# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Osh04406.fasta.nr -Q sh04406.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 sh04406, 490 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8984055 sequences Expectation_n fit: rho(ln(x))= 5.0990+/-0.000186; mu= 11.9669+/- 0.010 mean_var=68.7071+/-13.568, 0's: 51 Z-trim: 66 B-trim: 1552 in 1/64 Lambda= 0.154730 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|34364659|emb|CAE45783.1| hypothetical protein [ ( 485) 3384 764.4 0 gi|109109238|ref|XP_001113071.1| PREDICTED: v-ets ( 485) 3236 731.3 1.5e-208 gi|119650|sp|P15062.1|ETS1B_CHICK RecName: Full=Tr ( 485) 3001 678.9 9.2e-193 gi|211464|gb|AAA48668.1| c-ets protein ( 491) 2986 675.5 9.5e-192 gi|224083559|ref|XP_002196766.1| PREDICTED: simila ( 484) 2956 668.8 9.7e-190 gi|127587|sp|P01105.1|MYBE_AVILE RecName: Full=p13 ( 669) 2911 658.9 1.3e-186 gi|119641|sp|P14921.1|ETS1_HUMAN RecName: Full=Pro ( 441) 2861 647.6 2.2e-183 gi|60830555|gb|AAX36934.1| v-ets erythroblastosis ( 442) 2861 647.6 2.2e-183 gi|60654163|gb|AAX29774.1| v-ets erythroblastosis ( 442) 2861 647.6 2.2e-183 gi|54695776|gb|AAV38260.1| v-ets erythroblastosis ( 441) 2855 646.3 5.5e-183 gi|73954495|ref|XP_546405.2| PREDICTED: similar to ( 441) 2845 644.0 2.6e-182 gi|49457502|emb|CAG47050.1| ETS1 [Homo sapiens] ( 441) 2843 643.6 3.5e-182 gi|158257112|dbj|BAF84529.1| unnamed protein produ ( 441) 2839 642.7 6.6e-182 gi|149716673|ref|XP_001505149.1| PREDICTED: simila ( 441) 2838 642.5 7.7e-182 gi|45505311|gb|AAS67030.1| C-ets-1 [Oryctolagus cu ( 441) 2837 642.2 9e-182 gi|729454|sp|P41156.1|ETS1_RAT RecName: Full=Prote ( 441) 2834 641.6 1.4e-181 gi|148744010|gb|AAI42108.1| ETS1 protein [Bos taur ( 441) 2818 638.0 1.7e-180 gi|729453|sp|P27577.2|ETS1_MOUSE RecName: Full=Pro ( 440) 2788 631.3 1.8e-178 gi|211753|gb|AAA48764.1| p54 protein [Gallus gallu ( 441) 2776 628.6 1.1e-177 gi|26345232|dbj|BAC36266.1| unnamed protein produc ( 440) 2775 628.4 1.3e-177 gi|193192|gb|AAA63299.1| EGF receptor-related prot ( 440) 2772 627.7 2.1e-177 gi|126327297|ref|XP_001365612.1| PREDICTED: hypoth ( 442) 2772 627.7 2.1e-177 gi|119648|sp|P13474.1|ETS1A_CHICK RecName: Full=Tr ( 441) 2769 627.1 3.3e-177 gi|109109240|ref|XP_001113198.1| PREDICTED: v-ets ( 441) 2737 619.9 4.7e-175 gi|109109236|ref|XP_001113164.1| PREDICTED: v-ets ( 442) 2731 618.6 1.2e-174 gi|296023|emb|CAA39310.1| c-ets-1 [Mus musculus] ( 440) 2667 604.3 2.4e-170 gi|15341828|gb|AAH13089.1| Ets1 protein [Mus muscu ( 393) 2653 601.1 1.9e-169 gi|49522916|gb|AAH75161.1| C-ets-1b protein [Xenop ( 439) 2641 598.5 1.3e-168 gi|228399|prf||1803503A protooncogene c-ets1 ( 440) 2632 596.5 5.3e-168 gi|120538043|gb|AAI29730.1| Ets1a-a protein [Xenop ( 438) 2625 594.9 1.6e-167 gi|189442024|gb|AAI67685.1| LOC100170599 protein [ ( 438) 2625 594.9 1.6e-167 gi|119649|sp|P18755.1|ETS1A_XENLA RecName: Full=Pr ( 438) 2619 593.6 4e-167 gi|47214786|emb|CAG00958.1| unnamed protein produc ( 433) 2474 561.2 2.2e-157 gi|194376362|dbj|BAG62940.1| unnamed protein produ ( 300) 1884 429.4 7.2e-118 gi|517228|emb|CAA46285.1| XE1-a [Xenopus laevis] ( 268) 1711 390.7 2.8e-106 gi|119651|sp|P18756.1|ETS1B_XENLA RecName: Full=Pr ( 268) 1710 390.5 3.3e-106 gi|62204437|gb|AAH92935.1| V-ets erythroblastosis ( 334) 1678 383.4 5.5e-104 gi|119588114|gb|EAW67710.1| v-ets erythroblastosis ( 371) 1630 372.8 1e-100 gi|16878229|gb|AAH17314.1| ETS1 protein [Homo sapi ( 272) 1614 369.1 9.3e-100 gi|194040901|ref|XP_001928504.1| PREDICTED: simila ( 470) 1539 352.5 1.6e-94 gi|149633801|ref|XP_001508979.1| PREDICTED: hypoth ( 473) 1532 351.0 4.7e-94 gi|119643|sp|P10157.1|ETS2_CHICK RecName: Full=Pro ( 479) 1532 351.0 4.7e-94 gi|149017681|gb|EDL76682.1| v-ets erythroblastosis ( 470) 1524 349.2 1.6e-93 gi|194226249|ref|XP_001916178.1| PREDICTED: simila ( 469) 1521 348.5 2.5e-93 gi|147642427|sp|A1A4L6.1|ETS2_BOVIN RecName: Full= ( 470) 1521 348.5 2.6e-93 gi|3046688|gb|AAC39261.1| transcription factor Ets ( 426) 1519 348.0 3.2e-93 gi|55732114|emb|CAH92763.1| hypothetical protein [ ( 469) 1517 347.6 4.7e-93 gi|119645|sp|P15036.1|ETS2_HUMAN RecName: Full=Pro ( 469) 1513 346.7 8.8e-93 gi|30585071|gb|AAP36808.1| Homo sapiens v-ets eryt ( 470) 1513 346.7 8.8e-93 gi|60829032|gb|AAX36862.1| v-ets erythroblastosis ( 470) 1513 346.7 8.8e-93 >>gi|34364659|emb|CAE45783.1| hypothetical protein [Homo (485 aa) initn: 3384 init1: 3384 opt: 3384 Z-score: 4080.1 bits: 764.4 E(): 0 Smith-Waterman score: 3384; 100.000% identity (100.000% similar) in 485 aa overlap (6-490:1-485) 10 20 30 40 50 60 sh0440 GAESRMSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPFWD ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 MSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPFWD 10 20 30 40 50 70 80 90 100 110 120 sh0440 EMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 EMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQ 60 70 80 90 100 110 130 140 150 160 170 180 sh0440 WTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 WTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEI 120 130 140 150 160 170 190 200 210 220 230 240 sh0440 LQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 LQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPI 180 190 200 210 220 230 250 260 270 280 290 300 sh0440 SSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 SSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDS 240 250 260 270 280 290 310 320 330 340 350 360 sh0440 FESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 FESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDR 300 310 320 330 340 350 370 380 390 400 410 420 sh0440 ADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 ADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEV 360 370 380 390 400 410 430 440 450 460 470 480 sh0440 ARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 ARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHA 420 430 440 450 460 470 490 sh0440 MLDVKPDADE :::::::::: gi|343 MLDVKPDADE 480 >>gi|109109238|ref|XP_001113071.1| PREDICTED: v-ets eryt (485 aa) initn: 3236 init1: 3236 opt: 3236 Z-score: 3901.5 bits: 731.3 E(): 1.5e-208 Smith-Waterman score: 3236; 95.670% identity (97.526% similar) in 485 aa overlap (6-490:1-485) 10 20 30 40 50 60 sh0440 GAESRMSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPFWD ::::::::::::::::: ::::::::::::::::::.:::::.:::::::::::: gi|109 MSYFVDSAGSSPVPYSAARPAVVRQGPSNTYEDPRMTCGFQSSYHQQRPCYPFWD 10 20 30 40 50 70 80 90 100 110 120 sh0440 EMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQ 60 70 80 90 100 110 130 140 150 160 170 180 sh0440 WTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 WTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEI 120 130 140 150 160 170 190 200 210 220 230 240 sh0440 LQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPI ::: :: ... .: .: .:::::::::::::::::::::::::::::::::::: gi|109 LQKGKYKPIALSNPGPPFPXXXXXSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPI 180 190 200 210 220 230 250 260 270 280 290 300 sh0440 SSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDS :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|109 SSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRASRGKLGGQDS 240 250 260 270 280 290 310 320 330 340 350 360 sh0440 FESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDR 300 310 320 330 340 350 370 380 390 400 410 420 sh0440 ADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEV 360 370 380 390 400 410 430 440 450 460 470 480 sh0440 ARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHA 420 430 440 450 460 470 490 sh0440 MLDVKPDADE :::::::::: gi|109 MLDVKPDADE 480 >>gi|119650|sp|P15062.1|ETS1B_CHICK RecName: Full=Transf (485 aa) initn: 2948 init1: 2948 opt: 3001 Z-score: 3618.0 bits: 678.9 E(): 9.2e-193 Smith-Waterman score: 3001; 89.691% identity (94.433% similar) in 485 aa overlap (6-490:2-485) 10 20 30 40 50 60 sh0440 GAESRMSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPFWD :::..:.. .: :: ::.:. :: :. ::: : : .:: : : : :: gi|119 MMSYYMDTTIGSTGPYPLARPGVM-QGASSCCEDPWMPCRLQSACCPPRSCCPPWD 10 20 30 40 50 70 80 90 100 110 120 sh0440 EMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQ : : ::::::::: .:::::::::::::::::::::::::::::.::::::::::::.: gi|119 EAAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQ 60 70 80 90 100 110 130 140 150 160 170 180 sh0440 WTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEI :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|119 WTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEI 120 130 140 150 160 170 190 200 210 220 230 240 sh0440 LQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPI ::::..::: .:::: :::::::::::::::::::::::::::::::::::::::::::: gi|119 LQKEEAKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPI 180 190 200 210 220 230 250 260 270 280 290 300 sh0440 SSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDS ::::::::::::::::::::::.:::.::.:::.:::::::::::::::.:::::::::: gi|119 SSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDS 240 250 260 270 280 290 310 320 330 340 350 360 sh0440 FESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDR :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|119 FESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDR 300 310 320 330 340 350 370 380 390 400 410 420 sh0440 ADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEV ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEV 360 370 380 390 400 410 430 440 450 460 470 480 sh0440 ARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHA 420 430 440 450 460 470 490 sh0440 MLDVKPDADE :::::::::: gi|119 MLDVKPDADE 480 >>gi|211464|gb|AAA48668.1| c-ets protein (491 aa) initn: 2929 init1: 2929 opt: 2986 Z-score: 3599.8 bits: 675.5 E(): 9.5e-192 Smith-Waterman score: 2986; 88.571% identity (93.469% similar) in 490 aa overlap (1-490:3-491) 10 20 30 40 50 sh0440 GAESRMSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPF :. :::..:.. .: :: ::.:. :: :. ::: : : .:: : : : gi|211 SAGTSEMMSYYMDTTIGSTGPYPLARPGVM-QGASSCCEDPWMPCRLQSACCPPRSCCPP 10 20 30 40 50 60 70 80 90 100 110 sh0440 WDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDP ::: : ::::::::: .:::::::::::::::::::::::::::::.:::::::::::: gi|211 WDEAAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDP 60 70 80 90 100 110 120 130 140 150 160 170 sh0440 RQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHL .::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|211 QQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHL 120 130 140 150 160 170 180 190 200 210 220 230 sh0440 EILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLH ::::::..::: .:::: :::::::::::::::::::::::::::: : ::::::::::: gi|211 EILQKEEAKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFCERSFITESYQTLH 180 190 200 210 220 230 240 250 260 270 280 290 sh0440 PISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQ ::::::::::::::::::::::::.:::.::.:::.:::::::::::::::.:::::::: gi|211 PISSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQ 240 250 260 270 280 290 300 310 320 330 340 350 sh0440 DSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVR :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|211 DSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVR 300 310 320 330 340 350 360 370 380 390 400 410 sh0440 DRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPD ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 DRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPD 360 370 380 390 400 410 420 430 440 450 460 470 sh0440 EVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|211 EVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEEL 420 430 440 450 460 470 480 490 sh0440 HAMLDVKPDADE :::::::::::: gi|211 HAMLDVKPDADE 480 490 >>gi|224083559|ref|XP_002196766.1| PREDICTED: similar to (484 aa) initn: 2945 init1: 1511 opt: 2956 Z-score: 3563.7 bits: 668.8 E(): 9.7e-190 Smith-Waterman score: 2956; 87.835% identity (94.845% similar) in 485 aa overlap (6-490:2-484) 10 20 30 40 50 60 sh0440 GAESRMSYFVDSAGSSPVPYSAPRPAVVRQGPSNTYEDPRMNCGFQSNYHQQRPCYPFWD :::..:.. .. .:: :.:. :. ::: .::::.. : ::: :.:: gi|224 MMSYYMDTTIGNAAPYPLAWPGVMPGLPGPC-EDPWGTCGFQASCCQPRPCCPLWD 10 20 30 40 50 70 80 90 100 110 120 sh0440 EMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFTKEQQRLGIPKDPRQ : :::::::::::: .:::::::::::::::::::::::::::::.::::::::::::.: gi|224 EPATQEVPTGLEHCGTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQ 60 70 80 90 100 110 130 140 150 160 170 180 sh0440 WTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELAPDFVGDILWEHLEI :::::::::::::::::::: ::::::::::::::::::.:::::::::::::::::::: gi|224 WTETHVRDWVMWAVNEFSLKEVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEI 120 130 140 150 160 170 190 200 210 220 230 240 sh0440 LQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPI ::::.:::: .:::: .::::::::::::::::::::::::::::::::::::::::::: gi|224 LQKEEVKPYPANGVNTTYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPI 180 190 200 210 220 230 250 260 270 280 290 300 sh0440 SSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMCMGRTSRGKLGGQDS :::::::::::.:::.:.::.: : :.::.:.:.:::::::::::::::.:::::::::: gi|224 SSEELLSLKYESDYPAVLLREPPQ-DALQSDFFSIKQEVVTPDNMCMGRASRGKLGGQDS 240 250 260 270 280 290 310 320 330 340 350 360 sh0440 FESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDR :::::::::::::::::::::::.::::::::::::::::::.::.:::::::::::::: gi|224 FESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPATLPSHKPKGTFKDYVRDR 300 310 320 330 340 350 370 380 390 400 410 420 sh0440 ADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEV ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|224 ADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEV 360 370 380 390 400 410 430 440 450 460 470 480 sh0440 ARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|224 ARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHA 420 430 440 450 460 470 490 sh0440 MLDVKPDADE :::::::::: gi|224 MLDVKPDADE 480 >>gi|127587|sp|P01105.1|MYBE_AVILE RecName: Full=p135Gag (669 aa) initn: 2854 init1: 2854 opt: 2911 Z-score: 3507.4 bits: 658.9 E(): 1.3e-186 Smith-Waterman score: 2911; 88.260% identity (93.711% similar) in 477 aa overlap (1-477:178-653) 10 20 30 sh0440 GAESRMSYFVDSAGSSPVPYSAPRPAVVRQ :. :::..:.. .: :: ::.:. : gi|127 ADNTMTSGDNAPVSCLGEHHHCTPSPPVDHGTSEMMSYYMDTTIGSTGPYPLARPGVM-Q 150 160 170 180 190 200 40 50 60 70 80 90 sh0440 GPSNTYEDPRMNCGFQSNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSS : :. ::: : : .:: : : : ::: : ::::::::: .:::::::::::::: gi|127 GASSCCEDPWMPCRLQSACCPPRSCCPPWDEAAIQEVPTGLEHYSTDMECADVPLLTPSS 