Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01679
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Accession No
Product ID ORK01679
Clone name hj06379s3
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol TRIM33
cDNA sequence DNA sequence (3424 bp)
Predicted protein sequence (1131 aa)
Flexi ORF Clone FXC01679
Description tripartite motif-containing 33
Features of the cloned cDNA sequence

Length: 3424 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 27 bp
Genome contig ID gi89161185r_114641766
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 1131 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q9UPN9 0 100.0 E3 ubiquitin-pr...
Homo sapiens
CAI13550 0 99.9 tripartite moti...
Homo sapiens
AAD17259 0 99.6 transcriptional...
Homo sapiens
XP_612660 0 97.6 similar to trip...
Bos taurus
CAB55313 0 99.5 rfg7 protein [H...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR000315 289 306 PR01406 Zinc finger
IPR000315 307 321 PR01406 Zinc finger
IPR001487 994 1010 PR00503 Bromodomain
IPR001487 1013 1031 PR00503 Bromodomain
IPR001487 1031 1050 PR00503 Bromodomain
HMMPfam IPR000315 216 263 PF00643 Zinc finger
IPR000315 275 316 PF00643 Zinc finger
IPR001965 893 938 PF00628 Zinc finger
IPR001487 966 1055 PF00439 Bromodomain
HMMSmart IPR001965 128 189 SM00249 Zinc finger
IPR001841 129 188 SM00184 Zinc finger
IPR000315 216 263 SM00336 Zinc finger
IPR001841 221 283 SM00184 Zinc finger
IPR000315 275 316 SM00336 Zinc finger
IPR003649 323 449 SM00502 B-box
IPR001965 893 936 SM00249 Zinc finger
IPR001487 963 1086 SM00297 Bromodomain
ProfileScan IPR001841 129 189 PS50089 Zinc finger
IPR000315 216 263 PS50119 Zinc finger
IPR000315 275 316 PS50119 Zinc finger
IPR001965 891 938 PS50016 Zinc finger
IPR001487 978 1050 PS50014 Bromodomain
ScanRegExp IPR001841 149 158 PS00518 Zinc finger
IPR001965 894 935 PS01359 Zinc finger
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