# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Osj03130.fasta.nr -Q sj03130.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 sj03130, 854 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6841883 sequences Expectation_n fit: rho(ln(x))= 4.9006+/-0.000183; mu= 14.3374+/- 0.010 mean_var=70.1417+/-13.674, 0's: 39 Z-trim: 46 B-trim: 12 in 2/64 Lambda= 0.153139 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087350|dbj|BAD92122.1| integrin alpha 4 precu ( 854) 5614 1250.2 0 gi|119631390|gb|EAX10985.1| integrin, alpha 4 (ant (1032) 5541 1234.1 0 gi|903744|gb|AAB59613.1| integrin alpha 4 subunit (1038) 5541 1234.1 0 gi|148922407|gb|AAI46278.1| Integrin, alpha 4 (ant (1032) 5535 1232.8 0 gi|124945|sp|P13612.1|ITA4_HUMAN Integrin alpha-4 (1038) 5535 1232.8 0 gi|114582015|ref|XP_525977.2| PREDICTED: integrin (1032) 5527 1231.0 0 gi|109100261|ref|XP_001100929.1| PREDICTED: simila (1032) 5406 1204.3 0 gi|119631391|gb|EAX10986.1| integrin, alpha 4 (ant ( 820) 5389 1200.4 0 gi|194222366|ref|XP_001917636.1| PREDICTED: integr (1034) 5050 1125.6 0 gi|74004929|ref|XP_545551.2| PREDICTED: similar to (1165) 4941 1101.6 0 gi|1173604|gb|AAB09630.1| alpha-4 integrin [Mus mu (1032) 4868 1085.4 0 gi|12862879|dbj|BAB32639.1| integrin alpha-4 subun (1033) 4868 1085.4 0 gi|266394|sp|Q00651.1|ITA4_MOUSE Integrin alpha-4 (1039) 4868 1085.4 0 gi|46329452|gb|AAH68313.1| Integrin alpha 4 [Mus m (1032) 4866 1085.0 0 gi|149022364|gb|EDL79258.1| integrin alpha 4 (mapp (1036) 4807 1071.9 0 gi|126326699|ref|XP_001377736.1| PREDICTED: simila (1031) 4404 982.9 0 gi|149639757|ref|XP_001515892.1| PREDICTED: simila ( 940) 4168 930.7 0 gi|118093520|ref|XP_421974.2| PREDICTED: similar t (1020) 3487 780.3 0 gi|3183042|sp|Q91687|ITA4_XENLA Integrin alpha-4 p (1032) 3273 733.0 1.3e-208 gi|34190805|gb|AAH16671.1| ITGA4 protein [Homo sap ( 617) 2803 629.0 1.6e-177 gi|74224318|dbj|BAE33742.1| unnamed protein produc ( 642) 2692 604.5 4e-170 gi|74217588|dbj|BAE33546.1| unnamed protein produc ( 604) 2477 557.0 7.7e-156 gi|26342106|dbj|BAC34715.1| unnamed protein produc ( 604) 2473 556.1 1.4e-155 gi|148677301|gb|EDL09248.1| integrin alpha 9 [Mus (1029) 2185 492.6 3e-136 gi|15487266|emb|CAC69080.1| integrin alpha 9 prote (1036) 2185 492.6 3e-136 gi|165377045|ref|NP_598482.2| integrin alpha 9 iso (1036) 2185 492.6 3e-136 gi|109484081|ref|XP_001061864.1| PREDICTED: simila (1285) 2180 491.6 7.7e-136 gi|73990158|ref|XP_534221.2| PREDICTED: similar to (1030) 2177 490.9 1e-135 gi|119584905|gb|EAW64501.1| integrin, alpha 9 [Hom (1035) 2174 490.2 1.6e-135 gi|149729781|ref|XP_001489124.1| PREDICTED: integr (1022) 2164 488.0 7.5e-135 gi|400361|gb|AAA16099.1| integrin alpha 9 protein (1000) 2163 487.8 8.6e-135 gi|2833247|sp|Q13797|ITA9_HUMAN Integrin alpha-9 p (1035) 2163 487.8 8.8e-135 gi|119914280|ref|XP_610637.3| PREDICTED: integrin, (1035) 2143 483.4 1.9e-133 gi|109485569|ref|XP_001077270.1| PREDICTED: simila (1282) 2114 477.0 1.9e-131 gi|53127784|emb|CAG31221.1| hypothetical protein [ (1031) 2107 475.4 4.7e-131 gi|114586255|ref|XP_526172.2| PREDICTED: integrin, (1100) 2009 453.8 1.6e-124 gi|51330376|gb|AAH80190.1| ITGA4 protein [Homo sap ( 277) 1828 413.3 6.2e-113 gi|109042248|ref|XP_001086687.1| PREDICTED: simila ( 929) 1568 356.3 3e-95 gi|149018292|gb|EDL76933.1| rCG25760 [Rattus norve ( 905) 1561 354.7 8.7e-95 gi|149260472|ref|XP_001476765.1| PREDICTED: simila ( 959) 1491 339.3 4.1e-90 gi|149576365|ref|XP_001516675.1| PREDICTED: simila ( 663) 1460 332.3 3.6e-88 gi|20987453|gb|AAH30198.1| ITGA9 protein [Homo sap ( 632) 1383 315.3 4.6e-83 gi|194382688|dbj|BAG64514.1| unnamed protein produ ( 366) 1280 292.3 2.1e-76 gi|189520057|ref|XP_001919452.1| PREDICTED: hypoth ( 572) 1247 285.2 4.7e-74 gi|47228962|emb|CAG09477.1| unnamed protein produc (2502) 1240 284.2 4.2e-73 gi|24421069|emb|CAD53328.1| integrin alpha-4 subun ( 174) 1143 261.8 1.6e-67 gi|194381876|dbj|BAG64307.1| unnamed protein produ ( 174) 1129 258.7 1.4e-66 gi|24421065|emb|CAD53326.1| integrin alpha-4 subun ( 167) 1094 250.9 2.8e-64 gi|165928914|gb|ABY74498.1| integrin alpha 1 [Acro (1021) 1078 248.1 1.3e-62 