hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080813/iprscan-20080813-20425167/chunk_1/iprscan-20080813-20425167.nocrc
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Query sequence: sj05248
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00596.11.fs Class II Aldolase and Adducin N-terminal    204.6    6.6e-60   1
PF00596.11.ls Class II Aldolase and Adducin N-terminal    171.9    1.5e-48   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00596.11.ls   1/1       1   196 [.     1   229 []   171.9  1.5e-48
PF00596.11.fs   1/1      11   196 ..    34   229 .]   204.6  6.6e-60

Alignments of top-scoring domains:
PF00596.11.ls: domain 1 of 1, from 1 to 196: score 171.9, E = 1.5e-48
                   *->qelaaacrllalyGLvtgtaGniSvrvrergeqdlflIkPsGvpyde
                        ++  c                 v  +e      ++I PsGv++++
     sj05248     1    IPICMFC-----------------VASDE------IYIAPSGVQKER 24   

                   mtasDlvvvDldgGevleGespgetkflkPssetplHlalYrarPdvgai
                   ++++D++v+D++ ++ ++G+sp  +k lk s++tpl++ +Y  ++ +ga+
     sj05248    25 IQPEDMFVCDIN-EKDISGPSP--SKKLKKSQCTPLFMNAYT-MRGAGAV 70   

                   vHtHsphatalSqlgeglpplgtthadyfgvmrygdvpctdyag..YdeE
                   +HtHs +a++ ++l +   ++ +th +++    +g   ct   + +Yd++
     sj05248    71 IHTHSKAAVMATLLFP-GREFKITHQEMI----KGIKKCTSGGYyrYDDM 115  

                   ivgdyeenTGgEkVevellakalgapkgrpAvLlrnHGpvtwGkdaetae
                   +v++++enT++Ek++++++a+a+ ++++++AvL+r+HG+++wG   et+e
     sj05248   116 LVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVLVRRHGVYVWG---ETWE 162  

                   eAavvleeveraaeiqlllksagipmdplllpke<-*
                   +A++++e++++++ i++ +k++g+++ +l   +    
     sj05248   163 KAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGEN    196  

PF00596.11.fs: domain 1 of 1, from 11 to 196: score 204.6, E = 6.6e-60
                   *->dlflIkPsGvpydemtasDlvvvDldgGevleGespgetkflkPsse
                      d+++I PsGv++++++++D++v+D++ ++ ++G+sp  +k lk s++
     sj05248    11    DEIYIAPSGVQKERIQPEDMFVCDIN-EKDISGPSP--SKKLKKSQC 54   

                   tplHlalYrarPdvgaivHtHsphatalSqlgeglpplgtthadyfgvmr
                   tpl++ +Y  ++ +ga++HtHs +a++ ++l +   ++ +th +++    
     sj05248    55 TPLFMNAYT-MRGAGAVIHTHSKAAVMATLLFP-GREFKITHQEMI---- 98   

                   ygdvpctdyag..YdeEivgdyeenTGgEkVevellakalgapkgrpAvL
                   +g   ct   + +Yd+++v++++enT++Ek++++++a+a+ ++++++AvL
     sj05248    99 KGIKKCTSGGYyrYDDMLVVPIIENTPEEKDLKDRMAHAMNEYPDSCAVL 148  

                   lrnHGpvtwGkdaetaeeAavvleeveraaeiqlllksagipmdplllpk
                   +r+HG+++wG   et+e+A++++e++++++ i++ +k++g+++ +l   +
     sj05248   149 VRRHGVYVWG---ETWEKAKTMCECYDYLFDIAVSMKKVGLDPSQLPVGE 195  

                   e<-*
                       
     sj05248   196 N    196  

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