Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK11782
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Accession No
Product ID ORK11782
Clone name bm02924
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol TPM3
cDNA sequence DNA sequence (2082 bp)
Predicted protein sequence (268 aa)
Flexi ORF Clone FXC11782
Description Tropomyosin alpha-3 chain (Tropomyosin-3)(Gamma-tropomyosin)(Tropomyosin-5)(hTM5)
Features of the cloned cDNA sequence

Length: 2082 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 1273 bp
Genome contig ID gi89161185r_152295466
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 268 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
CAH71267 7.6e-64 100.0 tropomyosin 3 [...
Homo sapiens
XP_001365720 1.2e-63 99.5 similar to Trop...
Monodelphis dom...
XP_001496152 1.5e-63 99.5 similar to trop...
Equus caballus
CAH93139 1.5e-63 99.5 hypothetical pr...
Pongo abelii
BAE87388 1.5e-63 99.5 unnamed protein...
Macaca fascicularis
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR000533 68 85 PR00194 Tropomyosin
IPR000533 104 124 PR00194 Tropomyosin
IPR000533 129 157 PR00194 Tropomyosin
IPR000533 159 182 PR00194 Tropomyosin
IPR000533 215 240 PR00194 Tropomyosin
HMMPfam IPR000533 32 268 PF00261 Tropomyosin
ScanRegExp IPR000533 216 224 PS00326 Tropomyosin
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