# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Osj06327.fasta.nr -Q sj06327.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 sj06327, 271 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8982157 sequences Expectation_n fit: rho(ln(x))= 4.6987+/-0.00018; mu= 10.5479+/- 0.010 mean_var=57.6342+/-11.435, 0's: 35 Z-trim: 50 B-trim: 1142 in 1/64 Lambda= 0.168941 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|55584145|sp|O14595.2|CTDS2_HUMAN RecName: Full= ( 271) 1806 448.2 8e-124 gi|4103320|gb|AAD09331.1| unknown protein [Homo sa ( 271) 1800 446.7 2.2e-123 gi|86823928|gb|AAI05532.1| CTD (carboxy-terminal d ( 271) 1792 444.8 8.5e-123 gi|73968605|ref|XP_538256.2| PREDICTED: similar to ( 271) 1790 444.3 1.2e-122 gi|119617488|gb|EAW97082.1| CTD (carboxy-terminal ( 277) 1784 442.8 3.3e-122 gi|2454302|gb|AAB71816.1| OS-4 protein [Homo sapie ( 283) 1777 441.1 1.1e-121 gi|51701335|sp|Q8BX07.1|CTDS2_MOUSE RecName: Full= ( 270) 1718 426.7 2.3e-117 gi|149715358|ref|XP_001488920.1| PREDICTED: simila ( 251) 1661 412.8 3.3e-113 gi|126343824|ref|XP_001380778.1| PREDICTED: hypoth ( 317) 1596 397.0 2.3e-108 gi|119617494|gb|EAW97088.1| CTD (carboxy-terminal ( 260) 1518 378.0 1e-102 gi|17046469|gb|AAL34532.1|AF441288_1 Os4 [Xenopus ( 271) 1489 370.9 1.4e-100 gi|49903624|gb|AAH76658.1| CTD (carboxy-terminal d ( 271) 1468 365.8 5e-99 gi|149538573|ref|XP_001509752.1| PREDICTED: hypoth ( 477) 1469 366.2 6.6e-99 gi|59807669|gb|AAH89307.1| Ctdsp2 protein [Mus mus ( 212) 1382 344.8 8.4e-93 gi|209156250|gb|ACI34357.1| Carboxy-terminal domai ( 271) 1376 343.4 2.8e-92 gi|150261544|pdb|2Q5E|A Chain A, Crystal Structure ( 187) 1244 311.1 1e-82 gi|17865514|sp|Q9PTJ6.2|CTDSL_CHICK RecName: Full= ( 275) 1127 282.7 5.3e-74 gi|39645925|gb|AAH63974.1| Zgc:77714 [Danio rerio] ( 258) 1118 280.5 2.3e-73 gi|209156204|gb|ACI34334.1| Carboxy-terminal domai ( 260) 1100 276.1 4.9e-72 gi|32396218|gb|AAP43959.1| NIF [Xenopus laevis] ( 276) 1097 275.4 8.5e-72 gi|51704302|sp|P58465.2|CTDSL_MOUSE RecName: Full= ( 276) 1084 272.2 7.6e-71 gi|92399505|gb|ABE76501.1| SCP3-like protein [Must ( 276) 1084 272.2 7.6e-71 gi|62948141|gb|AAH94289.1| CTD (carboxy-terminal d ( 276) 1084 272.2 7.6e-71 gi|148677300|gb|EDL09247.1| CTD (carboxy-terminal ( 288) 1084 272.2 7.9e-71 gi|51704233|sp|O15194.2|CTDSL_HUMAN RecName: Full= ( 276) 1083 272.0 9e-71 gi|114586012|ref|XP_001170973.1| PREDICTED: small ( 297) 1083 272.0 9.5e-71 gi|114586010|ref|XP_516364.2| PREDICTED: small CTD ( 307) 1083 272.0 9.8e-71 gi|149623889|ref|XP_001521318.1| PREDICTED: simila ( 361) 1076 270.3 3.6e-70 gi|119914304|ref|XP_872486.2| PREDICTED: similar t ( 277) 1071 269.1 6.9e-70 gi|223648574|gb|ACN11045.1| Carboxy-terminal domai ( 260) 1069 268.5 9.1e-70 gi|109041778|ref|XP_001086442.1| PREDICTED: simila ( 740) 1069 268.9 2.1e-69 gi|169154264|emb|CAQ15457.1| novel protein similar ( 265) 999 251.5 1.3e-64 gi|6572958|gb|AAF17484.1|AF189776_1 NLI-interactin ( 264) 994 250.3 2.9e-64 gi|6572954|gb|AAF17482.1|AF189774_1 NLI-interactin ( 293) 994 250.3 3.2e-64 gi|229367296|gb|ACQ58628.1| Carboxy-terminal domai ( 262) 991 249.5 4.9e-64 gi|194221495|ref|XP_001489080.2| PREDICTED: simila ( 257) 990 249.3 5.7e-64 gi|31074181|gb|AAP34400.1| small CTD phosphatase 3 ( 265) 990 249.3 5.8e-64 gi|2289786|dbj|BAA21667.1| HYA22 [Homo sapiens] ( 340) 990 249.4 7.1e-64 gi|211063463|ref|NP_001038912.2| small CTD phospha ( 265) 985 248.1 1.4e-63 gi|47221014|emb|CAF98243.1| unnamed protein produc ( 258) 983 247.6 1.9e-63 gi|31074177|gb|AAP34398.1| small CTD phosphatase 1 ( 213) 982 247.3 1.9e-63 gi|115313384|gb|AAI24543.1| CTD (carboxy-terminal ( 266) 982 247.3 2.3e-63 gi|114583310|ref|XP_001156881.1| PREDICTED: CTD (c ( 261) 981 247.1 2.6e-63 gi|17865510|sp|Q9GZU7.1|CTDS1_HUMAN RecName: Full= ( 261) 981 247.1 2.6e-63 gi|119888428|ref|XP_594344.3| PREDICTED: