e-114 gi|114630338|ref|XP_507760.2| PREDICTED: Ras assoc ( 321) 1972 414.4 1.7e-113 gi|109088847|ref|XP_001101344.1| PREDICTED: simila ( 321) 1949 409.6 4.4e-112 gi|114630350|ref|XP_001158548.1| PREDICTED: simila ( 282) 1797 378.4 9.9e-103 gi|73998024|ref|XP_849115.1| PREDICTED: similar to ( 321) 1768 372.5 6.8e-101 gi|149690613|ref|XP_001489587.1| PREDICTED: simila ( 321) 1758 370.4 2.8e-100 gi|194042393|ref|XP_001927919.1| PREDICTED: simila ( 321) 1733 365.3 9.8e-99 gi|81888034|sp|Q566C5|RASF4_RAT Ras association do ( 322) 1686 355.6 7.9e-96 gi|81877489|sp|Q8CB96|RASF4_MOUSE Ras association ( 322) 1680 354.4 1.9e-95 gi|38174483|gb|AAH60709.1| Ras association (RalGDS ( 322) 1669 352.2 8.9e-95 gi|114630348|ref|XP_001158041.1| PREDICTED: Ras as ( 280) 1663 350.9 1.9e-94 gi|28932867|gb|AAO61139.1| putative tumor suppress ( 251) 1658 349.8 3.5e-94 gi|114630346|ref|XP_001157984.1| PREDICTED: Ras as ( 270) 1657 349.6 4.3e-94 gi|74141156|dbj|BAE35891.1| unnamed protein produc ( 303) 1567 331.2 1.7e-88 gi|74216658|dbj|BAE37757.1| unnamed protein produc ( 303) 1558 329.3 6.2e-88 gi|55727568|emb|CAH90539.1| hypothetical protein [ ( 256) 1551 327.8 1.5e-87 gi|126272446|ref|XP_001378702.1| PREDICTED: simila ( 363) 1518 321.2 2.1e-85 gi|28932869|gb|AAO61140.1| putative tumor suppress ( 330) 1484 314.2 2.5e-83 gi|114630342|ref|XP_001158315.1| PREDICTED: Ras as ( 330) 1476 312.5 7.7e-83 gi|114630340|ref|XP_001158491.1| PREDICTED: Ras as ( 348) 1476 312.5 8.1e-83 gi|74222927|dbj|BAE42308.1| unnamed protein produc ( 288) 1453 307.8 1.8e-81 gi|109088849|ref|XP_001101245.1| PREDICTED: simila ( 330) 1448 306.8 4.2e-81 gi|92097574|gb|AAI14875.1| Ras association (RalGDS ( 304) 1352 287.0 3.4e-75 gi|114630352|ref|XP_001158213.1| PREDICTED: simila ( 218) 1280 272.1 7.4e-71 gi|159571215|emb|CAP19494.1| novel protein similar ( 325) 1146 244.8 1.9e-62 gi|73991749|ref|XP_542904.2| PREDICTED: similar to ( 326) 1146 244.8 1.9e-62 gi|51858982|gb|AAH81412.1| Zgc:101844 [Danio rerio ( 325) 1145 244.6 2.2e-62 gi|93140677|sp|Q3B7D5|RASF2_RAT Ras association do ( 326) 1143 244.1 2.9e-62 gi|149023359|gb|EDL80253.1| Ras association (RalGD ( 326) 1143 244.1 2.9e-62 gi|194044225|ref|XP_001925229.1| PREDICTED: simila ( 326) 1143 244.1 2.9e-62 gi|1723118|sp|P50749|RASF2_HUMAN Ras association d ( 326) 1142 243.9 3.4e-62 gi|114680780|ref|XP_001164287.1| PREDICTED: Ras as ( 326) 1141 243.7 3.9e-62 gi|58476770|gb|AAH89634.1| Ras association (RalGDS ( 320) 1140 243.5 4.5e-62 gi|89271861|emb|CAJ82324.1| Ras association (RalGD ( 378) 1140 243.6 5.1e-62 gi|47123196|gb|AAH70838.1| Rassf4 protein [Xenopus ( 320) 1134 242.3 1e-61 gi|81874334|sp|Q8BMS9|RASF2_MOUSE Ras association ( 326) 1132 241.9 1.4e-61 gi|62896859|dbj|BAD96370.1| Ras association domain ( 326) 1129 241.3 2.2e-61 gi|53127296|emb|CAG31031.1| hypothetical protein [ ( 324) 1125 240.4 3.8e-61 gi|126304025|ref|XP_001381717.1| PREDICTED: simila ( 331) 1110 237.4 3.3e-60 gi|47227620|emb|CAG09617.1| unnamed protein produc ( 288) 1098 234.9 1.6e-59 gi|119630851|gb|EAX10446.1| hCG1783275, isoform CR ( 307) 1089 233.0 6.1e-59 gi|90083503|dbj|BAE90834.1| unnamed