gi|74137943|dbj|BAE24106.1| unnamed protein produc ( 477) 935 216.2 2.3e-53 >>gi|62087350|dbj|BAD92122.1| integrin alpha 4 precursor (854 aa) initn: 5614 init1: 5614 opt: 5614 Z-score: 6696.6 bits: 1250.2 E(): 0 Smith-Waterman score: 5614; 100.000% identity (100.000% similar) in 854 aa overlap (1-854:1-854) 10 20 30 40 50 60 sj0313 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAF 10 20 30 40 50 60 70 80 90 100 110 120 sj0313 LDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMK 70 80 90 100 110 120 130 140 150 160 170 180 sj0313 GKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMETNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMETNL 130 140 150 160 170 180 190 200 210 220 230 240 sj0313 VGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGISSTFSQRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGISSTFSQRI 190 200 210 220 230 240 250 260 270 280 290 300 sj0313 EGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTRPVVIVDASLSHPES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTRPVVIVDASLSHPES 250 260 270 280 290 300 310 320 330 340 350 360 sj0313 VNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYNMSLDVNRKAESPPRFYFSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYNMSLDVNRKAESPPRFYFSSN 310 320 330 340 350 360 370 380 390 400 410 420 sj0313 GTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIEAAYHLGPHVISKRSTEEFPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIEAAYHLGPHVISKRSTEEFPP 370 380 390 400 410 420 430 440 450 460 470 480 sj0313 LQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIGFLKPHENKTYLAVGSMKTLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIGFLKPHENKTYLAVGSMKTLM 430 440 450 460 470 480 490 500 510 520 530 540 sj0313 LNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINCEVTDNSGVVQLDCSIGYIYV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINCEVTDNSGVVQLDCSIGYIYV 490 500 510 520 530 540 550 560 570 580 590 600 sj0313 DHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDNLKHSRVTVAIPLKYEVKLTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDNLKHSRVTVAIPLKYEVKLTV 550 560 570 580 590 600 610 620 630 640 650 660 sj0313 HGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSMAPNVSVEIMVPNSFSPQTDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSMAPNVSVEIMVPNSFSPQTDK 610 620 630 640 650 660 670 680 690 700 710 720 sj0313 LFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQFLSKTDKRLLYCIKADPHCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQFLSKTDKRLLYCIKADPHCL 670 680 690 700 710 720 730 740 750 760 770 780 sj0313 NFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEIRATGFPEPNPRVIELNKDEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 NFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEIRATGFPEPNPRVIELNKDEN 730 740 750 760 770 780 790 800 810 820 830 840 sj0313 VAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYVMWKAGFFKRQYKSILQEENR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 VAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYVMWKAGFFKRQYKSILQEENR 790 800 810 820 830 840 850 sj0313 RDSWSYINSKSNDD :::::::::::::: gi|620 RDSWSYINSKSNDD 850 >>gi|119631390|gb|EAX10985.1| integrin, alpha 4 (antigen (1032 aa) initn: 5541 init1: 5541 opt: 5541 Z-score: 6608.3 bits: 1234.1 E(): 0 Smith-Waterman score: 5541; 99.763% identity (100.000% similar) in 844 aa overlap (11-854:189-1032) 10 20 30 40 sj0313 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGS .::::::::::::::::::::::::::::: gi|119 KLPTGGCYGVPPDLRTELSKRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGS 160 170 180 190 200 210 50 60 70 80 90 100 sj0313 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI 220 230 240 250 260 270 110 120 130 140 150 160 sj0313 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR 280 290 300 310 320 330 170 180 190 200 210 220 sj0313 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG 340 350 360 370 380 390 230 240 250 260 270 280 sj0313 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA 400 410 420 430 440 450 290 300 310 320 330 340 sj0313 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN 460 470 480 490 500 510 350 360 370 380 390 400 