hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-19512274/chunk_1/iprscan-20080813-19512274.nocrc
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Query sequence: sj03402
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00400.22.fs WD domain, G-beta repeat                        33.3    2.1e-08   2
PF00400.22.ls WD domain, G-beta repeat                        33.0    9.8e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00400.22.fs   1/2      63   101 ..     1    38 []    31.0  9.1e-08
PF00400.22.ls   1/1      63   101 ..     1    38 []    33.0  9.8e-07

Alignments of top-scoring domains:
PF00400.22.fs: domain 1 of 2, from 63 to 101: score 31.0, E = 9.1e-08
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                         +  ++ H+s V+ v+++   g++las+++Dg++++W+   
     sj03402    63    IHIVaQFdNHNSQVWRVSWNIT-GTVLASSGDDGCVRLWK    101  

PF00400.22.ls: domain 1 of 1, from 63 to 101: score 33.0, E = 9.8e-07
                   *->geck.vl.gHtstVtcvafspdsgpllasgSrDgtikiWd<-*
                         +  ++ H+s V+ v+++   g++las+++Dg++++W+   
     sj03402    63    IHIVaQFdNHNSQVWRVSWNIT-GTVLASSGDDGCVRLWK    101  

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