protein produc ( 348) 1075 230.2 4.9e-58 gi|114630344|ref|XP_001158261.1| PREDICTED: simila ( 287) 1066 228.3 1.5e-57 gi|49256665|gb|AAH74035.1| Zgc:91855 [Danio rerio] ( 316) 942 202.9 7.7e-50 gi|134024256|gb|AAI36130.1| Rassf4 protein [Xenopu ( 313) 909 196.1 8.3e-48 gi|114634997|ref|XP_001175343.1| PREDICTED: simila ( 131) 901 194.1 1.4e-47 gi|47228869|emb|CAG09384.1| unnamed protein produc ( 473) 849 183.9 5.8e-44 gi|47228870|emb|CAG09385.1| unnamed protein produc ( 291) 826 179.0 1.1e-42 >>gi|62088472|dbj|BAD92683.1| Ras association domain fam (412 aa) initn: 2815 init1: 2815 opt: 2815 Z-score: 3127.1 bits: 587.6 E(): 1.5e-165 Smith-Waterman score: 2815; 100.000% identity (100.000% similar) in 412 aa overlap (1-412:1-412) 10 20 30 40 50 60 pj0263 GSNAGGGQGGCQGLTCDSESVGTLDILDQTQACPVSLASSSARPPCPPPGPCAEPSGCIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GSNAGGGQGGCQGLTCDSESVGTLDILDQTQACPVSLASSSARPPCPPPGPCAEPSGCIA 10 20 30 40 50 60 70 80 90 100 110 120 pj0263 MAVWSPLVMPGRREGCCHTPVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 MAVWSPLVMPGRREGCCHTPVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLK 70 80 90 100 110 120 130 140 150 160 170 180 pj0263 TYNCYHEGKSFQLRHREEEGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TYNCYHEGKSFQLRHREEEGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGR 130 140 150 160 170 180 190 200 210 220 230 240 pj0263 PSCPLKEPSPQNGNITAQGPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PSCPLKEPSPQNGNITAQGPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQR 190 200 210 220 230 240 250 260 270 280 290 300 pj0263 RPKCRAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RPKCRAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNK 250 260 270 280 290 300 310 320 330 340 350 360 pj0263 FRVEDGPSEFALYIVHESGERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FRVEDGPSEFALYIVHESGERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHE 310 320 330 340 350 360 370 380 390 400 410 pj0263 VAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK 370 380 390 400 410 >>gi|109892952|sp|Q9H2L5|RASF4_HUMAN Ras association dom (321 aa) initn: 1992 init1: 1992 opt: 1992 Z-score: 2215.2 bits: 418.5 E(): 9.6e-115 Smith-Waterman score: 1992; 98.684% identity (99.342% similar) in 304 aa overlap (109-412:18-321) 80 90 100 110 120 130 pj0263 TPVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLKTYNCYHEGKSFQLRHREE :. .:::::::::::::::::::::::::: gi|109 MKEDCLPSSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREE 10 20 30 40 140 150 160 170 180 190 pj0263 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGRPSCPLKEPSPQNGNITAQ :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|109 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPRRPSCPLKEPSPQNGNITAQ 50 60 70 80 90 100 200 210 220 230 240 250 pj0263 GPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF 110 120 130 140 150 160 260 270 280 290 300 310 pj0263 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES 170 180 190 200 210 220 320 330 340 350 360 370 pj0263 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK 230 240 250 