hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-19512274/chunk_1/iprscan-20080813-19512274.nocrc
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Query sequence: sj03402
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                  37.2    2.2e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/1      62   101 ..     1    46 []    37.2  2.2e-06

Alignments of top-scoring domains:
SM00320: domain 1 of 1, from 62 to 101: score 37.2, E = 2.2e-06
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      +   ++ ++ H++   V+ v+++ +g      ++las+++Dg++rlW
     sj03402    62    EiHIVAQFDNHNS--QVWRVSWNITG------TVLASSGdDGCVRLW 100  

                   d<-*
                   +   
     sj03402   101 K    101  

//