hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-16442899/chunk_1/iprscan-20090618-16442899.nocrc
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Query sequence: sj01179
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00315                                                 196.4    2.7e-54   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00315    1/1     421   537 ..     1   121 []   196.4  2.7e-54

Alignments of top-scoring domains:
SM00315: domain 1 of 1, from 421 to 537: score 196.4, E = 2.7e-54
                   *->sleklLendpiGrllFreFLksefseykenleFWlaveefkkaed.e
                      sleklL  +++G+++F+ FL++efse  enleFWla+e+fkk ++++
     sj01179   421    SLEKLL-VHKYGLAVFQAFLRTEFSE--ENLEFWLACEDFKKVKSqS 464  

                   ersskAreIydkylspeapkesevnldsdtreeieenleepppdlFdeAq
                   ++ skA++I+ +y++ +a k  evnlds+tre++++nl+++++++Fd Aq
     sj01179   465 KMASKAKKIFAEYIAIQACK--EVNLDSYTREHTKDNLQSVTRGCFDLAQ 512  

                   revyellekdsyprFLkSdyYlrfL<-*
                   ++++ l+ekdsyprFL+Sd+Yl++    
     sj01179   513 KRIFGLMEKDSYPRFLRSDLYLDLI    537  

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