260 270 280 380 390 400 410 pj0263 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK :::::::::::::::::::::::::::::::::: gi|109 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK 290 300 310 320 >>gi|12005908|gb|AAG44666.1|AF260335_1 AD037 [Homo sapie (321 aa) initn: 1987 init1: 1987 opt: 1987 Z-score: 2209.6 bits: 417.5 E(): 2e-114 Smith-Waterman score: 1987; 98.355% identity (99.342% similar) in 304 aa overlap (109-412:18-321) 80 90 100 110 120 130 pj0263 TPVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLKTYNCYHEGKSFQLRHREE :. .:::::::::::::::::::::::::: gi|120 MKEDCLPSSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREE 10 20 30 40 140 150 160 170 180 190 pj0263 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGRPSCPLKEPSPQNGNITAQ :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::. gi|120 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPRRPSCPLKEPSPQNGNITAK 50 60 70 80 90 100 200 210 220 230 240 250 pj0263 GPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 GPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF 110 120 130 140 150 160 260 270 280 290 300 310 pj0263 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES 170 180 190 200 210 220 320 330 340 350 360 370 pj0263 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK 230 240 250 260 270 280 380 390 400 410 pj0263 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK :::::::::::::::::::::::::::::::::: gi|120 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK 290 300 310 320 >>gi|114630338|ref|XP_507760.2| PREDICTED: Ras associati (321 aa) initn: 1972 init1: 1972 opt: 1972 Z-score: 2193.0 bits: 414.4 E(): 1.7e-113 Smith-Waterman score: 1972; 97.368% identity (99.013% similar) in 304 aa overlap (109-412:18-321) 80 90 100 110 120 130 pj0263 TPVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLKTYNCYHEGKSFQLRHREE :. .:::::::::::::::::::::::::: gi|114 MKEDCLPSSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREE 10 20 30 40 140 150 160 170 180 190 pj0263 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGRPSCPLKEPSPQNGNITAQ :::::::::::::::.::::::::::::::::::::::::: :::: ::::::::::::: gi|114 EGTLIIEGLLNIAWGVRRPIRLQMQDDREQVHLPSTSWMPGWPSCPPKEPSPQNGNITAQ 50 60 70 80 90 100 200 210 220 230 240 250 pj0263 GPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GPSIQPAHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF 110 120 130 140 150 160 260 270 280 290 300 310 pj0263 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES 170 180 190 200 210 220 320 330 340 350 360 370 pj0263 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|114 GERTKLKDCEYPLISRILHGPCEKIARMFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK 230 240 250 260 270 280 380 390 400 410 pj0263 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK :::::::::::::::::::::::::::::::::: gi|114 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK 290 300 310 320 >>gi|109088847|ref|XP_001101344.1| PREDICTED: similar to (321 aa) initn: 1949 init1: 1949 opt: 1949 Z-score: 2167.5 bits: 409.6 E(): 4.4e-112 Smith-Waterman score: 1949; 96.382% identity (98.355% similar) in 304 