Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01564
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Accession No
Product ID ORK01564
Clone name ek00353
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol CTNNA1
cDNA sequence DNA sequence (3425 bp)
Predicted protein sequence (932 aa)
Flexi ORF Clone FXC01564
Description Catenin alpha-1 (Cadherin-associated protein) (Alpha E-catenin) (NY- REN-13 antigen).
Features of the cloned cDNA sequence

Length: 3425 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 625 bp
Genome contig ID gi51511721f_138017022
PolyA signal sequence
Flanking genome sequence
(281279 - 281328)

Features of the protein sequence

Length: 932 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
P35221 0 100.0 Catenin alpha-1...
Homo sapiens
XP_001172018 0 99.8 catenin, alpha ...
Pan troglodytes
BAA03530 0 99.7 alpha-catenin [...
Homo sapiens
P26231 0 99.4 Catenin alpha-1...
Mus musculus
XP_001504306 0 99.6 similar to Cate...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR001033 38 62 PR00805 Alpha-catenin
IPR001033 136 154 PR00805 Alpha-catenin
IPR001033 155 173 PR00805 Alpha-catenin
IPR001033 331 355 PR00805 Alpha-catenin
IPR001033 399 419 PR00805 Alpha-catenin
IPR001033 520 544 PR00805 Alpha-catenin
IPR001033 635 659 PR00805 Alpha-catenin
IPR006077 736 753 PR00806 Vinculin/alpha-catenin
IPR001033 737 759 PR00805 Alpha-catenin
IPR006077 773 788 PR00806 Vinculin/alpha-catenin
IPR006077 788 803 PR00806 Vinculin/alpha-catenin
IPR001033 801 825 PR00805 Alpha-catenin
IPR006077 807 828 PR00806 Vinculin/alpha-catenin
IPR006077 844 863 PR00806 Vinculin/alpha-catenin
IPR001033 881 899 PR00805 Alpha-catenin
HMMPfam IPR006077 45 893 PF01044 Vinculin/alpha-catenin
ScanRegExp IPR000633 204 224 PS00663 Vinculin
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