Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK00314
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB209988 |
|---|---|
| Product ID | ORK00314 |
| Clone name | ae00014 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | FASN |
| cDNA sequence | DNA sequence (8452 bp) Predicted protein sequence (2548 aa) |
|
HaloTag ORF Clone |
FHC00314
|
| Flexi ORF Clone | FXC00314 |
| Description | Fatty acid synthase (EC 2.3.1.85) [Includes: [Acyl-carrier-protein] S- acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S- malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-carrier-protein] r |
Length: 8452 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 804 bp |
|---|---|
| Genome contig ID | gi51511734r_77529504 |
| PolyA signal sequence (ATTAAA,-21) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 2548 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR014030 | 39 | 276 | PF00109 | Beta-ketoacyl synthase |
| IPR014031 | 280 | 397 | PF02801 | Beta-ketoacyl synthase | |
| IPR014043 | 530 | 847 | PF00698 | Acyl transferase | |
| IPR013217 | 1280 | 1379 | PF08242 | Methyltransferase type 12 | |
| IPR013149 | 1704 | 1853 | PF00107 | Alcohol dehydrogenase | |
| IPR002198 | 1922 | 2090 | PF00106 | Short-chain dehydrogenase/reductase SDR | |
| IPR006163 | 2162 | 2228 | PF00550 | Phosphopantetheine-binding | |
| IPR001031 | 2279 | 2538 | PF00975 | Thioesterase | |
| ProfileScan | IPR006163 | 2160 | 2216 | PS50075 | Phosphopantetheine-binding |
| ScanRegExp | IPR014030 | 189 | 205 | PS00606 | Beta-ketoacyl synthase |
| IPR006162 | 2188 | 2203 | PS00012 | Phosphopantetheine attachment site |