aa overlap (109-412:18-321) 80 90 100 110 120 130 pj0263 TPVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLKTYNCYHEGKSFQLRHREE :. .:::::::::::::::::::::::::: gi|109 MKEDCLPSSHVPISDSKSIQKSELLGLLKTYNCYHEGKSFQLRHREE 10 20 30 40 140 150 160 170 180 190 pj0263 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGRPSCPLKEPSPQNGNITAQ :::::::::::::::::::::::::::::::::::::: ::::::: ::::::.:::::: gi|109 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWTPGRPSCPPKEPSPQDGNITAQ 50 60 70 80 90 100 200 210 220 230 240 250 pj0263 GPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF ::: ::::::::::::::::::::::::::::::::::.:::: :::::::::::::::: gi|109 GPSTQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCISQRRLKCRAPGEAQRIRRHRF 110 120 130 140 150 160 260 270 280 290 300 310 pj0263 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES 170 180 190 200 210 220 320 330 340 350 360 370 pj0263 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK :::::::::::::::::::::::::::.:::::::::::::.:::::::::::::::::: gi|109 GERTKLKDCEYPLISRILHGPCEKIARMFLMEADLGVEVPHDVAQYIKFEMPVLDSFVEK 230 240 250 260 270 280 380 390 400 410 pj0263 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK :::::::::::::::::::::::::::::::::: gi|109 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK 290 300 310 320 >>gi|114630350|ref|XP_001158548.1| PREDICTED: similar to (282 aa) initn: 1797 init1: 1797 opt: 1797 Z-score: 1999.5 bits: 378.4 E(): 9.9e-103 Smith-Waterman score: 1797; 97.826% identity (99.275% similar) in 276 aa overlap (137-412:7-282) 110 120 130 140 150 160 pj0263 CLSLFRSELLGLLKTYNCYHEGKSFQLRHREEEGTLIIEGLLNIAWGLRRPIRLQMQDDR .::::::::::::::::.:::::::::::: gi|114 MMCGPPQEEGTLIIEGLLNIAWGVRRPIRLQMQDDR 10 20 30 170 180 190 200 210 220 pj0263 EQVHLPSTSWMPGRPSCPLKEPSPQNGNITAQGPSIQPVHKAESSTDSSGPLEEAEEAPQ ::::::::::::: :::: :::::::::::::::::::.::::::::::::::::::::: gi|114 EQVHLPSTSWMPGWPSCPPKEPSPQNGNITAQGPSIQPAHKAESSTDSSGPLEEAEEAPQ 40 50 60 70 80 90 230 240 250 260 270 280 pj0263 LMRTKSDASCMSQRRPKCRAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LMRTKSDASCMSQRRPKCRAPGEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNS 100 110 120 130 140 150 290 300 310 320 330 340 pj0263 TMTTLQVLTLLLNKFRVEDGPSEFALYIVHESGERTKLKDCEYPLISRILHGPCEKIARI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|114 TMTTLQVLTLLLNKFRVEDGPSEFALYIVHESGERTKLKDCEYPLISRILHGPCEKIARM 160 170 180 190 200 210 350 360 370 380 390 400 pj0263 FLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FLMEADLGVEVPHEVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLE 220 230 240 250 260 270 410 pj0263 QLVEAK :::::: gi|114 QLVEAK 280 >>gi|73998024|ref|XP_849115.1| PREDICTED: similar to Ras (321 aa) initn: 1757 init1: 1757 opt: 1768 Z-score: 1966.6 bits: 372.5 E(): 6.8e-101 Smith-Waterman score: 1768; 87.171% identity (95.066% similar) in 304 aa overlap (109-412:18-321) 80 90 100 110 120 130 pj0263 TPVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLKTYNCYHEGKSFQLRHREE :...::::.:::::::::::.::::::::: gi|739 MKEDCPPSSHVPISDSKSILKSELLSLLKTYNCYHEGRSFQLRHREE 10 20 30 40 140 150 160 170 180 190 pj0263 