hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-16250508/chunk_1/iprscan-20080813-16250508.nocrc
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Query sequence: sh02236
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00184                                                  25.2     0.0092   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1      46    86 ..     1    23 []    25.2   0.0092

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 46 to 86: score 25.2, E = 0.0092
                   *->CpICle......pvvlp.CgH.FCr.Ci.........CPlC<-*
                      CpICl+   ++++ + ++C+H FC +Ci ++ ++  +CP+    
     sh02236    46    CPICLNcllekeVGFPEsCNHvFCMtCIlkwaetlasCPID    86   

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