# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Osj01773.fasta.nr -Q sj01773.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 sj01773, 218 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6841382 sequences Expectation_n fit: rho(ln(x))= 4.7383+/-0.000183; mu= 10.3032+/- 0.010 mean_var=64.9959+/-12.557, 0's: 34 Z-trim: 39 B-trim: 234 in 2/63 Lambda= 0.159086 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088736|dbj|BAD92815.1| C21orf2 protein varian ( 218) 1470 345.5 3.1e-93 gi|119629838|gb|EAX09433.1| chromosome 21 open rea ( 255) 887 211.8 6.7e-53 gi|3334131|sp|O43822|CU002_HUMAN Uncharacterized p ( 256) 887 211.8 6.7e-53 gi|21411470|gb|AAH31300.1| C21orf2 protein [Homo s ( 375) 887 211.9 9e-53 gi|119629836|gb|EAX09431.1| chromosome 21 open rea ( 218) 883 210.8 1.1e-52 gi|2425155|emb|CAB07532.1| c21ORF-HumF09G8.5 [Homo ( 256) 881 210.4 1.8e-52 gi|1835525|gb|AAB46590.1| Polypeptide encoded by h ( 255) 878 209.7 2.8e-52 gi|114684667|ref|XP_514938.2| PREDICTED: hypotheti ( 256) 871 208.1 8.6e-52 gi|114684669|ref|XP_001151422.1| PREDICTED: simila ( 376) 871 208.2 1.1e-51 gi|1835527|gb|AAB46591.1| Polypeptide encoded by h ( 214) 862 206.0 3.1e-51 gi|114684671|ref|XP_001151289.1| PREDICTED: simila ( 214) 857 204.8 7e-51 gi|109065166|ref|XP_001118354.1| PREDICTED: simila ( 217) 848 202.8 2.9e-50 gi|74001537|ref|XP_854187.1| PREDICTED: similar to ( 269) 664 160.6 1.8e-37 gi|149742100|ref|XP_001490431.1| PREDICTED: simila ( 256) 657 159.0 5.2e-37 gi|74139982|dbj|BAE31826.1| unnamed protein produc ( 212) 646 156.4 2.6e-36 gi|148699817|gb|EDL31764.1| RIKEN cDNA 1810043G02, ( 217) 646 156.4 2.7e-36 gi|26344628|dbj|BAC35963.1| unnamed protein produc ( 249) 646 156.5 3e-36 gi|148699819|gb|EDL31766.1| RIKEN cDNA 1810043G02, ( 271) 646 156.5 3.1e-36 gi|12835048|dbj|BAB23134.1| unnamed protein produc ( 305) 646 156.5 3.4e-36 gi|16307566|gb|AAH10330.1| 1810043G02Rik protein [ ( 249) 644 156.0 4.1e-36 gi|55715696|gb|AAH85944.1| Similar to RIKEN cDNA 1 ( 249) 636 154.2 1.5e-35 gi|109658261|gb|AAI18256.1| Chromosome 21 open rea ( 256) 635 153.9 1.7e-35 gi|149043618|gb|EDL97069.1| similar to RIKEN cDNA ( 353) 636 154.3 1.9e-35 gi|149411497|ref|XP_001513910.1| PREDICTED: hypoth ( 319) 629 152.6 5.3e-35 gi|53136396|emb|CAG32527.1| hypothetical protein [ ( 254) 550 134.4 1.3e-29 gi|51261669|gb|AAH80050.1| MGC83386 protein [Xenop ( 256) 473 116.8 2.7e-24 gi|38648985|gb|AAH63358.1| Hypothetical protein MG ( 212) 466 115.1 7.1e-24 gi|47228038|emb|CAF97667.1| unnamed protein produc ( 275) 425 105.8 5.9e-21 gi|189525634|ref|XP_001919611.1| PREDICTED: simila ( 233) 400 100.0 2.8e-19 gi|115934900|ref|XP_001189030.1| PREDICTED: simila ( 203) 358 90.3 2e-16 gi|115772457|ref|XP_782159.2| PREDICTED: similar t ( 258) 358 90.4 2.4e-16 gi|194179741|gb|EDW93352.1| GE20650 [Drosophila ya ( 467) 341 86.7 5.6e-15 gi|190653619|gb|EDV50862.1| GG14222 [Drosophila er ( 471) 335 85.3 1.5e-14 gi|190624054|gb|EDV39578.1| GF24405 [Drosophila an ( 479) 332 84.6 2.4e-14 gi|16197873|gb|AAL13598.1| GH13848p [Drosophila me ( 389) 321 82.0 1.2e-13 gi|193898813|gb|EDV97679.1| GH17002 [Drosophila gr ( 469) 320 81.9 1.6e-13 gi|125660076|gb|ABN49266.1| IP14886p [Drosophila m ( 233) 316 80.7 1.8e-13 gi|156225020|gb|EDO45841.1| predicted