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGRPSCPLKEPSPQNGNITAQ ::.::::::::::::::::::::.:::::.::: : :: ::.:.: :::: ::.: .::: gi|739 EGALIIEGLLNIAWGLRRPIRLQIQDDRERVHLSSGSWTPGQPGCHLKEPLPQDGRVTAQ 50 60 70 80 90 100 200 210 220 230 240 250 pj0263 GPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF :: : ::.:::: .:: :::: ::.::::::::::.:. ::::. :.:::::::::::: gi|739 EPSSQTVHRAESSRESSEPLEEDEETPQLMRTKSDAACVIQRRPRSRTPGEAQRIRRHRF 110 120 130 140 150 160 260 270 280 290 300 310 pj0263 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES :::::::::::::::::::::::::::::::::.::::::::::::.::::::::::::: gi|739 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLHVLTLLLNKFRVENGPSEFALYIVHES 170 180 190 200 210 220 320 330 340 350 360 370 pj0263 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK :::::::::::::::::::::::::::::::::::: ::::.:::::::::::::::::: gi|739 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGEEVPHDVAQYIKFEMPVLDSFVEK 230 240 250 260 270 280 380 390 400 410 pj0263 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK :::::::::::::::::::::::::::.::::.: gi|739 LKEEEEREIIKLTMKFQALRLTMLQRLKQLVETK 290 300 310 320 >>gi|149690613|ref|XP_001489587.1| PREDICTED: similar to (321 aa) initn: 1757 init1: 1757 opt: 1758 Z-score: 1955.5 bits: 370.4 E(): 2.8e-100 Smith-Waterman score: 1758; 83.810% identity (92.698% similar) in 315 aa overlap (98-412:7-321) 70 80 90 100 110 120 pj0263 VMPGRREGCCHTPVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLKTYNCYHE : . . :...::::.:::::::::: gi|149 MKEDCPPSSHVPISNSKSILKSELLSLLKTYNCYHE 10 20 30 130 140 150 160 170 180 pj0263 GKSFQLRHREEEGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGRPSCPLKE :.:::::::::::.::::::::::::::::::::.:::::.::: ..::::::::: :: gi|149 GRSFQLRHREEEGALIIEGLLNIAWGLRRPIRLQIQDDRERVHLSAASWMPGRPSCHPKE 40 50 60 70 80 90 190 200 210 220 230 240 pj0263 PSPQNGNITAQGPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAP : :. .::: :: ::...:::: ::: ::: ::.::::::::::.:. ::::.::.: gi|149 PPLQDFRVTAQEPSAQPMQQAESSRDSSEALEEDEETPQLMRTKSDAACVIQRRPRCRTP 100 110 120 130 140 150 250 260 270 280 290 300 pj0263 GEAQRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGP ::::.:::::::::::::::::::::::::::::::::::::::.::::::::::::.:: gi|149 GEAQKIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLHVLTLLLNKFRVENGP 160 170 180 190 200 210 310 320 330 340 350 360 pj0263 SEFALYIVHESGERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKF ::::::::::::::::::::::::::::::::::::::.:::::::: ::::.::::::: gi|149 SEFALYIVHESGERTKLKDCEYPLISRILHGPCEKIARMFLMEADLGEEVPHDVAQYIKF 220 230 240 250 260 270 370 380 390 400 410 pj0263 EMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK :::::::::::::::::::::::::::::::::::.::::::::: gi|149 EMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLRRLEQLVEAK 280 290 300 310 320 >>gi|194042393|ref|XP_001927919.1| PREDICTED: similar to (321 aa) initn: 1733 init1: 1733 opt: 1733 Z-score: 1927.8 bits: 365.3 E(): 9.8e-99 Smith-Waterman score: 1733; 86.513% identity (93.421% similar) in 304 aa overlap (109-412:18-321) 80 90 100 110 120 130 pj0263 TPVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLKTYNCYHEGKSFQLRHREE :...::::.:::::::::::.::::::::: gi|194 MKEDCPPSSHVPISDSKSILKSELLSLLKTYNCYHEGRSFQLRHREE 10 20 30 40 140 150 160 170 180 190 pj0263 EGTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGRPSCPLKEPSPQNGNITAQ ::.:::::::::.::::::::::.:::::.::: :.:: ::: : ::: :.:..::: gi|194 EGALIIEGLLNISWGLRRPIRLQIQDDRERVHLSSASWTPGRSSFHPKEPPLQDGKVTAQ 50 60 70 80 90 100 200 210 220 230 240 250 pj0263 GPSIQPVHKAESSTDSSGPLEEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF :: : : ::: :.: :::: ::.::::::::::.:. ::::.::::::::::::::: gi|194 EPSTQAEHTEESSKDGSEPLEEDEETPQLMRTKSDAACVIQRRPRCRAPGEAQRIRRHRF 110 120 130 140 150 160 260 270 280 290 300 310 pj0263 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES ::::::::::::::::::::.:::::::::::::::::::::::::.::::::::::::: gi|194 SINGHFYNHKTSVFTPAYGSMTNVRVNSTMTTLQVLTLLLNKFRVENGPSEFALYIVHES 170 180 190 200 210 220 320 330 340 350 360 370 pj0263 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK :::::::: ::::::::::::::::::::::::::: ::::.:::::::::::::::::: gi|194 GERTKLKDSEYPLISRILHGPCEKIARIFLMEADLGEEVPHDVAQYIKFEMPVLDSFVEK 230 240 250 260 270 280 380 390 400 410 pj0263 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK :::::::::::::::::::::::::::::::::: gi|194 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK 290 300 310 320 >>gi|81888034|sp|Q566C5|RASF4_RAT Ras association domain (322 aa) initn: 1152 init1: 1152 opt: 1686 Z-score: 1875.6 bits: 355.6 E(): 7.9e-96 Smith-Waterman score: 1686; 84.539% identity (93.421% similar) in 304 aa overlap (110-412:19-322) 80 90 100 110 120 130 pj0263 PVTNEETEAREAKGQKLRPCHTLGVHVCLSLFRSELLGLLKTYNCYHEGKSFQLRHREEE ...::::.:::::::::::.:::::::::: gi|818 MKEDCSPSSHVPISDSKFILKSELLSLLKTYNCYHEGRSFQLRHREEE 10 20 30 40 140 150 160 170 180 190 pj0263 GTLIIEGLLNIAWGLRRPIRLQMQDDREQVHLPSTSWMPGRPSCPLKEPSPQNGNITAQG ::::::::::::::::::::::::::::.:::::..:.: : : :. :::.... :. gi|818 GTLIIEGLLNIAWGLRRPIRLQMQDDRERVHLPSATWVPERLSYLQKDASPQDSKVPAEE 50 60 70 80 90 100 200 210 220 230 240 250 pj0263 PSIQPVHKAESSTDSSGPL-EEAEEAPQLMRTKSDASCMSQRRPKCRAPGEAQRIRRHRF :: ::..:.: : :.:::: :: ::.::::::::::::. ::: : :::::::.:::::: gi|818 PSTQPANKGEVSRDGSGPLQEEEEEVPQLMRTKSDASCIIQRRCKSRAPGEAQKIRRHRF 110 120 130 140 150 160 260 270 280 290 300 310 pj0263 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTLQVLTLLLNKFRVEDGPSEFALYIVHES :::::::::::::::::::::::::::::::: :::::::::::::::::::::: :::: gi|818 SINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTQQVLTLLLNKFRVEDGPSEFALYTVHES 170 180 190 200 210 220 320 330 340 350 360 370 pj0263 GERTKLKDCEYPLISRILHGPCEKIARIFLMEADLGVEVPHEVAQYIKFEMPVLDSFVEK ::.::::::::::::::::::::::..::::::::. ::::.:::::::::::::::::: gi|818 GEQTKLKDCEYPLISRILHGPCEKIVKIFLMEADLSEEVPHDVAQYIKFEMPVLDSFVEK 230 240 250 260 270 280 380 390 400 410 pj0263 LKEEEEREIIKLTMKFQALRLTMLQRLEQLVEAK ::::::::::::::::::::::: :::::::::: gi|818 LKEEEEREIIKLTMKFQALRLTMQQRLEQLVEAK 290 300 310 320 412 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 13 15:28:56 2008 done: Wed Aug 13 15:31:22 2008 Total Scan time: 821.290 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]