hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-18570996/chunk_1/iprscan-20090618-18570996.nocrc
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Query sequence: sj06448
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01391.8.ls Collagen triple helix repeat (20 copies)      1113.2          0  18
PF01391.8.fs Collagen triple helix repeat (20 copies)      1087.8          0  18
PF01410.8.fs Fibrillar collagen C-terminal domain           568.8   6.1e-230   1
PF01410.8.ls Fibrillar collagen C-terminal domain           570.7   1.3e-168   1
PF00093.8.fs von Willebrand factor type C domain             88.0    1.2e-24   1
PF08949.1.fs Domain of unknown function (DUF1860)            26.4      3e-09  12

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00093.8.fs   1/1      43    98 ..     1    84 []    88.0  1.2e-24
PF01391.8.ls   1/18    110   168 ..     1    60 []    26.8  8.8e-06
PF01391.8.fs   1/18    112   161 ..     1    50 [.    27.3  1.5e-06
PF01391.8.ls   2/18    180   238 ..     1    60 []    51.4  2.8e-12
PF01391.8.fs   2/18    180   238 ..     1    60 []    50.4  1.1e-12
PF01391.8.ls   3/18    239   298 ..     1    60 []    77.7  3.3e-20
PF01391.8.fs   3/18    239   298 ..     1    60 []    75.7  1.3e-19
PF01391.8.ls   4/18    299   358 ..     1    60 []    66.9    6e-17
PF01391.8.fs   4/18    299   358 ..     1    60 []    64.9  1.5e-16
PF01391.8.ls   5/18    359   418 ..     1    60 []    63.6  5.9e-16
PF01391.8.fs   5/18    359   418 ..     1    60 []    61.6  1.1e-15
PF01391.8.ls   6/18    419   478 ..     1    60 []    63.1  8.2e-16
PF01391.8.fs   6/18    419   478 ..     1    60 []    61.1  1.5e-15
PF01391.8.ls   7/18    479   538 ..     1    60 []    65.9  1.2e-16
PF01391.8.fs   7/18    479   538 ..     1    60 []    63.9  2.7e-16
PF01391.8.ls   8/18    539   598 ..     1    60 []    66.6  7.4e-17
PF01391.8.fs   8/18    539   598 ..     1    60 []    64.6  1.8e-16
PF01391.8.ls   9/18    599   658 ..     1    60 []    64.1  4.2e-16
PF01391.8.fs   9/18    599   658 ..     1    60 []    62.1  8.3e-16
PF01391.8.ls  10/18    659   718 ..     1    60 []    62.6  1.2e-15
PF01391.8.fs  10/18    659   718 ..     1    60 []    60.6  2.1e-15
PF01391.8.fs  11/18    719   778 ..     1    60 []    70.2  5.9e-18
PF01391.8.ls  11/18    719   778 ..     1    60 []    72.2  1.5e-18
PF01391.8.ls  12/18    782   841 ..     1    60 []    70.3  5.5e-18
PF01391.8.fs  12/18    782   841 ..     1    60 []    68.4  1.8e-17
PF01391.8.fs  13/18    842   901 ..     1    60 []    60.5  2.3e-15
PF01391.8.ls  13/18    842   901 ..     1    60 []    62.4  1.3e-15
PF01391.8.ls  14/18    902   961 ..     1    60 []    61.2  3.2e-15
PF01391.8.fs  14/18    902   961 ..     1    60 []    59.2    5e-15
PF01391.8.ls  15/18    962  1021 ..     1    60 []    64.6  2.9e-16
PF01391.8.fs  15/18    962  1021 ..     1    60 []    62.7    6e-16
PF01391.8.ls  16/18   1022  1081 ..     1    60 []    62.1  1.7e-15
PF01391.8.fs  16/18   1022  1081 ..     1    60 []    60.1  2.9e-15
PF01391.8.ls  17/18   1082  1141 ..     1    60 []    75.9  1.2e-19
PF01391.8.fs  17/18   1082  1141 ..     1    60 []    73.9  4.8e-19
PF01391.8.fs  18/18   1142  1195 ..     1    54 [.    40.5  4.6e-10
PF01391.8.ls  18/18   1142  1201 ..     1    60 []    35.6  1.6e-07
PF01410.8.fs   1/1    1248  1466 ..     1   226 []   568.8 6.1e-230
PF01410.8.ls   1/1    1248  1466 ..     1   226 []   570.7 1.3e-168