similar t ( 261) 981 247.1 2.6e-63 gi|149016108|gb|EDL75354.1| rCG23761 [Rattus norve ( 261) 980 246.9 3.1e-63 gi|74005486|ref|XP_851188.1| PREDICTED: similar to ( 261) 980 246.9 3.1e-63 gi|193631995|ref|XP_001944419.1| PREDICTED: simila ( 288) 980 246.9 3.4e-63 gi|119591022|gb|EAW70616.1| CTD (carboxy-terminal ( 255) 976 245.9 6e-63 gi|148667909|gb|EDL00326.1| CTD (carboxy-terminal ( 209) 975 245.6 6.1e-63 >>gi|55584145|sp|O14595.2|CTDS2_HUMAN RecName: Full=Carb (271 aa) initn: 1806 init1: 1806 opt: 1806 Z-score: 2380.3 bits: 448.2 E(): 8e-124 Smith-Waterman score: 1806; 100.000% identity (100.000% similar) in 271 aa overlap (1-271:1-271) 10 20 30 40 50 60 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|555 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA 10 20 30 40 50 60 70 80 90 100 110 120 sj0632 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|555 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI 70 80 90 100 110 120 130 140 150 160 170 180 sj0632 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|555 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC 130 140 150 160 170 180 190 200 210 220 230 240 sj0632 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|555 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM 190 200 210 220 230 240 250 260 270 sj0632 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP ::::::::::::::::::::::::::::::: gi|555 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP 250 260 270 >>gi|4103320|gb|AAD09331.1| unknown protein [Homo sapien (271 aa) initn: 1800 init1: 1800 opt: 1800 Z-score: 2372.4 bits: 446.7 E(): 2.2e-123 Smith-Waterman score: 1800; 99.631% identity (100.000% similar) in 271 aa overlap (1-271:1-271) 10 20 30 40 50 60 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 MEHGSIITHARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA 10 20 30 40 50 60 70 80 90 100 110 120 sj0632 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI 70 80 90 100 110 120 130 140 150 160 170 180 sj0632 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC 130 140 150 160 170 180 190 200 210 220 230 240 sj0632 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|410 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM 190 200 210 220 230 240 250 260 270 sj0632 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP ::::::::::::::::::::::::::::::: gi|410 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP 250 260 270 >>gi|86823928|gb|AAI05532.1| CTD (carboxy-terminal domai (271 aa) initn: 1792 init1: 1792 opt: 1792 Z-score: 2361.9 bits: 444.8 E(): 8.5e-123 Smith-Waterman score: 1792; 98.524% identity (99.631% similar) in 271 aa overlap (1-271:1-271) 10 20 30 40 50 60 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::. gi|868 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSTSSTELS 10 20 30 40 50 60 70 80 90 100 110 120 sj0632 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 PYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI 70 80 90 100 110 120 130 140 150 160 170 180 sj0632 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 NNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC 130 140 150 160 170 180 190 200 210 220 230 240 sj0632 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|868 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM 190 200 210 220 230 240 250 260 270 sj0632 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP ::::::::::::::::::::::::::::::: gi|868 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP 250 260 270 >>gi|73968605|ref|XP_538256.2| PREDICTED: similar to Car (271 aa) initn: 1790 init1: 1790 opt: 1790 Z-score: 2359.3 bits: 444.3 E(): 1.2e-122 Smith-Waterman score: 1790; 98.155% identity (100.000% similar) in 271 aa overlap (1-271:1-271) 10 20 30 40 50 60 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::. gi|739 