hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20090618/iprscan-20090618-19095450/chunk_1/iprscan-20090618-19095450.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: sj09815 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00388.9.ls Phosphatidylinositol-specific phospholipase 328.2 1.3e-95 1 PF00388.9.fs Phosphatidylinositol-specific phospholipase 326.2 5.2e-95 1 PF00017.14.fs SH2 domain 234.5 9.4e-80 2 PF00017.14.ls SH2 domain 238.4 1.4e-68 2 PF00387.9.ls Phosphatidylinositol-specific phospholipase 149.8 6.6e-42 1 PF00387.9.fs Phosphatidylinositol-specific phospholipase 147.9 2.5e-41 1 PF00168.20.fs C2 domain 81.3 1.3e-23 1 PF00018.18.ls SH3 domain 85.4 1.6e-22 1 PF00018.18.fs SH3 domain 83.4 4.7e-22 1 PF00168.20.ls C2 domain 83.3 7e-22 1 PF00169.19.fs PH domain 40.4 7.8e-12 3 PF00169.19.ls PH domain 25.2 0.00022 1 PF07653.7.ls Variant SH3 domain 21.9 0.0014 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00169.19.ls 1/1 35 144 .. 1 92 [] 25.2 0.00022 PF00169.19.fs 1/3 35 144 .. 1 92 [] 23.2 1.4e-06 PF00388.9.ls 1/1 326 470 .. 1 153 [] 328.2 1.3e-95 PF00388.9.fs 1/1 326 470 .. 1 153 [] 326.2 5.2e-95 PF00017.14.fs 1/2 545 630 .. 1 82 [] 127.6 3.4e-43 PF00017.14.ls 1/2 545 630 .. 1 82 [] 129.6 8.2e-36 PF00017.14.ls 2/2 659 733 .. 1 82 [] 108.8 1.4e-29 PF00017.14.fs 2/2 659 733 .. 1 82 [] 106.9 4.1e-36 PF00018.18.ls 1/1 785 840 .. 1 59 [] 85.4 1.6e-22 PF00018.18.fs 1/1 785 840 .. 1 59 [] 83.4 4.7e-22 PF07653.7.ls 1/1 786 840 .. 1 69 [] 21.9 0.0014 PF00387.9.ls 1/1 942 1057 .. 1 128 [] 149.8 6.6e-42 PF00387.9.fs 1/1 942 1057 .. 1 128 [] 147.9 2.5e-41 PF00168.20.fs 1/1 1076 1165 .. 1 88 [] 81.3 1.3e-23 PF00168.20.ls 1/1 1076 1165 .. 1 88 [] 83.3 7e-22 Alignments of top-scoring domains: PF00169.19.ls: domain 1 of 1, from 35 to 144: score 25.2, E = 0.00022 *->vikeGwLlkkg...gkkswkkRyfvLfddvLlyykdkkkkpkgsipL ++ +++ + +++ ++++ + ++ +++ + k +k g +++ sj09815 35 LELGTVMTVFSfrkSTPERRTVQVIMETRQVAWSKTA-DKIEGFLDI 80 sgi.qvtkvpdn...........krkncFeirt.dr...etlllqaesee +i+++++ +++++ ++ + ++k+++cF i +++ tl l+a+s+e sj09815 81 MEIkEIRPGKNSkdferakavrqKEDCCFTILYgTQfvlSTLSLAADSKE 130 erkeWvkaiqsair<-* ++ W++ ++ ++ sj09815 131 DAVNWLSGLKILHQ 144 PF00169.19.fs: domain 1 of 3, from 35 to 144: score 23.2, E = 1.4e-06 *->vikeGwLlkkg...gkkswkkRyfvLfddvLlyykdkkkkpkgsipL ++ +++ + +++ ++++ + ++ +++ + k +k g +++ sj09815 35 LELGTVMTVFSfrkSTPERRTVQVIMETRQVAWSKTA-DKIEGFLDI 80 sgi.qvtkvpdn...........krkncFeirt.dr...etlllqaesee +i+++++ +++++ ++ + ++k+++cF i +++ tl l+a+s+e sj09815 81 MEIkEIRPGKNSkdferakavrqKEDCCFTILYgTQfvlSTLSLAADSKE 130 erkeWvkaiqsair<-* ++ W++ ++ ++ sj09815 131 DAVNWLSGLKILHQ 144 PF00388.9.ls: domain 1 of 1, from 326 to 470: score 328.2, E = 