Alignments of top-scoring domains:
PF00093.8.fs: domain 1 of 1, from 43 to 98: score 88.0, E = 1.2e-24
                   *->CvqnGvvYengetWkpdsqPnGvdkCtyiCtCddiedavrlggkvlC
                      CvqnG +Y+++++Wkp++       C+ iC+Cd+        gkvlC
     sj06448    43    CVQNGLRYHDRDVWKPEP-------CR-ICVCDN--------GKVLC 73   

                   dkitCppelLpsldCpnprrvdalvippGECCpewvC<-*
                   d+++C+++     +Cp +      + p+GECCp  vC   
     sj06448    74 DDVICDET----KNCPGA------EVPEGECCP--VC    98   

PF01391.8.ls: domain 1 of 18, from 110 to 168: score 26.8, E = 8.8e-06
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                         G  Gp+G++Gp+Gp+Gp+Gp+G  G pG pG pGpPGppGppGp
     sj06448   110    -TTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGP 155  

                   pGppGapGapGpp<-*
                   pG  G+  +       
     sj06448   156 PGLGGNFAPQLSY    168  

PF01391.8.fs: domain 1 of 18, from 112 to 161: score 27.3, E = 1.5e-06
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G  Gp G  Gp+Gp+Gp+GppG +G pG pG pG+pGpPGppGppG 
     sj06448   112    GVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGL 158  

                   pGp<-*
                    G+   
     sj06448   159 GGN    161  

PF01391.8.ls: domain 2 of 18, from 180 to 238: score 51.4, E = 2.8e-12
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                        pGp+Gp Gp+G pGppG+pGp+G++GppG pGepG+ Gp Gp Gp
     sj06448   180    -VPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGP 225  

                   pGppGapGapGpp<-*
                   pGppG+ G+ G++   
     sj06448   226 PGPPGKNGDDGEA    238  

PF01391.8.fs: domain 2 of 18, from 180 to 238: score 50.4, E = 1.1e-12
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                        pGp+Gp Gp+G pGppG+pGp+G++GppG pGepG+ Gp Gp Gp
     sj06448   180    -VPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGP 225  

                   pGppGapGapGpp<-*
                   pGppG+ G+ G++   
     sj06448   226 PGPPGKNGDDGEA    238  

PF01391.8.ls: domain 3 of 18, from 239 to 298: score 77.7, E = 3.3e-20
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+pG+pG++GppGp G++G pG aG pG++G++G++G +G++G +Gp
     sj06448   239    GKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGP 285  

                   pGppGapGapGpp<-*
                   +Gp+G+pG+pG++   
     sj06448   286 AGPKGEPGSPGEN    298  

PF01391.8.fs: domain 3 of 18, from 239 to 298: score 75.7, E = 1.3e-19
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+pG+pG++GppGp G++G pG aG pG++G++G++G +G++G +Gp
     sj06448   239    GKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGP 285  

                   pGppGapGapGpp<-*
                   +Gp+G+pG+pG++   
     sj06448   286 AGPKGEPGSPGEN    298  

PF01391.8.ls: domain 4 of 18, from 299 to 358: score 66.9, E = 6e-17
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+pG++Gp+G+pG++G+pG+pGpaGa+G+ G+ G++GpPGp Gp+Gp
     sj06448   299    GAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGP 345  

                   pGppGapGapGpp<-*
                   pG pGa Ga+G++   
     sj06448   346 PGFPGAVGAKGEA    358  

PF01391.8.fs: domain 4 of 18, from 299 to 358: score 64.9, E = 1.5e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+pG++Gp+G+pG++G+pG+pGpaGa+G+ G+ G++GpPGp Gp+Gp
     sj06448   299    GAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGP 345  

                   pGppGapGapGpp<-*
                   pG pGa Ga+G++   
     sj06448   346 PGFPGAVGAKGEA    358  

PF01391.8.ls: domain 5 of 18, from 359 to 418: score 63.6, E = 5.9e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp Gp+G+ Gp+G +G+pGppGpaGa+Gp+G+pG++G+PG++G++G+
     sj06448   359    GPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGA 405  

                   pGppGapGapGpp<-*
                   pG +GapG pG++   
     sj06448   406 PGIAGAPGFPGAR    418  

PF01391.8.fs: domain 5 of 18, from 359 to 418: score 61.6, E = 1.1e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp Gp+G+ Gp+G +G+pGppGpaGa+Gp+G+pG++G+PG++G++G+
     sj06448   359    GPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGA 405  

                   pGppGapGapGpp<-*
                   pG +GapG pG++   
     sj06448   406 PGIAGAPGFPGAR    418  