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKAFFCCFRAQHVGQSSSSTELS 10 20 30 40 50 60 70 80 90 100 110 120 sj0632 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|739 AYKEEANTIAKSDLLHCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI 70 80 90 100 110 120 130 140 150 160 170 180 sj0632 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC :::::.::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NNADFVVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC 130 140 150 160 170 180 190 200 210 220 230 240 sj0632 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM 190 200 210 220 230 240 250 260 270 sj0632 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP ::::::::::::::::::::::::::::::: gi|739 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP 250 260 270 >>gi|119617488|gb|EAW97082.1| CTD (carboxy-terminal doma (277 aa) initn: 1259 init1: 1259 opt: 1784 Z-score: 2351.2 bits: 442.8 E(): 3.3e-122 Smith-Waterman score: 1784; 97.834% identity (97.834% similar) in 277 aa overlap (1-271:1-277) 10 20 30 40 50 60 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA 10 20 30 40 50 60 70 80 90 100 110 sj0632 AYKEEANTIAKSDLLQCLQYQFYQ------IPGTCLLPEVTEEDQGRICVVIDLDETLVH :::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|119 AYKEEANTIAKSDLLQCLQYQFYQVRDSGLIPGTCLLPEVTEEDQGRICVVIDLDETLVH 70 80 90 100 110 120 120 130 140 150 160 170 sj0632 SSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVT 130 140 150 160 170 180 180 190 200 210 220 230 sj0632 DLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQ 190 200 210 220 230 240 240 250 260 270 sj0632 SWFDDMADTELLNLIPIFEELSGAEDVYTSLGQLRAP ::::::::::::::::::::::::::::::::::::: gi|119 SWFDDMADTELLNLIPIFEELSGAEDVYTSLGQLRAP 250 260 270 >>gi|2454302|gb|AAB71816.1| OS-4 protein [Homo sapiens] (283 aa) initn: 1772 init1: 1772 opt: 1777 Z-score: 2341.9 bits: 441.1 E(): 1.1e-121 Smith-Waterman score: 1777; 98.524% identity (98.893% similar) in 271 aa overlap (1-271:1-271) 10 20 30 40 50 60 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|245 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA 10 20 30 40 50 60 70 80 90 100 110 120 sj0632 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|245 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI 70 80 90 100 110 120 130 140 150 160 170 180 sj0632 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|245 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC 130 140 150 160 170 180 190 200 210 220 230 240 sj0632 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|245 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM 190 200 210 220 230 240 250 260 270 sj0632 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP :::::::::::::::::::::::::: .: gi|245 ADTELLNLIPIFEELSGAEDVYTSLGAAAGPLACPASKRRPSQ 250 260 270 280 >>gi|51701335|sp|Q8BX07.1|CTDS2_MOUSE RecName: Full=Carb (270 aa) initn: 1393 init1: 1393 opt: 1718 Z-score: 2264.4 bits: 426.7 E(): 2.3e-117 Smith-Waterman score: 1718; 94.465% identity (99.262% similar) in 271 aa overlap (1-271:1-270) 10 20 30 40 50 60 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA :::::::::::::::::::::::::::::::::::.:::::.:::..::: ::::::::. gi|517 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRSIFKALLCCFHTQHVVQSSSSTELT 10 20 30 40 50 60 70 80 90 100 110 120 sj0632 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI .::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|517 -HKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEQDQGRICVVIDLDETLVHSSFKPI 70 80 90 100 110 130 140 150 160 170 180 sj0632 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|517 NNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC 120 130 140 150 160 170 190 200 210 220 230 240 sj0632 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM ::::::::::.::::::::::::::::::::::.:::::::::::::::::::::::::: gi|517 