210 220 230 240 250 260 100 110 120 130 140 150 sh0440 KEMMSQALKATFSGFTKEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMN :::::::::::::::.::::::::::::.::::::::::::::::::::::::::::::: gi|127 KEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMN 270 280 290 300 310 320 160 170 180 190 200 210 sh0440 GAALCALGKDCFLELAPDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFIS :::::::::.::::::::::::::::::::::::..::: .:::: :::::::::::::: gi|127 GAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNAAYPESRYTSDYFIS 330 340 350 360 370 380 220 230 240 250 260 270 sh0440 YGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQN ::::::::::::::::::::::::::::::::::::::::::::::::::::.:::.::. gi|127 YGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTDSLQT 390 400 410 420 430 440 280 290 300 310 320 330 sh0440 DYFAIKQEVVTPDNMCMGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVP :::.:::::::::::::::.:::::::::::::::::::::::::::::::::.:::::: gi|127 DYFTIKQEVVTPDNMCMGRVSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVP 450 460 470 480 490 500 340 350 360 370 380 390 sh0440 SYDSFDSEDYPAALPNHKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFL ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|127 SYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFL 510 520 530 540 550 560 400 410 420 430 440 450 sh0440 LELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNI :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::. gi|127 LELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMDYEKLSRGLRYYYDKNV 570 580 590 600 610 620 460 470 480 490 sh0440 IHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE ::::::::::::::::::::::::::: gi|127 IHKTAGKRYVYRFVCDLQSLLGYTPEEHSSASGLTSSMACSSF 630 640 650 660 >>gi|119641|sp|P14921.1|ETS1_HUMAN RecName: Full=Protein (441 aa) initn: 2861 init1: 2861 opt: 2861 Z-score: 3449.7 bits: 647.6 E(): 2.2e-183 Smith-Waterman score: 2861; 100.000% identity (100.000% similar) in 414 aa overlap (77-490:28-441) 50 60 70 80 90 100 sh0440 SNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFT :::::::::::::::::::::::::::::: gi|119 MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFT 10 20 30 40 50 110 120 130 140 150 160 sh0440 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA 60 70 80 90 100 110 170 180 190 200 210 220 sh0440 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE 120 130 140 150 160 170 230 240 250 260 270 280 sh0440 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC 180 190 200 210 220 230 290 300 310 320 330 340 sh0440 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN 240 250 260 270 280 290 350 360 370 380 390 400 sh0440 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT 300 310 320 330 340 350 410 420 430 440 450 460 sh0440 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD 360 370 380 390 400 410 470 480 490 sh0440 LQSLLGYTPEELHAMLDVKPDADE :::::::::::::::::::::::: gi|119 LQSLLGYTPEELHAMLDVKPDADE 420 430 440 >>gi|60830555|gb|AAX36934.1| v-ets erythroblastosis viru (442 aa) initn: 2861 init1: 2861 opt: 2861 Z-score: 3449.7 bits: 647.6 E(): 2.2e-183 Smith-Waterman score: 2861; 100.000% identity (100.000% similar) in 414 aa overlap (77-490:28-441) 50 60 70 80 90 100 sh0440 SNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFT :::::::::::::::::::::::::::::: gi|608 MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFT 10 20 30 40 50 110 120 130 140 150 160 sh0440 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA 60 70 80 90 100 110 170 180 190 200 210 220 sh0440 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE 120 130 140 150 160 170 230 