sj0313 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE 520 530 540 550 560 570 410 420 430 440 450 460 sj0313 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG 580 590 600 610 620 630 470 480 490 500 510 520 sj0313 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC 640 650 660 670 680 690 530 540 550 560 570 580 sj0313 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN 700 710 720 730 740 750 590 600 610 620 630 640 sj0313 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM 760 770 780 790 800 810 650 660 670 680 690 700 sj0313 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ 820 830 840 850 860 870 710 720 730 740 750 760 sj0313 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI 880 890 900 910 920 930 770 780 790 800 810 820 sj0313 RATGFPEPNPRVIELNKDENVAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|119 RATGFPEPNPRVIELNKDENVAHVLLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV 940 950 960 970 980 990 830 840 850 sj0313 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD :::::::::::::::::::::::::::::::::: gi|119 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD 1000 1010 1020 1030 >>gi|903744|gb|AAB59613.1| integrin alpha 4 subunit (1038 aa) initn: 5541 init1: 5541 opt: 5541 Z-score: 6608.3 bits: 1234.1 E(): 0 Smith-Waterman score: 5541; 99.763% identity (100.000% similar) in 844 aa overlap (11-854:195-1038) 10 20 30 40 sj0313 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGS .::::::::::::::::::::::::::::: gi|903 KLPTGGCYGVPPDLRTELSKRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGS 170 180 190 200 210 220 50 60 70 80 90 100 sj0313 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI 230 240 250 260 270 280 110 120 130 140 150 160 sj0313 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR 290 300 310 320 330 340 170 180 190 200 210 220 sj0313 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG 350 360 370 380 390 400 230 240 250 260 270 280 sj0313 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA 410 420 430 440 450 460 290 300 310 320 330 340 sj0313 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN 470 480 490 500 510 520 350 360 370 380 390 400 sj0313 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE 530 540 550 560 570 580 410 420 430 440 450 460 sj0313 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG 590 600 610 620 630 640 470 480 490 500 510 520 sj0313 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC 650 660 670 680 690 700 530 540 550 560 570 580 sj0313 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN 710 720 730 740 750 760 590 600 610 620 630 640 sj0313 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM 770 780 790 800 810 820 650 660 670 680 690 700 sj0313 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ 830 840 850 860 870 880 710 720 730 740 750 760 sj0313 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|903 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI 890 900 910 920 930 940 770 780 790 800 810 820 sj0313 RATGFPEPNPRVIELNKDENVAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|903 RATGFPEPNPRVIELNKDENVAHVLLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV 950 960 970 980 990 1000 830 840 850 sj0313 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD :::::::::::::::::::::::::::::::::: gi|903 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD 1010 1020 1030 >>gi|148922407|gb|AAI46278.1| Integrin, alpha 4 (antigen (1032 aa) initn: 5535 init1: 5535 opt: 5535 Z-score: 6601.2 bits: 1232.8 E(): 0 Smith-Waterman score: 5535; 99.645% identity (100.000% similar) in 844 aa overlap (11-854:189-1032) 10 20 30 40 sj0313 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGS .::::::::::::::::::::::::::::: gi|148 KLPTGGCYGVPPDLRTELSKRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGS 160 170 180 190 200 210 50 60 70 80 90 100 sj0313 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI 220 230 240 250 260 270 110 120 130 140 150 160 sj0313 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR 280 290 300 310 320 330 170 180 190 200 210 220 sj0313 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG 