hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20090618/iprscan-20090618-18504217/chunk_1/iprscan-20090618-18504217.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: sj06327 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR02251 HIF-SF_euk: Dullard-like phosphatase domai 334.3 6.6e-98 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR02251 1/1 101 265 .. 1 193 [] 334.3 6.6e-98 Alignments of top-scoring domains: TIGR02251: domain 1 of 1, from 101 to 265: score 334.3, E = 6.6e-98 *->kkTLVLDLDETLVHSyelswfhktlkrpkrnpgidaDfkvpvlidgs + ++V+DLDETLVHS ++k++ +aDf+vp++i+g sj06327 101 RICVVIDLDETLVHS--------SFKPIN-----NADFIVPIEIEG- 133 tdkeydGkkkiilvYVfKRPhvdeFLervsewYelViFTAsleeYAdpVl + ++vYV+KRP+vdeFL+r++e++e+V+FTAsl++YAdpV sj06327 134 ---------TTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVT 174 DiLDrkrklVisrRLYResCvftnGklYvKDLslvgrDLSkviIiDNSPy D+LD + ++ +++RL+ResCvf++G YvKDLs++grDL+k++I+DNSP+ sj06327 175 DLLD-RCGV-FRARLFRESCVFHQGC-YVKDLSRLGRDLRKTLILDNSPA 221 SYslqpdNgIPIkswfsDpnDteLLkLiPFLeaLLrfnedDVRsll<-* SY+++p+N++P++swf+D+ DteLL+LiP +e L+ +DV+ l sj06327 222 SYIFHPENAVPVQSWFDDMADTELLNLIPIFEE-LSG-AEDVYTSL 265 //