protein [Nem ( 302) 317 81.0 1.8e-13 gi|23092969|gb|AAN11583.1| CG14995-PD, isoform D [ ( 354) 316 80.8 2.4e-13 gi|194154920|gb|EDW70104.1| GJ13612 [Drosophila vi ( 454) 317 81.2 2.5e-13 gi|23092970|gb|AAN11584.1| CG14995-PC, isoform C [ ( 411) 316 80.9 2.7e-13 gi|7292433|gb|AAF47837.1| CG14995-PA, isoform A [D ( 454) 316 80.9 2.9e-13 gi|194128375|gb|EDW50418.1| GM14015 [Drosophila se ( 455) 313 80.2 4.7e-13 gi|193920764|gb|EDW19631.1| GI11416 [Drosophila mo ( 469) 309 79.3 9.1e-13 gi|194117415|gb|EDW39458.1| GL16756 [Drosophila pe ( 471) 307 78.9 1.3e-12 gi|194164462|gb|EDW79363.1| GK13704 [Drosophila wi ( 475) 306 78.7 1.5e-12 gi|70867590|gb|EAN82705.1| hypothetical protein, c ( 277) 303 77.8 1.6e-12 gi|70871348|gb|EAN85513.1| hypothetical protein, c ( 277) 301 77.3 2.2e-12 gi|66524145|ref|XP_395131.2| PREDICTED: similar to ( 429) 298 76.8 4.9e-12 gi|167881187|gb|EDS44570.1| leucine rich repeat pr ( 435) 298 76.8 5e-12 >>gi|62088736|dbj|BAD92815.1| C21orf2 protein variant [H (218 aa) initn: 1470 init1: 1470 opt: 1470 Z-score: 1828.9 bits: 345.5 E(): 3.1e-93 Smith-Waterman score: 1470; 100.000% identity (100.000% similar) in 218 aa overlap (1-218:1-218) 10 20 30 40 50 60 sj0177 VTQGPQGLRASGRSCVGPFLSHLGRDRTPGVLTELRCVVPARLTALERSRKPRGRGRGRY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VTQGPQGLRASGRSCVGPFLSHLGRDRTPGVLTELRCVVPARLTALERSRKPRGRGRGRY 10 20 30 40 50 60 70 80 90 100 110 120 sj0177 ITLLPVPEADPILERVPQPEFCSCVNSISTLEPVSRCQRLSELYLRRNRIPSLAELFYLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ITLLPVPEADPILERVPQPEFCSCVNSISTLEPVSRCQRLSELYLRRNRIPSLAELFYLK 70 80 90 100 110 120 130 140 150 160 170 180 sj0177 GLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQAVTEEELSRALSEGEEITAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQAVTEEELSRALSEGEEITAA 130 140 150 160 170 180 190 200 210 sj0177 PEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT :::::::::::::::::::::::::::::::::::::: gi|620 PEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT 190 200 210 >>gi|119629838|gb|EAX09433.1| chromosome 21 open reading (255 aa) initn: 883 init1: 883 opt: 887 Z-score: 1104.9 bits: 211.8 E(): 6.7e-53 Smith-Waterman score: 887; 92.568% identity (95.946% similar) in 148 aa overlap (72-218:35-182) 50 60 70 80 90 100 sj0177 RLTALERSRKPRGRGRGRYITLLPVPEADPILERVPQPEFCS-CVNSISTLEPVSRCQRL : ...:. : . :::::::::::::::: gi|119 RKMVLTRAKASELHSVRKLNCWGSRLTDISICQEMPSLEVITLSVNSISTLEPVSRCQRL 10 20 30 40 50 60 110 120 130 140 150 160 sj0177 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ 70 80 90 100 110 120 170 180 190 200 210 sj0177 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEATGA 130 140 150 160 170 180 gi|119 QDERGLKPPSRGQFPSLSARDASSSHRGRNVLTAILLLLRELDAEGLEAVQQTVGSRLQA 190 200 210 220 230 240 >>gi|3334131|sp|O43822|CU002_HUMAN Uncharacterized prote (256 aa) initn: 883 init1: 883 opt: 887 Z-score: 1104.9 bits: 211.8 E(): 6.7e-53 Smith-Waterman score: 887; 92.568% identity (95.946% similar) in 148 aa overlap (72-218:35-182) 50 60 70 80 90 100 sj0177 RLTALERSRKPRGRGRGRYITLLPVPEADPILERVPQPEFCS-CVNSISTLEPVSRCQRL : ...:. : . :::::::::::::::: gi|333 RKMVLTRAKASELHSVRKLNCWGSRLTDISICQEMPSLEVITLSVNSISTLEPVSRCQRL 10 20 30 40 50 60 110 120 130 140 150 160 sj0177 