340 350 360 370 380 390 230 240 250 260 270 280 sj0313 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA 400 410 420 430 440 450 290 300 310 320 330 340 sj0313 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN 460 470 480 490 500 510 350 360 370 380 390 400 sj0313 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE 520 530 540 550 560 570 410 420 430 440 450 460 sj0313 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG 580 590 600 610 620 630 470 480 490 500 510 520 sj0313 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC 640 650 660 670 680 690 530 540 550 560 570 580 sj0313 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN 700 710 720 730 740 750 590 600 610 620 630 640 sj0313 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM 760 770 780 790 800 810 650 660 670 680 690 700 sj0313 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|148 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVR 820 830 840 850 860 870 710 720 730 740 750 760 sj0313 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI 880 890 900 910 920 930 770 780 790 800 810 820 sj0313 RATGFPEPNPRVIELNKDENVAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|148 RATGFPEPNPRVIELNKDENVAHVLLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV 940 950 960 970 980 990 830 840 850 sj0313 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD :::::::::::::::::::::::::::::::::: gi|148 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD 1000 1010 1020 1030 >>gi|124945|sp|P13612.1|ITA4_HUMAN Integrin alpha-4 prec (1038 aa) initn: 5535 init1: 5535 opt: 5535 Z-score: 6601.1 bits: 1232.8 E(): 0 Smith-Waterman score: 5535; 99.645% identity (100.000% similar) in 844 aa overlap (11-854:195-1038) 10 20 30 40 sj0313 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGS .::::::::::::::::::::::::::::: gi|124 KLPTGGCYGVPPDLRTELSKRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGS 170 180 190 200 210 220 50 60 70 80 90 100 sj0313 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI 230 240 250 260 270 280 110 120 130 140 150 160 sj0313 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR 290 300 310 320 330 340 170 180 190 200 210 220 sj0313 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG 350 360 370 380 390 400 230 240 250 260 270 280 sj0313 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA 410 420 430 440 450 460 290 300 310 320 330 340 sj0313 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN 470 480 490 500 510 520 350 360 370 380 390 400 sj0313 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE 530 540 550 560 570 580 410 420 430 440 450 460 sj0313 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG 590 600 610 620 630 640 470 480 490 500 510 520 sj0313 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC 650 660 670 680 690 700 530 540 550 560 570 580 sj0313 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN 710 720 730 740 750 760 590 600 610 620 630 640 sj0313 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM 770 780 790 800 810 820 650 660 670 680 690 700 sj0313 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|124 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVR 830 840 850 860 870 880 710 720 730 740 750 760 sj0313 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|124 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI 890 900 910 920 930 940 770 780 790 800 810 820 sj0313 RATGFPEPNPRVIELNKDENVAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|124 RATGFPEPNPRVIELNKDENVAHVLLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV 950 960 970 980 990 1000 830 840 850 sj0313 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD :::::::::::::::::::::::::::::::::: gi|124 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD 1010 1020 1030 >>gi|114582015|ref|XP_525977.2| PREDICTED: integrin alph (1032 aa) initn: 5527 init1: 5527 opt: 5527 Z-score: 6591.6 bits: 1231.0 E(): 0 Smith-Waterman score: 5527; 99.408% identity (100.000% similar) in 844 aa overlap (11-854:189-1032) 10 20 30 40 sj0313 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGS .::::::::::::::::::::::::::::: gi|114 KLPTGGCYGMPPDLRTELSKRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGS 160 170 180 190 200 210 50 60 70 80 90 100 sj0313 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|114 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFQSQHTTEVVGGAPQHEQI 220 230 240 250 260 270 110 120 130 140 150 160 sj0313 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR 280 290 300 310 320 330 170 180 190 200 210 220 sj0313 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG 340 350 360 370 380 390 230 240 250 260 270 280 sj0313 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA 400 410 420 430 440 450 290 300 310 320 330 340 sj0313 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|114 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCMDLTLCFSYKGKEVPGYIVLFYN 460 470 480 490 500 510 350 360 370 380 390 400 sj0313 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE 520 530 540 550 560 570 410 420 430 440 450 460 sj0313 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|114 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIIKKTINFARFCAHENCSADLQVSAKIG 580 590 600 610 620 630 470 480 490 500 510 520 sj0313 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC 640 650 660 670 680 690 530 540 550 560 570 580 sj0313 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN 700 710 720 730 740 750 590 600 610 620 630 640 sj0313 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM 760 770 780 790 800 810 650 660 670 680 690 700 sj0313 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ 820 830 840 850 860 870 710 720 730 740 750 760 sj0313 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI 880 890 900 910 920 930 770 780 790 800 810 820 sj0313 RATGFPEPNPRVIELNKDENVAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|114 RATGFPEPNPRVIELNKDENVAHVLLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV 940 950 960 970 980 990 830 840 850 sj0313 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD :::::::::::::::::::::::::::::::::: gi|114 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD 1000 1010 1020 1030 >>gi|109100261|ref|XP_001100929.1| PREDICTED: similar to (1032 aa) initn: 5406 init1: 5406 opt: 5406 Z-score: 6447.2 bits: 1204.3 E(): 0 Smith-Waterman score: 5406; 96.919% identity (99.052% similar) in 844 aa overlap (11-854:189-1032) 10 20 30 40 sj0313 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGS .::::::::::::::::::::::::::::: gi|109 KLPTGGCYGMPPDLRTELSKRIAPCYQDYVKKFGENFASCQAGISSFYTKDLIVMGAPGS 160 170 180 190 200 210 50 60 70 80 90 100 sj0313 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|109 SYWTGSLFVYNITTNKYKAFLDRQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI 220 230 240 250 260 270 110 120 130 140 150 160 sj0313 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GKAYIFGIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR 280 290 300 310 320 330 170 180 190 200 210 220 sj0313 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG :::::::::::::: ::::::::::::::::: ::::::::::::::::::::::::::: gi|109 VFVYINSGSGAVMNEMETNLVGSDKYAARFGECIVNLGDIDNDGFEDVAIGAPQEDDLQG 340 350 360 370 380 390 230 240 250 260 270 280 sj0313 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA :::::::::::.::.::::::::::::::::::::::::::::::::::::::::::::: gi|109 AIYIYNGRADGVSSAFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA 400 410 420 430 440 450 290 300 310 320 330 340 sj0313 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN :::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::::: gi|109 VLLRTRPVVIVEASLSHPESVNRTKFDCVENGWPSVCMDLTLCFSYKGKEVPGYIVLFYN 460 470 480 490 500 510 350 360 370 380 390 400 sj0313 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE ::::::::.::::::::::::::::::::::::: :::::::::::::::::::::::: gi|109 MSLDVNRKTESPPRFYFSSNGTSDVITGSIQVSSGVANCRTHQAFMRKDVRDILTPIQIE 520 530 540 550 560 570 410 420 430 440 450 460 sj0313 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG :::::::::::::::::::::::::::::::::.::::.::::::::::::::::::::: gi|109 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIIKKTISFARFCAHENCSADLQVSAKIG 580 590 600 610 620 630 470 480 490 500 510 520 sj0313 