240 250 260 270 280 sh0440 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC 180 190 200 210 220 230 290 300 310 320 330 340 sh0440 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN 240 250 260 270 280 290 350 360 370 380 390 400 sh0440 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT 300 310 320 330 340 350 410 420 430 440 450 460 sh0440 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD 360 370 380 390 400 410 470 480 490 sh0440 LQSLLGYTPEELHAMLDVKPDADE :::::::::::::::::::::::: gi|608 LQSLLGYTPEELHAMLDVKPDADED 420 430 440 >>gi|60654163|gb|AAX29774.1| v-ets erythroblastosis viru (442 aa) initn: 2861 init1: 2861 opt: 2861 Z-score: 3449.7 bits: 647.6 E(): 2.2e-183 Smith-Waterman score: 2861; 100.000% identity (100.000% similar) in 414 aa overlap (77-490:28-441) 50 60 70 80 90 100 sh0440 SNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFT :::::::::::::::::::::::::::::: gi|606 MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFT 10 20 30 40 50 110 120 130 140 150 160 sh0440 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA 60 70 80 90 100 110 170 180 190 200 210 220 sh0440 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE 120 130 140 150 160 170 230 240 250 260 270 280 sh0440 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC 180 190 200 210 220 230 290 300 310 320 330 340 sh0440 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN 240 250 260 270 280 290 350 360 370 380 390 400 sh0440 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT 300 310 320 330 340 350 410 420 430 440 450 460 sh0440 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD 360 370 380 390 400 410 470 480 490 sh0440 LQSLLGYTPEELHAMLDVKPDADE :::::::::::::::::::::::: gi|606 LQSLLGYTPEELHAMLDVKPDADEL 420 430 440 >>gi|54695776|gb|AAV38260.1| v-ets erythroblastosis viru (441 aa) initn: 2855 init1: 2855 opt: 2855 Z-score: 3442.4 bits: 646.3 E(): 5.5e-183 Smith-Waterman score: 2855; 99.758% identity (99.758% similar) in 414 aa overlap (77-490:28-441) 50 60 70 80 90 100 sh0440 SNYHQQRPCYPFWDEMATQEVPTGLEHCVSDMECADVPLLTPSSKEMMSQALKATFSGFT :::::::::::::::::::::::::::::: gi|546 MKAAVDLKPTLTIIKTEKVDLELFPSPDMECADVPLLTPSSKEMMSQALKATFSGFT 10 20 30 40 50 110 120 130 140 150 160 sh0440 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 KEQQRLGIPKDPRQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKDCFLELA 60 70 80 90 100 110 170 180 190 200 210 220 sh0440 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 PDFVGDILWEHLEILQKEDVKPYQVNGVNPAYPESRYTSDYFISYGIEHAQCVPPSEFSE 120 130 140 150 160 170 230 240 250 260 270 280 sh0440 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVVTPDNMC ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|546 PSFITESYQTLHPISSEELLSLKYENDYPSVILRDPLQTDTLQNDYFAIKQEVFTPDNMC 180 190 200 210 220 230 290 300 310 320 330 340 sh0440 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 MGRTSRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFNSLQRVPSYDSFDSEDYPAALPN 240 250 260 270 280 290 350 360 370 380 390 400 sh0440 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 HKPKGTFKDYVRDRADLNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWT 300 310 320 330 340 350 410 420 430 440 450 460 sh0440 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 GDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCD 360 370 380 390 400 410 470 480 490 sh0440 LQSLLGYTPEELHAMLDVKPDADE :::::::::::::::::::::::: gi|546 LQSLLGYTPEELHAMLDVKPDADE 420 430 440 490 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 18:03:20 2009 done: Thu Jun 18 18:06:25 2009 Total Scan time: 1131.640 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]