hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-16065871/chunk_1/iprscan-20080813-16065871.nocrc
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Query sequence: sh01672
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR00863 P2X: cation transporter protein                471.7     3e-139   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR00863   1/1     133   388 ..     1   377 []   471.7   3e-139

Alignments of top-scoring domains:
TIGR00863: domain 1 of 1, from 133 to 388: score 471.7, E = 3e-139
                   *->MAqrlakglssflFdYkTpKyVlvRNkkVGliyRlvQLlILvYvvgW
                       ++   + ++                                     
     sh01672   133    PGR--ERLFC------------------------------------- 140  

                   VFlveKGYQ.esDtslqSSViTKvKGvavTqtseLgnRvWDVADYViPpq
                         G Q++ D                                     
     sh01672   141 ------GHQpDCD------------------------------------- 147  

                   GenVFfiiTnfiVTpnQtQGtCPEspsvpdaiCssDsDCtaGeadtagnG
                                 pnQ+Q  C+E++++pd++Cs+DsDC+aGea+tagnG
     sh01672   148 --------------PNQRQNVCAENEGIPDGACSKDSDCHAGEAVTAGNG 183  

                   ikTGrCVpYfngtvrGTCEIfaWCPVEvdtkvptppLLkeAeNFTlFIKN
                   +kTGrC++ +++ +rGTCEIfaWCP+E+++ +p++p+LkeAe+FT+FIKN
     sh01672   184 VKTGRCLR-RENLARGTCEIFAWCPLETSS-RPEEPFLKEAEDFTIFIKN 231  

                   sIrFPKFnFSKrNilenvdatYlKtClFdpksdPyCPIFRLGdiVekAGq
                   +IrFPKFnFSK+N+++++d+++lK+C+F+pk ++yCPIFRLG+++++AG+
     sh01672   232 HIRFPKFNFSKSNVMDVKDRSFLKSCHFGPK-NHYCPIFRLGSVIRWAGS 280  

                   dFqdLAlkGGVvGItInWdCDLDkaaSeCnPkYsFrRLDnkdkeksvSpG
                   dFqd+Al+GGV+GI+I+W+CDLDkaaSeC+P+YsF+RLDnk ++ksvS+G
     sh01672   281 DFQDIALEGGVIGINIEWNCDLDKAASECHPHYSFSRLDNK-LSKSVSSG 329  

                   YNFRFAkYYrdnaGvEtRtLlKaYGIRFDvlVtGkAGKFdiIPTiIniGs
                   YNFRFA+YYrd+aGvE+RtL+KaYGIRFDv+V+   GK            
     sh01672   330 YNFRFARYYRDAAGVEFRTLMKAYGIRFDVMVN---GK------------ 364  

                   GlallGVgTvLCDliLLyflkKrefYrdKKF<-*
                          g+++CDl+L+y++kKrefYrdKK+   
     sh01672   365 -------GAFFCDLVLIYLIKKREFYRDKKY    388  

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