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC :.::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|109 FFKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPMGLYFIKILELEEKQINC 640 650 660 670 680 690 530 540 550 560 570 580 sj0313 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN :::::::.::::::::::::::::::::::::::::::::::::.:::::::::: :::: gi|109 EVTDNSGMVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLNITVHATCENEGEMDN 700 710 720 730 740 750 590 600 610 620 630 640 sj0313 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM :::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::: gi|109 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPEMCMVEKMNLTFHVINTGNSM 760 770 780 790 800 810 650 660 670 680 690 700 sj0313 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::. : gi|109 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMHTLKGMFQ 820 830 840 850 860 870 710 720 730 740 750 760 sj0313 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FLSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEI 880 890 900 910 920 930 770 780 790 800 810 820 sj0313 RATGFPEPNPRVIELNKDENVAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV :::.::::: :::::::::::::.:::::::::::::::::::::::::::::::::::: gi|109 RATSFPEPNSRVIELNKDENVAHVLLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYV 940 950 960 970 980 990 830 840 850 sj0313 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD :::::::::::::::::::::::::::::::::: gi|109 MWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD 1000 1010 1020 1030 >>gi|119631391|gb|EAX10986.1| integrin, alpha 4 (antigen (820 aa) initn: 5389 init1: 5389 opt: 5389 Z-score: 6428.2 bits: 1200.4 E(): 0 Smith-Waterman score: 5389; 99.878% identity (100.000% similar) in 820 aa overlap (35-854:1-820) 10 20 30 40 50 60 sj0313 VLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQ :::::::::::::::::::::::::::::: gi|119 MGAPGSSYWTGSLFVYNITTNKYKAFLDKQ 10 20 30 70 80 90 100 110 120 sj0313 NQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKL 40 50 60 70 80 90 130 140 150 160 170 180 sj0313 GSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMETNLVGSD 100 110 120 130 140 150 190 200 210 220 230 240 sj0313 KYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGISSTFSQRIEGLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGISSTFSQRIEGLQ 160 170 180 190 200 210 250 260 270 280 290 300 sj0313 ISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTRPVVIVDASLSHPESVNRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAVLLRTRPVVIVDASLSHPESVNRT 220 230 240 250 260 270 310 320 330 340 350 360 sj0313 KFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYNMSLDVNRKAESPPRFYFSSNGTSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYNMSLDVNRKAESPPRFYFSSNGTSD 280 290 300 310 320 330 370 380 390 400 410 420 sj0313 VITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIEAAYHLGPHVISKRSTEEFPPLQPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIEAAYHLGPHVISKRSTEEFPPLQPI 340 350 360 370 380 390 430 440 450 460 470 480 sj0313 LQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIGFLKPHENKTYLAVGSMKTLMLNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIGFLKPHENKTYLAVGSMKTLMLNVS 400 410 420 430 440 450 490 500 510 520 530 540 sj0313 LFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINCEVTDNSGVVQLDCSIGYIYVDHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINCEVTDNSGVVQLDCSIGYIYVDHLS 460 470 480 490 500 510 550 560 570 580 590 600 sj0313 RIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDNLKHSRVTVAIPLKYEVKLTVHGFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDNLKHSRVTVAIPLKYEVKLTVHGFV 520 530 540 550 560 570 610 620 630 640 650 660 sj0313 NPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSMAPNVSVEIMVPNSFSPQTDKLFNI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSMAPNVSVEIMVPNSFSPQTDKLFNI 580 590 600 610 620 630 670 680 690 700 710 720 sj0313 LDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQFLSKTDKRLLYCIKADPHCLNFLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQFLSKTDKRLLYCIKADPHCLNFLC 640 650 660 670 680 690 730 740 750 760 770 780 sj0313 