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ 70 80 90 100 110 120 170 180 190 200 210 sj0177 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEATSG 130 140 150 160 170 180 gi|333 AQDERGLKPPSRGQFPSLSARDASSSHRGRNVLTAILLLLRELDAEGLEAVQQTVGSRLQ 190 200 210 220 230 240 >>gi|21411470|gb|AAH31300.1| C21orf2 protein [Homo sapie (375 aa) initn: 883 init1: 883 opt: 887 Z-score: 1102.6 bits: 211.9 E(): 9e-53 Smith-Waterman score: 887; 92.568% identity (95.946% similar) in 148 aa overlap (72-218:35-182) 50 60 70 80 90 100 sj0177 RLTALERSRKPRGRGRGRYITLLPVPEADPILERVPQPEFCS-CVNSISTLEPVSRCQRL : ...:. : . :::::::::::::::: gi|214 RKMVLTRAKASELHSVRKLNCWGSRLTDISICQEMPSLEVITLSVNSISTLEPVSRCQRL 10 20 30 40 50 60 110 120 130 140 150 160 sj0177 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ 70 80 90 100 110 120 170 180 190 200 210 sj0177 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEATGA 130 140 150 160 170 180 gi|214 QDERGLKPPSRGQFPSLSARDASSSHRGRVSGGPLGAAAASAHCTHCTETVGREHGASQG 190 200 210 220 230 240 >>gi|119629836|gb|EAX09431.1| chromosome 21 open reading (218 aa) initn: 883 init1: 883 opt: 883 Z-score: 1100.8 bits: 210.8 E(): 1.1e-52 Smith-Waterman score: 883; 100.000% identity (100.000% similar) in 134 aa overlap (85-218:11-144) 60 70 80 90 100 110 sj0177 RGRGRYITLLPVPEADPILERVPQPEFCSCVNSISTLEPVSRCQRLSELYLRRNRIPSLA :::::::::::::::::::::::::::::: gi|119 MPSLEVITLSVNSISTLEPVSRCQRLSELYLRRNRIPSLA 10 20 30 40 120 130 140 150 160 170 sj0177 ELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQAVTEEELSRALSEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQAVTEEELSRALSEG 50 60 70 80 90 100 180 190 200 210 sj0177 EEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT :::::::::::::::::::::::::::::::::::::::::::: gi|119 EEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEATSGAQDERGLKPPSRGQ 110 120 130 140 150 160 gi|119 FPSLSARDASSSHRGRNVLTAILLLLRELDAEGLEAVQQTVGSRLQALRGEEVQEHAE 170 180 190 200 210 >>gi|2425155|emb|CAB07532.1| c21ORF-HumF09G8.5 [Homo sap (256 aa) initn: 877 init1: 877 opt: 881 Z-score: 1097.4 bits: 210.4 E(): 1.8e-52 Smith-Waterman score: 881; 91.892% identity (95.270% similar) in 148 aa overlap (72-218:35-182) 50 60 70 80 90 100 sj0177 RLTALERSRKPRGRGRGRYITLLPVPEADPILERVPQPEFCS-CVNSISTLEPVSRCQRL : ...:. : . :::::::::::::::: gi|242 RKMVLTRAKASELHSVRKLNCWGSRLTDISICQEMPSLEVITLSVNSISTLEPVSRCQRL 10 20 30 40 50 60 110 120 130 140 150 160 sj0177 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|242 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ 70 80 90 100 110 120 170 180 190 200 210 sj0177 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::: gi|242 AVTEEELSRALSEGEEITAAPEREGIGHGGPKLCCTLSSLSSAAETGRDPLDSEEEATSG 130 140 150 160 170 180 gi|242 AQDERGLKPPSRGQFPSLSARDASSSHRGRNVLTAILLLLRELDAEGLEAVQQTVGSRLQ 190 200 210 220 230 240 >>gi|1835525|gb|AAB46590.1| Polypeptide encoded by human (255 aa) initn: 874 init1: 874 opt: 878 Z-score: 1093.7 bits: 209.7 E(): 2.8e-52 Smith-Waterman score: 878; 91.892% identity (95.270% similar) in 148 aa overlap (72-218:35-182) 50 60 70 80 90 100 sj0177 RLTALERSRKPRGRGRGRYITLLPVPEADPILERVPQPEFCS-CVNSISTLEPVSRCQRL : ...:. : . :::::::::::::::: gi|183 RKMVLTRAKASELHSVRKLNCWGSRLTDISICQEMPSLEVITLSVNSISTLEPVSRCQRL 10 20 30 40 50 60 110 120 130 140 150 160 sj0177 