GVFRARLFREACVFHQGCYVKDLSRLGRDLRKTVILDNSPASYIFHPENAVPVQSWFDDM 180 190 200 210 220 230 250 260 270 sj0632 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP ::::::::::.::::::..:::::::::::: gi|517 ADTELLNLIPVFEELSGTDDVYTSLGQLRAP 240 250 260 270 >>gi|149715358|ref|XP_001488920.1| PREDICTED: similar to (251 aa) initn: 1661 init1: 1661 opt: 1661 Z-score: 2189.8 bits: 412.8 E(): 3.3e-113 Smith-Waterman score: 1661; 98.400% identity (99.600% similar) in 250 aa overlap (22-271:2-251) 10 20 30 40 50 60 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA ::::::::::::::::::::::::::::::::: ::::. gi|149 MGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSPSTELS 10 20 30 40 70 80 90 100 110 120 sj0632 AYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDETLVHSSFKPI 50 60 70 80 90 100 130 140 150 160 170 180 sj0632 NNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NNADFIVPVEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRC 110 120 130 140 150 160 190 200 210 220 230 240 sj0632 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQSWFDDM 170 180 190 200 210 220 250 260 270 sj0632 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP ::::::::::::::::::::::::::::::: gi|149 ADTELLNLIPIFEELSGAEDVYTSLGQLRAP 230 240 250 >>gi|126343824|ref|XP_001380778.1| PREDICTED: hypothetic (317 aa) initn: 1596 init1: 1596 opt: 1596 Z-score: 2102.8 bits: 397.0 E(): 2.3e-108 Smith-Waterman score: 1596; 92.829% identity (98.805% similar) in 251 aa overlap (21-271:67-317) 10 20 30 40 50 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHV .::.:.::::::::::::::.:::::.::: gi|126 REDMSSTGKDDQEFCVVGDNQPRNGRKWRGRGLISRSSPKKPRGRNIFKAFFCCFRTQHV 40 50 60 70 80 90 60 70 80 90 100 110 sj0632 GQSSSSTELAAYKEEANTIAKSDLLQCLQYQFYQIPGTCLLPEVTEEDQGRICVVIDLDE .::. :.:::.::.:.:::::::::::::::::::::::::::::..::::::::::::: gi|126 SQSGCSNELASYKDETNTIAKSDLLQCLQYQFYQIPGTCLLPEVTQQDQGRICVVIDLDE 100 110 120 130 140 150 120 130 140 150 160 170 sj0632 TLVHSSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYA ::::::::::::::::::.:::: :::::::::::::::::::::::::::::::::::: gi|126 TLVHSSFKPINNADFIVPVEIEGITHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYA 160 170 180 190 200 210 180 190 200 210 220 230 sj0632 DPVTDLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENA ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 DPVTDLLDQCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENA 220 230 240 250 260 270 240 250 260 270 sj0632 VPVQSWFDDMADTELLNLIPIFEELSGAEDVYTSLGQLRAP :::::::::::::::::::::::::: :::::::::::::: gi|126 VPVQSWFDDMADTELLNLIPIFEELSEAEDVYTSLGQLRAP 280 290 300 310 >>gi|119617494|gb|EAW97088.1| CTD (carboxy-terminal doma (260 aa) initn: 993 init1: 993 opt: 1518 Z-score: 2001.2 bits: 378.0 E(): 1e-102 Smith-Waterman score: 1518; 97.468% identity (97.468% similar) in 237 aa overlap (1-231:1-237) 10 20 30 40 50 60 sj0632 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MEHGSIITQARREDALVLTKQGLVSKSSPKKPRGRNIFKALFCCFRAQHVGQSSSSTELA 10 20 30 40 50 60 70 80 90 100 110 sj0632 AYKEEANTIAKSDLLQCLQYQFYQ------IPGTCLLPEVTEEDQGRICVVIDLDETLVH :::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|119 AYKEEANTIAKSDLLQCLQYQFYQVRDSGLIPGTCLLPEVTEEDQGRICVVIDLDETLVH 70 80 90 100 110 120 120 130 140 150 160 170 sj0632 SSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEFLRRMGELFECVLFTASLAKYADPVT 130 140 150 160 170 180 180 190 200 210 220 230 sj0632 DLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVPVQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLILDNSPASYIFHPENAVSAP 190 200 210 220 230 240 240 250 260 270 sj0632 SWFDDMADTELLNLIPIFEELSGAEDVYTSLGQLRAP gi|119 DASPRCLCSPGLMTWQTLSC 250 260 271 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 18:47:10 2009 done: Thu Jun 18 18:50:41 2009 Total Scan time: 936.520 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]