1.3e-95 *->dmsiPLsHYfisSshntYLtgkQlwGkssvesYrqqLdaGcRcvELD dm++PLsHY+isSshntYLtg+Ql+++ss e+Y+++L++GcRc+ELD sj09815 326 DMNNPLSHYWISSSHNTYLTGDQLRSESSPEAYIRCLRMGCRCIELD 372 cwdGkpddepiIyHGhtltleiklkdVleaIkdfafkPtSpyPvIlSlen cwdG pd++p+IyHG+t t++ik++dV++aIkd+af+ tS++PvIlS+e+ sj09815 373 CWDG-PDGKPVIYHGWTRTTKIKFDDVVQAIKDHAFV-TSSFPVILSIEE 420 HcnsddqQrkmakyfkeiFgdmLltkPtldslttepglpLPslkdlrgKI Hc+++ qQr+mak fke+Fgd LltkP ++ +++ LPs+ +lr+KI sj09815 421 HCSVE-QQRHMAKAFKEVFGDLLLTKP-TEASADQ----LPSPSQLREKI 464 LLknkk<-* ++k+kk sj09815 465 IIKHKK 470 PF00388.9.fs: domain 1 of 1, from 326 to 470: score 326.2, E = 5.2e-95 *->dmsiPLsHYfisSshntYLtgkQlwGkssvesYrqqLdaGcRcvELD dm++PLsHY+isSshntYLtg+Ql+++ss e+Y+++L++GcRc+ELD sj09815 326 DMNNPLSHYWISSSHNTYLTGDQLRSESSPEAYIRCLRMGCRCIELD 372 cwdGkpddepiIyHGhtltleiklkdVleaIkdfafkPtSpyPvIlSlen cwdG pd++p+IyHG+t t++ik++dV++aIkd+af+ tS++PvIlS+e+ sj09815 373 CWDG-PDGKPVIYHGWTRTTKIKFDDVVQAIKDHAFV-TSSFPVILSIEE 420 HcnsddqQrkmakyfkeiFgdmLltkPtldslttepglpLPslkdlrgKI Hc+++ qQr+mak fke+Fgd LltkP ++ +++ LPs+ +lr+KI sj09815 421 HCSVE-QQRHMAKAFKEVFGDLLLTKP-TEASADQ----LPSPSQLREKI 464 LLknkk<-* ++k+kk sj09815 465 IIKHKK 470 PF00017.14.fs: domain 1 of 2, from 545 to 630: score 127.6, E = 3.4e-43 *->WyhGkIsR.keAErlLlnp....ggkdGtFLvReSestpGdYtLSVr W+h+k+ ++ AE+lL+++ ++ggkdGtFLvReSe+ p+dYtLS++ sj09815 545 WFHKKVEKrTSAEKLLQEYcmetGGKDGTFLVRESETFPNDYTLSFW 591 ddgpqgdrVkHyrIqsldng...gyyitggvkFssLpeLvehY<-* + g rV+H+rI+s+ +g++ +yy+t++ +Fss++ L++hY sj09815 592 RSG----RVQHCRIRSTMEGgtlKYYLTDNLTFSSIYALIQHY 630 PF00017.14.ls: domain 1 of 2, from 545 to 630: score 129.6, E = 8.2e-36 *->WyhGkIsR.keAErlLlnp....ggkdGtFLvReSestpGdYtLSVr W+h+k+ ++ AE+lL+++ ++ggkdGtFLvReSe+ p+dYtLS++ sj09815 545 WFHKKVEKrTSAEKLLQEYcmetGGKDGTFLVRESETFPNDYTLSFW 591 ddgpqgdrVkHyrIqsldng...gyyitggvkFssLpeLvehY<-* + g rV+H+rI+s+ +g++ +yy+t++ +Fss++ L++hY sj09815 592 RSG----RVQHCRIRSTMEGgtlKYYLTDNLTFSSIYALIQHY 630 PF00017.14.ls: domain 2 of 2, from 659 to 733: score 108.8, E = 1.4e-29 *->WyhGkIsRkeAErlLlnpggkdGtFLvReSestpGdYtLSVrddgpq Wy+ ++sR eAE++L+ ++dG+FL+R++e + +Y++++r g sj09815 659 WYYDSLSRGEAEDMLMR-IPRDGAFLIRKREGSD-SYAITFRARG-- 701 gdrVkHyrIqsldnggyyitggvkFssLpeLvehY<-* +VkH+rI+++++ ++ +++ +F+sL eLv++Y sj09815 702 --KVKHCRINRDGR-HFVLGTSAYFESLVELVSYY 733 PF00017.14.fs: domain 2 of 2, from 659 to 733: score 106.9, E = 4.1e-36 *->WyhGkIsRkeAErlLlnpggkdGtFLvReSestpGdYtLSVrddgpq Wy+ ++sR eAE++L+ ++dG+FL+R++e + +Y++++r g sj09815 659 WYYDSLSRGEAEDMLMR-IPRDGAFLIRKREGSD-SYAITFRARG-- 701 gdrVkHyrIqsldnggyyitggvkFssLpeLvehY<-* +VkH+rI+++++ ++ +++ +F+sL eLv++Y sj09815 702 --KVKHCRINRDGR-HFVLGTSAYFESLVELVSYY 733 PF00018.18.ls: domain 1 of 1, from 785 to 840: score 85.4, E = 1.6e-22 *->kkvvALYDYearesdELsFkkGDvitvleksddpgWWkgrlkgtgGk ++v+ALYDY+a sdELsF +G i++++k+++ gWWkg + + sj09815 785 RTVKALYDYKAKRSDELSFCRGALIHNVSKEPG-GWWKGDYGT--RI 828 eGliPsNYVepv<-* + ++PsNYVe++ sj09815 829 QQYFPSNYVEDI 840 PF00018.18.fs: domain 1 of 1, from 785 to 840: score 83.4, E = 4.7e-22 *->kkvvALYDYearesdELsFkkGDvitvleksddpgWWkgrlkgtgGk ++v+ALYDY+a sdELsF +G i++++k+++ gWWkg + + sj09815 785 RTVKALYDYKAKRSDELSFCRGALIHNVSKEPG-GWWKGDYGT--RI 828 eGliPsNYVepv<-* + ++PsNYVe++ sj09815 829 QQYFPSNYVEDI 840 PF07653.7.ls: domain 1 of 1, from 786 to 840: score 21.9, E = 0.0014 *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidvggskdddgwwe ++a+ dy+a + +e Ls+++G +++ sk+++gww+ sj09815 786 TVKALYDYKA-KRSDE------LSFCRGALIHNV----SKEPGGWWK 821 geslggGrrrRGlvPssaveel<-* g+ g + ++Ps++ve + sj09815 822 GDY-GTRIQ--QYFPSNYVEDI 840 PF00387.9.ls: domain 1 of 1, from 942 to 1057: score 149.8, E = 6.6e-42 *->ElsnLvnYiqsikFrsFelsGeekntsyeisSFsErkvkakkllkes Els+Lv Y++++ + ++ e + ei SF+E+ ka + sj09815 942 ELSDLVVYCKPTS-KTKDNL--ENPDFREIRSFVET--KADSIIRQK 983 pvefVkyNkrqLsRvYPkGtRvDSSNfmPqvfWnaGCQmVALNfQTsDlp pv++ kyN++ L RvYPkG RvDSSN++P W G QmVALNfQT D sj09815 984 PVDLLKYNQKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKY 1033 mqiNdGmFeyNggqPdGsfksGYlLKPeflR<-* mq N ++F+ Ng+ +GY+L Pe +R sj09815 1034 MQMNHALFSLNGR-------TGYVLQPESMR 1057 PF00387.9.fs: domain 1 of 1, from 942 to 1057: score 147.9, E = 2.5e-41 *->ElsnLvnYiqsikFrsFelsGeekntsyeisSFsErkvkakkllkes Els+Lv Y++++ + ++ e + ei SF+E+ ka + sj09815 942 ELSDLVVYCKPTS-KTKDNL--ENPDFREIRSFVET--KADSIIRQK 983 pvefVkyNkrqLsRvYPkGtRvDSSNfmPqvfWnaGCQmVALNfQTsDlp pv++ kyN++ L RvYPkG RvDSSN++P W G QmVALNfQT D sj09815 984 PVDLLKYNQKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKY 1033 mqiNdGmFeyNggqPdGsfksGYlLKPeflR<-* mq N ++F+ Ng+ +GY+L Pe +R sj09815 1034 MQMNHALFSLNGR-------TGYVLQPESMR 1057 PF00168.20.fs: domain 1 of 1, from 1076 to 1165: score 81.3, E = 1.3e-23 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qkkkTkvikkt L+V+v+ A++Lp+ + + P+V+v++ g + d++k+kT v++++ sj09815 1076 LTVKVLGARHLPKLG--RSIACPFVEVEICGAEYDnNKFKTTVVNDN 1120 .lNPvWN...EtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* +l+P+W +++E+ tFe+ +p+l++ L++ Vy++d+f+ fl +++ sj09815 1121 gLSPIWAptqEKVTFEIYDPNLAF-LRFVVYEEDMFSDPNFLAHAT 1165 PF00168.20.ls: domain 1 of 1, from 1076 to 1165: score 83.3, E = 7e-22 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qkkkTkvikkt L+V+v+ A++Lp+ + + P+V+v++ g + d++k+kT v++++ sj09815 1076 LTVKVLGARHLPKLG--RSIACPFVEVEICGAEYDnNKFKTTVVNDN 1120 .lNPvWN...EtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* +l+P+W +++E+ tFe+ +p+l++ L++ Vy++d+f+ fl +++ sj09815 1121 gLSPIWAptqEKVTFEIYDPNLAF-LRFVVYEEDMFSDPNFLAHAT 1165 //