Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01259
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK01259 |
| Clone name | fk16360 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | MTHFD1 |
| cDNA sequence | DNA sequence (3224 bp) Predicted protein sequence (990 aa) |
|
HaloTag ORF Clone |
FHC01259
|
| Flexi ORF Clone | FXC01259 |
| Description | C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF synthase) [Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)]. |
Length: 3224 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 250 bp |
|---|---|
| Genome contig ID | gi51511730f_63824733 |
| PolyA signal sequence (AATAAA,-22) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (171744 - 171793) |
----+----*----+----*----+----*----+----*----+----* |
Length: 990 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR000672 | 65 | 185 | PD002300 | Tetrahydrofolate dehydrogenase/cyclohydrolase |
| FPrintScan | IPR000672 | 91 | 113 | PR00085 | Tetrahydrofolate dehydrogenase/cyclohydrolase |
| IPR000672 | 132 | 159 | PR00085 | Tetrahydrofolate dehydrogenase/cyclohydrolase | |
| IPR000672 | 169 | 190 | PR00085 | Tetrahydrofolate dehydrogenase/cyclohydrolase | |
| IPR000672 | 216 | 236 | PR00085 | Tetrahydrofolate dehydrogenase/cyclohydrolase | |
| IPR000672 | 265 | 294 | PR00085 | Tetrahydrofolate dehydrogenase/cyclohydrolase | |
| IPR000672 | 306 | 322 | PR00085 | Tetrahydrofolate dehydrogenase/cyclohydrolase | |
| IPR000672 | 323 | 341 | PR00085 | Tetrahydrofolate dehydrogenase/cyclohydrolase | |
| HMMPfam | IPR000672 | 60 | 180 | PF00763 | Tetrahydrofolate dehydrogenase/cyclohydrolase |
| IPR000672 | 183 | 350 | PF02882 | Tetrahydrofolate dehydrogenase/cyclohydrolase | |
| IPR000559 | 371 | 990 | PF01268 | Formate-tetrahydrofolate ligase | |
| ScanRegExp | IPR000672 | 133 | 158 | PS00766 | Tetrahydrofolate dehydrogenase/cyclohydrolase |
| IPR000672 | 327 | 335 | PS00767 | Tetrahydrofolate dehydrogenase/cyclohydrolase | |
| IPR000559 | 474 | 484 | PS00721 | Formate-tetrahydrofolate ligase | |
| IPR000559 | 753 | 764 | PS00722 | Formate-tetrahydrofolate ligase |
