hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-17365614/chunk_1/iprscan-20080813-17365614.nocrc
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Query sequence: sh03965
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00609.10.fs Diacylglycerol kinase accessory domain         104.3    2.9e-29   1
PF00609.10.ls Diacylglycerol kinase accessory domain          55.5    1.6e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00609.10.ls   1/1       3   121 ..     1   190 []    55.5  1.6e-13
PF00609.10.fs   1/1       8   121 ..    45   190 .]   104.3  2.9e-29

Alignments of top-scoring domains:
PF00609.10.ls: domain 1 of 1, from 3 to 121: score 55.5, E = 1.6e-13
                   *->iINNYFSiGVDAsialrFHimREknPekFnSRmkNKlwYfefGtset
                                                             ++ + s++
     sh03965     3    ---------------------------------------LRRAFSDF 10   

                   lastcknLhesvelecdGqevdLsnrDaslEGIiiLNIPSygGGsnLWGe
                   l+ ++k+L+++++++cdG +++ + +D+  + +++LNIP y  G+ +WG 
     sh03965    11 LMGSSKDLAKHIRVVCDGMDLTPKIQDLKPQCVVFLNIPRYCAGTMPWGH 60   

                   skksrgrirefkksitdpkdlktavqdidDgLlEVVGlegamhmgqiyts
                      +                  ++ q++dDg lEV+G +    ++ +   
     sh03965    61 ---P-------------GEHHDFEPQRHDDGYLEVIGFT-MTSLAAL--- 90   

                   iqlglasWvkLmkGrRlaQCsevRlkDiiktektlPMQVDGEP<-*
                    q+g +       G Rl QC+ev    ++ t+k++P+QVDGEP   
     sh03965    91 -QVGGH-------GERLTQCREV----VLTTSKAIPVQVDGEP    121  

PF00609.10.fs: domain 1 of 1, from 8 to 121: score 104.3, E = 2.9e-29
                   *->setlastcknLhesvelecdGqevdLsnrDaslEGIiiLNIPSygGG
                      s++l+ ++k+L+++++++cdG +++ + +D+  + +++LNIP y  G
     sh03965     8    SDFLMGSSKDLAKHIRVVCDGMDLTPKIQDLKPQCVVFLNIPRYCAG 54   

                   snLWGeskksrgrirefkksitdpkdlktavqdidDgLlEVVGlegamhm
                   + +WG    +                  ++ q++dDg lEV+G +    +
     sh03965    55 TMPWGH---P-------------GEHHDFEPQRHDDGYLEVIGFT-MTSL 87   

                   gqiytsiqlglasWvkLmkGrRlaQCsevRlkDiiktektlPMQVDGEP<
                   + +    q+g +       G Rl QC+ev    ++ t+k++P+QVDGEP 
     sh03965    88 AAL----QVGGH-------GERLTQCREV----VLTTSKAIPVQVDGEP  121  

                   -*
                     
     sh03965     -    -    

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