Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK11841
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK11841 |
| Clone name | pj01468 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | ZKSCAN5 |
| cDNA sequence | DNA sequence (3989 bp) Predicted protein sequence (841 aa) |
| Description | Zinc finger protein with KRAB and SCAN domains 5 (Zinc finger protein 95 homolog)(Zfp-95) |
Length: 3989 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 1209 bp |
|---|---|
| Genome contig ID | gi89161213f_98840073 |
| PolyA signal sequence (AATAAA,-20) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (128946 - 128995) |
----+----*----+----*----+----*----+----*----+----* |
Length: 841 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR007087 | 348 | 371 | PD000003 | Zinc finger |
| IPR007087 | 376 | 399 | PD000003 | Zinc finger | |
| IPR007087 | 432 | 454 | PD000003 | Zinc finger | |
| IPR007087 | 551 | 574 | PD000003 | Zinc finger | |
| IPR007087 | 579 | 602 | PD000003 | Zinc finger | |
| IPR007087 | 607 | 630 | PD000003 | Zinc finger | |
| IPR007087 | 635 | 658 | PD000003 | Zinc finger | |
| IPR007087 | 719 | 742 | PD000003 | Zinc finger | |
| IPR007087 | 775 | 798 | PD000003 | Zinc finger | |
| HMMPfam | IPR003309 | 46 | 141 | PF02023 | Transcriptional regulator SCAN |
| IPR001909 | 223 | 260 | PF01352 | KRAB box | |
| IPR007087 | 348 | 370 | PF00096 | Zinc finger | |
| IPR007087 | 376 | 398 | PF00096 | Zinc finger | |
| IPR007087 | 404 | 426 | PF00096 | Zinc finger | |
| IPR007087 | 432 | 454 | PF00096 | Zinc finger | |
| IPR007087 | 551 | 573 | PF00096 | Zinc finger | |
| IPR007087 | 579 | 601 | PF00096 | Zinc finger | |
| IPR007087 | 607 | 629 | PF00096 | Zinc finger | |
| IPR007087 | 635 | 657 | PF00096 | Zinc finger | |
| IPR007087 | 663 | 685 | PF00096 | Zinc finger | |
| IPR007087 | 719 | 741 | PF00096 | Zinc finger | |
| IPR007087 | 775 | 797 | PF00096 | Zinc finger | |
| IPR007087 | 803 | 825 | PF00096 | Zinc finger | |
| HMMSmart | IPR003309 | 48 | 157 | SM00431 | Transcriptional regulator SCAN |
| IPR001909 | 220 | 283 | SM00349 | KRAB box | |
| IPR015880 | 348 | 370 | SM00355 | Zinc finger | |
| IPR015880 | 376 | 398 | SM00355 | Zinc finger | |
| IPR015880 | 404 | 426 | SM00355 | Zinc finger | |
| IPR015880 | 432 | 454 | SM00355 | Zinc finger | |
| IPR015880 | 551 | 573 | SM00355 | Zinc finger | |
| IPR015880 | 579 | 601 | SM00355 | Zinc finger | |
| IPR015880 | 607 | 629 | SM00355 | Zinc finger | |
| IPR015880 | 635 | 657 | SM00355 | Zinc finger | |
| IPR015880 | 663 | 685 | SM00355 | Zinc finger | |
| IPR015880 | 719 | 741 | SM00355 | Zinc finger | |
| IPR015880 | 775 | 797 | SM00355 | Zinc finger | |
| IPR015880 | 803 | 825 | SM00355 | Zinc finger | |
| ProfileScan | IPR003309 | 53 | 134 | PS50804 | Transcriptional regulator SCAN |
| IPR001909 | 220 | 293 | PS50805 | KRAB box | |
| IPR007087 | 348 | 375 | PS50157 | Zinc finger | |
| IPR007087 | 376 | 403 | PS50157 | Zinc finger | |
| IPR007087 | 404 | 431 | PS50157 | Zinc finger | |
| IPR007087 | 432 | 459 | PS50157 | Zinc finger | |
| IPR007087 | 551 | 578 | PS50157 | Zinc finger | |
| IPR007087 | 579 | 606 | PS50157 | Zinc finger | |
| IPR007087 | 607 | 634 | PS50157 | Zinc finger | |
| IPR007087 | 635 | 662 | PS50157 | Zinc finger | |
| IPR007087 | 663 | 690 | PS50157 | Zinc finger | |
| IPR007087 | 719 | 746 | PS50157 | Zinc finger | |
| IPR007087 | 747 | 774 | PS50157 | Zinc finger | |
| IPR007087 | 775 | 802 | PS50157 | Zinc finger | |
| IPR007087 | 803 | 830 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 350 | 370 | PS00028 | Zinc finger |
| IPR007087 | 378 | 398 | PS00028 | Zinc finger | |
| IPR007087 | 406 | 426 | PS00028 | Zinc finger | |
| IPR007087 | 434 | 454 | PS00028 | Zinc finger | |
| IPR007087 | 553 | 573 | PS00028 | Zinc finger | |
| IPR007087 | 581 | 601 | PS00028 | Zinc finger | |
| IPR007087 | 609 | 629 | PS00028 | Zinc finger | |
| IPR007087 | 637 | 657 | PS00028 | Zinc finger | |
| IPR007087 | 665 | 685 | PS00028 | Zinc finger | |
| IPR007087 | 721 | 741 | PS00028 | Zinc finger | |
| IPR007087 | 777 | 797 | PS00028 | Zinc finger | |
| IPR007087 | 805 | 825 | PS00028 | Zinc finger |
