hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-18375102/chunk_1/iprscan-20090618-18375102.nocrc
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Query sequence: sj03926
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00444                                                 100.1    2.6e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00444    1/1     493   548 ..     1    59 []   100.1  2.6e-25

Alignments of top-scoring domains:
SM00444: domain 1 of 1, from 493 to 548: score 100.1, E = 2.6e-25
                   *->vlWlYkDpNkdgeiqGPFtasqMsqWyqaGYFtdsLqikrlnepeyi
                       +W+YkDp  +geiqGPFt+++M++W+qaGYF++sL +kr +++++ 
     sj03926   493    RKWFYKDP--QGEIQGPFTTQEMAEWFQAGYFSMSLLVKRGCDEGF- 536  

                   dslgdldrllgl<-*
                   ++lg++++++g+   
     sj03926   537 QPLGEVIKMWGR    548  

//