hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-18375102/chunk_1/iprscan-20090618-18375102.nocrc
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Query sequence: sj03926
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02213.6.ls GYF domain                                     102.8    9.4e-28   1
PF02213.6.fs GYF domain                                     100.8      2e-27   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02213.6.fs   1/1     493   548 ..     1    59 []   100.8    2e-27
PF02213.6.ls   1/1     493   548 ..     1    59 []   102.8  9.4e-28

Alignments of top-scoring domains:
PF02213.6.fs: domain 1 of 1, from 493 to 548: score 100.8, E = 2e-27
                   *->vlwlYkDpNkqgeiqGPFtasqMsqWyqaGYFtdslqvkrldeperi
                       +w+YkDp  qgeiqGPFt+++M++W+qaGYF++sl vkr++++++ 
     sj03926   493    RKWFYKDP--QGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGF- 536  

                   eplgdlkrligl<-*
                   +plg +++++g+   
     sj03926   537 QPLGEVIKMWGR    548  

PF02213.6.ls: domain 1 of 1, from 493 to 548: score 102.8, E = 9.4e-28
                   *->vlwlYkDpNkqgeiqGPFtasqMsqWyqaGYFtdslqvkrldeperi
                       +w+YkDp  qgeiqGPFt+++M++W+qaGYF++sl vkr++++++ 
     sj03926   493    RKWFYKDP--QGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGF- 536  

                   eplgdlkrligl<-*
                   +plg +++++g+   
     sj03926   537 QPLGEVIKMWGR    548  

//