PF01391.8.ls: domain 6 of 18, from 419 to 478: score 63.1, E = 8.2e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp Gp+Gp GppGp+G++G+pG++G++G+ G++GepGp G +GppGp
     sj06448   419    GPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGP 465  

                   pGppGapGapGpp<-*
                   +G++G+ Ga G+p   
     sj06448   466 AGEEGKRGARGEP    478  

PF01391.8.fs: domain 6 of 18, from 419 to 478: score 61.1, E = 1.5e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp Gp+Gp GppGp+G++G+pG++G++G+ G++GepGp G +GppGp
     sj06448   419    GPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGP 465  

                   pGppGapGapGpp<-*
                   +G++G+ Ga G+p   
     sj06448   466 AGEEGKRGARGEP    478  

PF01391.8.ls: domain 7 of 18, from 479 to 538: score 65.9, E = 1.2e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp G+pGppG++G pG +G+pG++G +Gp+Gp+Ge+G+PGp+Gp G+
     sj06448   479    GPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGS 525  

                   pGppGapGapGpp<-*
                   pG++G+pG++G p   
     sj06448   526 PGEAGRPGEAGLP    538  

PF01391.8.fs: domain 7 of 18, from 479 to 538: score 63.9, E = 2.7e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp G+pGppG++G pG +G+pG++G +Gp+Gp+Ge+G+PGp+Gp G+
     sj06448   479    GPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGS 525  

                   pGppGapGapGpp<-*
                   pG++G+pG++G p   
     sj06448   526 PGEAGRPGEAGLP    538  

PF01391.8.ls: domain 8 of 18, from 539 to 598: score 66.6, E = 7.4e-17
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G++G+ G+pG pGp+G+ GppGpaG  G pGppG+pG+ G++G++G+
     sj06448   539    GAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGF 585  

                   pGppGapGapGpp<-*
                   pGp+Ga+G+pG++   
     sj06448   586 PGPKGAAGEPGKA    598  

PF01391.8.fs: domain 8 of 18, from 539 to 598: score 64.6, E = 1.8e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G++G+ G+pG pGp+G+ GppGpaG  G pGppG+pG+ G++G++G+
     sj06448   539    GAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGF 585  

                   pGppGapGapGpp<-*
                   pGp+Ga+G+pG++   
     sj06448   586 PGPKGAAGEPGKA    598  

PF01391.8.ls: domain 9 of 18, from 599 to 658: score 64.1, E = 4.2e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G++G pGppG+ Gp+G+ G++G++G+pGp+Gp+Ge+G++Gp+G pG+
     sj06448   599    GERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF 645  

                   pGppGapGapGpp<-*
                   +G pG++G+pG++   
     sj06448   646 QGLPGPAGPPGEA    658  

PF01391.8.fs: domain 9 of 18, from 599 to 658: score 62.1, E = 8.3e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G++G pGppG+ Gp+G+ G++G++G+pGp+Gp+Ge+G++Gp+G pG+
     sj06448   599    GERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGF 645  

                   pGppGapGapGpp<-*
                   +G pG++G+pG++   
     sj06448   646 QGLPGPAGPPGEA    658  

PF01391.8.ls: domain 10 of 18, from 659 to 718: score 62.6, E = 1.2e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+pG++G pG+ G+pGp+G+ G++G+pG++G +G+pGp Gp+G++G+
     sj06448   659    GKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGA 705  

                   pGppGapGapGpp<-*
                   pG++Ga+G++G+p   
     sj06448   706 PGNDGAKGDAGAP    718  

PF01391.8.fs: domain 10 of 18, from 659 to 718: score 60.6, E = 2.1e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+pG++G pG+ G+pGp+G+ G++G+pG++G +G+pGp Gp+G++G+
     sj06448   659    GKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGA 705  

                   pGppGapGapGpp<-*
                   pG++Ga+G++G+p   
     sj06448   706 PGNDGAKGDAGAP    718  

PF01391.8.fs: domain 11 of 18, from 719 to 778: score 70.2, E = 5.9e-18
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+pG++G+pG++G+pG++G++G +G++G++G++G++G++G+pG++G 
     sj06448   719    GAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGV 765  

                   pGppGapGapGpp<-*
                   +G +G++G+pGp+   
     sj06448   766 RGLTGPIGPPGPA    778  

PF01391.8.ls: domain 11 of 18, from 719 to 778: score 72.2, E = 1.5e-18
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+pG++G+pG++G+pG++G++G +G++G++G++G++G++G+pG++G 
     sj06448   719    GAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGV 765  

                   pGppGapGapGpp<-*
                   +G +G++G+pGp+   
     sj06448   766 RGLTGPIGPPGPA    778  