NFGKMESGKEASVHIQLEGRPSILEMDETSALKFEIRATGFPEPNPRVIELNKDENVAHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|119 NFGKMESGKEASVHIQLEGRPSILEMDETSALKFEIRATGFPEPNPRVIELNKDENVAHV 700 710 720 730 740 750 790 800 810 820 830 840 sj0313 LLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYVMWKAGFFKRQYKSILQEENRRDSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYVMWKAGFFKRQYKSILQEENRRDSW 760 770 780 790 800 810 850 sj0313 SYINSKSNDD :::::::::: gi|119 SYINSKSNDD 820 >>gi|194222366|ref|XP_001917636.1| PREDICTED: integrin, (1034 aa) initn: 5049 init1: 4180 opt: 5050 Z-score: 6022.1 bits: 1125.6 E(): 0 Smith-Waterman score: 5050; 89.586% identity (97.278% similar) in 845 aa overlap (11-854:189-1033) 10 20 30 40 sj0313 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGS .::::::::::::::::::.:::::::::: gi|194 KLPTGVCYGMPSDLRAELSKRIAPCYQDFVKKFGENFASCQAGISSFYTEDLIVMGAPGS 160 170 180 190 200 210 50 60 70 80 90 100 sj0313 SYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|194 SYWTGSLFVYNITTNKYKAFLDKENQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQI 220 230 240 250 260 270 110 120 130 140 150 160 sj0313 GKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGR ::::::::: :::::::::::::::::::::::::::::::::::::::::::.:::::: gi|194 GKAYIFSIDAKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSVIREEGR 280 290 300 310 320 330 170 180 190 200 210 220 sj0313 VFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQG :::::::::::::: :::.:.::::::::::::::::::::::::::.::::::::::.: gi|194 VFVYINSGSGAVMNEMETELTGSDKYAARFGESIVNLGDIDNDGFEDIAIGAPQEDDLRG 340 350 360 370 380 390 230 240 250 260 270 280 sj0313 AIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA :::::::::.::::.::::::::::::::::::::::::::::::::::::::::::::: gi|194 AIYIYNGRAEGISSAFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSA 400 410 420 430 440 450 290 300 310 320 330 340 sj0313 VLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYN :.:::::::::.:::.::::::::.:::.::: ::::.:: ::::::::::::::::::: gi|194 VVLRTRPVVIVEASLNHPESVNRTNFDCIENGLPSVCMDLKLCFSYKGKEVPGYIVLFYN 460 470 480 490 500 510 350 360 370 380 390 400 sj0313 MSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIE :::::::::::: ::::::::::::::::..:::: :::::::::::::::::::::::. gi|194 MSLDVNRKAESPSRFYFSSNGTSDVITGSMKVSSRAANCRTHQAFMRKDVRDILTPIQIK 520 530 540 550 560 570 410 420 430 440 450 460 sj0313 AAYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIG :::::: :::::::::::::::::::::.:::...:::::::::::::::::::.::::: gi|194 AAYHLGHHVISKRSTEEFPPLQPILQQKREKDVIEKTINFARFCAHENCSADLQLSAKIG 580 590 600 610 620 630 470 480 490 500 510 520 sj0313 FLKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINC ::::::::::::::.:::::::::::::::::::::::.:::.::::::::.:::::::: gi|194 FLKPHENKTYLAVGNMKTLMLNVSLFNAGDDAYETTLHIKLPTGLYFIKILDLEEKQINC 640 650 660 670 680 690 530 540 550 560 570 580 sj0313 EVTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDN ::::.::.:.:::..::::::::::::.:::::.::::::::::.:::::.:::: :::. gi|194 EVTDSSGIVKLDCNVGYIYVDHLSRIDVSFLLDASSLSRAEEDLNITVHAACENEGEMDD 700 710 720 730 740 750 590 600 610 620 630 640 sj0313 LKHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSM :: ..::.:::::::: :.:::::.:::::::: .:::: :::.::::::::::::: :: gi|194 LKSNKVTLAIPLKYEVMLAVHGFVSPTSFVYGSAEENEPGTCMAEKMNLTFHVINTGYSM 760 770 780 790 800 810 650 660 670 680 690 700 sj0313 APNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQ :::::::::::::: :::.::::::::::: :::.::::. :. ::::.:..::: : . gi|194 APNVSVEIMVPNSFIPQTNKLFNILDVQTTMGECRFENYESNCVSEQQKGALETLKDIFR 820 830 840 850 860 870 710 720 730 740 750 sj0313 FLSKTDKRLLYCI-KADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFE :::::::::: . .:::.::::::::::::::::::::.:::::::::::::::::::: gi|194 FLSKTDKRLLVILHEADPNCLNFLCNFGKMESGKEASVHVQLEGRPSILEMDETSALKFE 880 890 900 910 920 930 760 770 780 790 800 810 sj0313 IRATGFPEPNPRVIELNKDENVAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISY ::::.:::::::::::::::::::.::::::::::::.:::.:::::::::::.::.::: gi|194 IRATAFPEPNPRVIELNKDENVAHVLLEGLHHQRPKRHFTIAIISSSLLLGLILLLFISY 940 950 960 970 980 990 820 830 840 850 sj0313 VMWKAGFFKRQYKSILQEENRRDSWSYINSKSNDD ::::.::::::::::::::::::::::.::::::: gi|194 VMWKVGFFKRQYKSILQEENRRDSWSYVNSKSNDDD 1000 1010 1020 1030 >>gi|74004929|ref|XP_545551.2| PREDICTED: similar to Int (1165 aa) initn: 4648 init1: 3449 opt: 4941 Z-score: 5891.2 bits: 1101.6 E(): 0 Smith-Waterman score: 4941; 87.544% identity (96.679% similar) in 843 aa overlap (12-854:325-1164) 10 20 30 40 sj0313 KNSSVLSRLCEKFGENFASCQAGISSFYTKDLIVMGAPGSS ::::::::::::::::::.::::::::::: gi|740 LPMGVCYGMPSDLRTELSKRIAPCYQDYVRKFGENFASCQAGISSFYTEDLIVMGAPGSS 300 310 320 330 340 350 50 60 70 80 90 100 sj0313 YWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQHEQIG :::::::::::::::::::::.::::::::::::::::::::: :::::::::::::::: gi|740 YWTGSLFVYNITTNKYKAFLDRQNQVKFGSYLGYSVGAGHFRSPHTTEVVGGAPQHEQIG 360 370 380 390 400 410 110 120 130 140 150 160 sj0313 KAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRV :::::::. :::.::::::::::::::::::::::::::::::::::::::::::::::: gi|740 KAYIFSIEAKELSILHEMKGKKLGSYFGASVCAVDLNADGFSDLLVGAPMQSTIREEGRV 420 430 440 450 460 470 170 180 190 200 210 220 sj0313 FVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNLGDIDNDGFEDVAIGAPQEDDLQGA ::::::::::::: :::.:.::::::::::::::::::::::::::::.::::::::.:: gi|740 FVYINSGSGAVMNEMETELIGSDKYAARFGESIVNLGDIDNDGFEDVAVGAPQEDDLRGA 480 490 500 510 520 530 230 240 250 260 270 280 sj0313 IYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAV .:::::::::::..:::::::.:::::::::::::::::::::::::::::::::::::: gi|740 VYIYNGRADGISTAFSQRIEGFQISKSLSMFGQSISGQIDADNNGYVDVAVGAFRSDSAV 540 550 560 570 580 590 290 300 310 320 330 340 sj0313 LLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCIDLTLCFSYKGKEVPGYIVLFYNM ::::::::::..::.::::::::.::::::: ::::.:::::::::::::::::::.::: gi|740 LLRTRPVVIVEVSLNHPESVNRTNFDCVENGLPSVCMDLTLCFSYKGKEVPGYIVLLYNM 600 610 620 630 640 650 350 360 370 380 390 400 sj0313 SLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREANCRTHQAFMRKDVRDILTPIQIEA ::::::: .:: ::::::::::::::::..:::. :::::::::::::::::::::::: gi|740 SLDVNRKIDSPSRFYFSSNGTSDVITGSMKVSSKVPNCRTHQAFMRKDVRDILTPIQIEA 660 670 680 690 700 710 410 420 430 440 450 460 sj0313 AYHLGPHVISKRSTEEFPPLQPILQQKKEKDIMKKTINFARFCAHENCSADLQVSAKIGF ::.:: ::: :::::::::::::::::::.::..::::::::::::::::::::::.::: gi|740 AYRLGQHVIRKRSTEEFPPLQPILQQKKERDIIEKTINFARFCAHENCSADLQVSARIGF 720 730 740 750 760 770 470 480 490 500 510 520 sj0313 LKPHENKTYLAVGSMKTLMLNVSLFNAGDDAYETTLHVKLPVGLYFIKILELEEKQINCE :::::::::.:::::::.::::::::::::::::.::..:: ::::::::.::::::::: gi|740 LKPHENKTYVAVGSMKTVMLNVSLFNAGDDAYETALHIRLPSGLYFIKILDLEEKQINCE 780 790 800 810 820 830 530 540 550 560 570 580 sj0313 VTDNSGVVQLDCSIGYIYVDHLSRIDISFLLDVSSLSRAEEDLSITVHATCENEEEMDNL :::.:: :.:::::::::.:.:::.::::::::::::.::::::.:::::: ::.::::: gi|740 VTDSSGSVKLDCSIGYIYMDRLSRMDISFLLDVSSLSQAEEDLSLTVHATCANEREMDNL 840 850 860 870 880 890 590 600 610 620 630 640 sj0313 KHSRVTVAIPLKYEVKLTVHGFVNPTSFVYGSNDENEPETCMVEKMNLTFHVINTGNSMA ..::.:::::::: :.::::::::::.:: ..::::.:::.::::.::::::::.::: gi|740 --NKVTLAIPLKYEVMLSVHGFVNPTSFIYGPKEENEPDTCMAEKMNFTFHVINTGHSMA 900 910 920 930 940 950 650 660 670 680 690 700 sj0313 PNVSVEIMVPNSFSPQTDKLFNILDVQTTTGECHFENYQRVCALEQQKSAMQTLKGIVQF :::::::::::::.::::::::::::: . :::::..::: :::::.:.::. :: : : gi|740 PNVSVEIMVPNSFAPQTDKLFNILDVQPA-GECHFKTYQRKCALEQEKGAMKILKDIFTF 960 970 980 990 1000 1010 710 720 730 740 750 760 sj0313 LSKTDKRLLYCIKADPHCLNFLCNFGKMESGKEASVHIQLEGRPSILEMDETSALKFEIR ::::::.::.:.::::.::..::..::::::::::::::::::: . :::::::::::.: gi|740 LSKTDKKLLFCMKADPYCLTILCHLGKMESGKEASVHIQLEGRPYLSEMDETSALKFEVR 1020 1030 1040 1050 1060 1070 770 780 790 800 810 820 sj0313 ATGFPEPNPRVIELNKDENVAHALLEGLHHQRPKRYFTIVIISSSLLLGLIVLLLISYVM .:.::::::.::::::::::::.::::::::::::.:::.:: ::::::::.::::: :: gi|740 VTAFPEPNPKVIELNKDENVAHVLLEGLHHQRPKRHFTIAIILSSLLLGLILLLLISCVM 1080 1090 1100 1110 1120 1130 830 840 850 sj0313 WKAGFFKRQYKSILQEENRRDSWSYINSKSNDD :::::::::::::::::::::::::.::::::: gi|740 WKAGFFKRQYKSILQEENRRDSWSYVNSKSNDDD 1140 1150 1160 854 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Wed Aug 13 19:37:02 2008 done: Wed Aug 13 19:39:00 2008 Total Scan time: 1014.690 Total Display time: 0.480 Function used was FASTA [version 34.26.5 April 26, 2007]