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|183 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHAYRMTVLRTLPRLQKLDNQ 70 80 90 100 110 120 170 180 190 200 210 sj0177 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|183 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEATGA 130 140 150 160 170 180 gi|183 QDERGLKPPSRGQFPSLSARDASSSHRGRNVLTAILLLLRELDAEGLEAVQQTVGSRLQA 190 200 210 220 230 240 >>gi|114684667|ref|XP_514938.2| PREDICTED: hypothetical (256 aa) initn: 869 init1: 869 opt: 871 Z-score: 1085.0 bits: 208.1 E(): 8.6e-52 Smith-Waterman score: 871; 91.892% identity (95.270% similar) in 148 aa overlap (72-218:35-182) 50 60 70 80 90 100 sj0177 RLTALERSRKPRGRGRGRYITLLPVPEADPILERVPQPEFCS-CVNSISTLEPVSRCQRL : ...:. : . :::::::::::::::: gi|114 RKMVLTRAKASELHSVRKLNCWGSRLTDISICREMPSLEVITLSVNSISTLEPVSRCQRL 10 20 30 40 50 60 110 120 130 140 150 160 sj0177 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ 70 80 90 100 110 120 170 180 190 200 210 sj0177 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|114 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDLLDSEEEATSG 130 140 150 160 170 180 gi|114 AQDERGLKPPSRGQFPSLSARDASSSHRGRNILTAILLLLRELDAEGLEAVQQTVGSRLQ 190 200 210 220 230 240 >>gi|114684669|ref|XP_001151422.1| PREDICTED: similar to (376 aa) initn: 869 init1: 869 opt: 871 Z-score: 1082.7 bits: 208.2 E(): 1.1e-51 Smith-Waterman score: 871; 91.892% identity (95.270% similar) in 148 aa overlap (72-218:35-182) 50 60 70 80 90 100 sj0177 RLTALERSRKPRGRGRGRYITLLPVPEADPILERVPQPEFCS-CVNSISTLEPVSRCQRL : ...:. : . :::::::::::::::: gi|114 RKMVLTRAKASELHSVRKLNCWGSRLTDISICREMPSLEVITLSVNSISTLEPVSRCQRL 10 20 30 40 50 60 110 120 130 140 150 160 sj0177 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SELYLRRNRIPSLAELFYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQ 70 80 90 100 110 120 170 180 190 200 210 sj0177 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|114 AVTEEELSRALSEGEEITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDLLDSEEEATGA 130 140 150 160 170 180 gi|114 QDERGLKPPSRGQFPSLSARDASSSHRGRVSGGPLGAAAASAHCTHCTETVGREHGASQG 190 200 210 220 230 240 >>gi|1835527|gb|AAB46591.1| Polypeptide encoded by human (214 aa) initn: 862 init1: 862 opt: 862 Z-score: 1074.9 bits: 206.0 E(): 3.1e-51 Smith-Waterman score: 862; 99.242% identity (99.242% similar) in 132 aa overlap (87-218:10-141) 60 70 80 90 100 110 sj0177 RGRYITLLPVPEADPILERVPQPEFCSCVNSISTLEPVSRCQRLSELYLRRNRIPSLAEL :::::::::::::::::::::::::::::: gi|183 MPSLEVITLSISTLEPVSRCQRLSELYLRRNRIPSLAEL 10 20 30 120 130 140 150 160 170 sj0177 FYLKGLPRLRVLWLAENPCCGTSPHRYRMTVLRTLPRLQKLDNQAVTEEELSRALSEGEE ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|183 FYLKGLPRLRVLWLAENPCCGTSPHAYRMTVLRTLPRLQKLDNQAVTEEELSRALSEGEE 40 50 60 70 80 90 180 190 200 210 sj0177 ITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEAT :::::::::::::::::::::::::::::::::::::::::: gi|183 ITAAPEREGTGHGGPKLCCTLSSLSSAAETGRDPLDSEEEATGAQDERGLKPPSRGQFPS 100 110 120 130 140 150 gi|183 LSARDASSSHRGRNVLTAILLLLRELDAEGLEAVQQTVGSRLQALRGEEVQEHAE 160 170 180 190 200 210 218 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 13 19:25:38 2008 done: Wed Aug 13 19:28:26 2008 Total Scan time: 662.970 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]