PF01391.8.ls: domain 12 of 18, from 782 to 841: score 70.3, E = 5.5e-18
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G +G+ Gp Gp+Gp+G++G+pG++G+pGppGp+G++GpPG++G+pG+
     sj06448   782    GDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGA 828  

                   pGppGapGapGpp<-*
                   +G+pG +Ga+G +   
     sj06448   829 KGEPGDAGAKGDA    841  

PF01391.8.fs: domain 12 of 18, from 782 to 841: score 68.4, E = 1.8e-17
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G +G+ Gp Gp+Gp+G++G+pG++G+pGppGp+G++GpPG++G+pG+
     sj06448   782    GDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGA 828  

                   pGppGapGapGpp<-*
                   +G+pG +Ga+G +   
     sj06448   829 KGEPGDAGAKGDA    841  

PF01391.8.fs: domain 13 of 18, from 842 to 901: score 60.5, E = 2.3e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      GppGp+Gp+GppGp G+ G+pG++Ga+G++GppG+ G+PG++G+ Gp
     sj06448   842    GPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGP 888  

                   pGppGapGapGpp<-*
                   pGp G++G+pGpp   
     sj06448   889 PGPSGNAGPPGPP    901  

PF01391.8.ls: domain 13 of 18, from 842 to 901: score 62.4, E = 1.3e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      GppGp+Gp+GppGp G+ G+pG++Ga+G++GppG+ G+PG++G+ Gp
     sj06448   842    GPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGP 888  

                   pGppGapGapGpp<-*
                   pGp G++G+pGpp   
     sj06448   889 PGPSGNAGPPGPP    901  

PF01391.8.ls: domain 14 of 18, from 902 to 961: score 61.2, E = 3.2e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp+G+ G++Gp+G++Gp+G pG+ G+pGppGp+Ge+G+PG++Gp+G+
     sj06448   902    GPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGA 948  

                   pGppGapGapGpp<-*
                   pG pG+ G +G++   
     sj06448   949 PGTPGPQGIAGQR    961  

PF01391.8.fs: domain 14 of 18, from 902 to 961: score 59.2, E = 5e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp+G+ G++Gp+G++Gp+G pG+ G+pGppGp+Ge+G+PG++Gp+G+
     sj06448   902    GPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGA 948  

                   pGppGapGapGpp<-*
                   pG pG+ G +G++   
     sj06448   949 PGTPGPQGIAGQR    961  

PF01391.8.ls: domain 15 of 18, from 962 to 1021: score 64.6, E = 2.9e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G  G+pG +G++G pG pGp G++G++Gp G++Ge+GpPGp GppG 
     sj06448   962    GVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGL 1008 

                   pGppGapGapGpp<-*
                   +GppG++G +G+p   
     sj06448  1009 AGPPGESGREGAP    1021 

PF01391.8.fs: domain 15 of 18, from 962 to 1021: score 62.7, E = 6e-16
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G  G+pG +G++G pG pGp G++G++Gp G++Ge+GpPGp GppG 
     sj06448   962    GVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGL 1008 

                   pGppGapGapGpp<-*
                   +GppG++G +G+p   
     sj06448  1009 AGPPGESGREGAP    1021 

PF01391.8.ls: domain 16 of 18, from 1022 to 1081: score 62.1, E = 1.7e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+ G+pG+ G pG++G++G++GpaG+pG pG+pG+pGp Gp+G+ G 
     sj06448  1022    GAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGD 1068 

                   pGppGapGapGpp<-*
                   +G++G++G++Gp+   
     sj06448  1069 RGETGPAGPAGPV    1081 

PF01391.8.fs: domain 16 of 18, from 1022 to 1081: score 60.1, E = 2.9e-15
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      G+ G+pG+ G pG++G++G++GpaG+pG pG+pG+pGp Gp+G+ G 
     sj06448  1022    GAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGD 1068 

                   pGppGapGapGpp<-*
                   +G++G++G++Gp+   
     sj06448  1069 RGETGPAGPAGPV    1081 

PF01391.8.ls: domain 17 of 18, from 1082 to 1141: score 75.9, E = 1.2e-19
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp G +Gp+Gp+Gp+G++G++G++G +G +G++G++G +GppGppG+
     sj06448  1082    GPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGS 1128 

                   pGppGapGapGpp<-*
                   pG++G++Ga Gp+   
     sj06448  1129 PGEQGPSGASGPA    1141 

