Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK04933
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB208852 |
|---|---|
| Product ID | ORK04933 |
| Clone name | fj07688 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | F13A1 |
| cDNA sequence | DNA sequence (3808 bp) Predicted protein sequence (757 aa) |
| Description | Coagulation factor XIII A chain precursor (EC 2.3.2.13) (Coagulation factor XIIIa) (Protein-glutamine gamma-glutamyltransferase A chain) (Transglutaminase A chain). |
Length: 3808 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 1534 bp |
|---|---|
| Genome contig ID | gi89161210r_5989317 |
| PolyA signal sequence (AATAAA,-20) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 757 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR001102 | 71 | 192 | PF00868 | Transglutaminase |
| IPR002931 | 335 | 424 | PF01841 | Transglutaminase-like | |
| IPR008958 | 544 | 648 | PF00927 | Transglutaminase | |
| IPR008958 | 656 | 753 | PF00927 | Transglutaminase | |
| HMMSmart | IPR002931 | 332 | 425 | SM00460 | Transglutaminase-like |
| ScanRegExp | IPR013808 | 338 | 355 | PS00547 | Transglutaminase |