PF01391.8.fs: domain 17 of 18, from 1082 to 1141: score 73.9, E = 4.8e-19
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp G +Gp+Gp+Gp+G++G++G++G +G +G++G++G +GppGppG+
     sj06448  1082    GPVGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGS 1128 

                   pGppGapGapGpp<-*
                   pG++G++Ga Gp+   
     sj06448  1129 PGEQGPSGASGPA    1141 

PF01391.8.fs: domain 18 of 18, from 1142 to 1195: score 40.5, E = 4.6e-10
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp+GppG++G+pG +G  G pGp G+pGp+G  G++Gp GppGppGp
     sj06448  1142    GPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGP 1188 

                   pGppGap<-*
                   pGppG+p   
     sj06448  1189 PGPPGPP    1195 

PF01391.8.ls: domain 18 of 18, from 1142 to 1201: score 35.6, E = 1.6e-07
                   *->GppGppGppGppGppGppGppGpaGapGppGppGepGpPGppGppGp
                      Gp+GppG++G+pG +G  G pGp G+pGp+G  G++Gp GppGppGp
     sj06448  1142    GPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGP 1188 

                   pGppGapGapGpp<-*
                   pGppG+p a       
     sj06448  1189 PGPPGPPSAGFDF    1201 

PF01410.8.fs: domain 1 of 1, from 1248 to 1466: score 568.8, E = 6.1e-230
                   *->lksPeGksrknPARtCkDLfLchpefksGeYWiDPNqGCikDAikVf
                      ++sPeG srknPARtC+DL++ch+++ksGeYWiDPNqGC++DAikVf
     sj06448  1248    IRSPEG-SRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDAIKVF 1293 

                   CnkrfetGvgeTCisptpksvpkRiksWykgks.kdkKhvWFgetmegGf
                   Cn  +etG  eTC++pt+ sv++  k+Wy +k++kdk+hvWFge+m++Gf
     sj06448  1294 CN--METG--ETCVYPTQPSVAQ--KNWYISKNpKDKRHVWFGESMTDGF 1337 

                   kfsYiddelnpeisnvQlTFLRLLSteAsQNiTYhCKNSvAYmDeatGNl
                   +f+Y++++++p+++++QlTFLRL+SteAsQNiTYhCKNSvAYmD++tGNl
     sj06448  1338 QFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNL 1387 

                   kkAlilmgSnDvElsadgnskFtYtvlGeDGCssrtgewgKTViEyeTkK
                   kkAl+l+gSn++E++a+gns+FtY+v+ +DGC+s+tg+wgKTViEy+T+K
     sj06448  1388 KKALLLQGSNEIEIRAEGNSRFTYSVT-VDGCTSHTGAWGKTVIEYKTTK 1436 

                   ttRLPIvDiApsDiGgedQeFGveiGPVCF<-*
                   t+RLPI+D+Ap+D+G +dQeFG+++GPVCF   
     sj06448  1437 TSRLPIIDVAPLDVGAPDQEFGFDVGPVCF    1466 

PF01410.8.ls: domain 1 of 1, from 1248 to 1466: score 570.7, E = 1.3e-168
                   *->lksPeGksrknPARtCkDLfLchpefksGeYWiDPNqGCikDAikVf
                      ++sPeG srknPARtC+DL++ch+++ksGeYWiDPNqGC++DAikVf
     sj06448  1248    IRSPEG-SRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDAIKVF 1293 

                   CnkrfetGvgeTCisptpksvpkRiksWykgks.kdkKhvWFgetmegGf
                   Cn  +etG  eTC++pt+ sv++  k+Wy +k++kdk+hvWFge+m++Gf
     sj06448  1294 CN--METG--ETCVYPTQPSVAQ--KNWYISKNpKDKRHVWFGESMTDGF 1337 

                   kfsYiddelnpeisnvQlTFLRLLSteAsQNiTYhCKNSvAYmDeatGNl
                   +f+Y++++++p+++++QlTFLRL+SteAsQNiTYhCKNSvAYmD++tGNl
     sj06448  1338 QFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNL 1387 

                   kkAlilmgSnDvElsadgnskFtYtvlGeDGCssrtgewgKTViEyeTkK
                   kkAl+l+gSn++E++a+gns+FtY+v+ +DGC+s+tg+wgKTViEy+T+K
     sj06448  1388 KKALLLQGSNEIEIRAEGNSRFTYSVT-VDGCTSHTGAWGKTVIEYKTTK 1436 

                   ttRLPIvDiApsDiGgedQeFGveiGPVCF<-*
                   t+RLPI+D+Ap+D+G +dQeFG+++GPVCF   
     sj06448  1437 TSRLPIIDVAPLDVGAPDQEFGFDVGPVCF    1466 

//