Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01879
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Accession No
Product ID ORK01879
Clone name ee06575
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol NFX1
cDNA sequence DNA sequence (3302 bp)
Predicted protein sequence (837 aa)
Flexi ORF Clone FXC01879
Description Transcriptional repressor NF-X1 (EC 6.3.2.-) (Nuclear transcription factor, X box-binding, 1).
Features of the cloned cDNA sequence

Length: 3302 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Features of the protein sequence

Length: 837 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAG11072 0 100.0 transcriptional...
 synthetic construct
CAH72747 0 99.8 nuclear transcr...
 Homo sapiens
CAH92536 0 98.6 hypothetical pr...
 Pongo abelii
AAK16545 0 100.0 nuclear transcr...
 Homo sapiens
Q12986 0 100.0 Transcriptional...
 Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001841 382 413 PF00097 Zinc finger
IPR000967 458 476 PF01422 Zinc finger
IPR000967 511 530 PF01422 Zinc finger
IPR000967 572 591 PF01422 Zinc finger
IPR000967 637 660 PF01422 Zinc finger
IPR000967 699 718 PF01422 Zinc finger
IPR000967 726 745 PF01422 Zinc finger
HMMSmart IPR001841 363 413 SM00184 Zinc finger
IPR000967 458 476 SM00438 Zinc finger
IPR000967 511 530 SM00438 Zinc finger
IPR000967 572 591 SM00438 Zinc finger
IPR000967 637 660 SM00438 Zinc finger
IPR000967 699 718 SM00438 Zinc finger
IPR000967 726 745 SM00438 Zinc finger
IPR000967 783 802 SM00438 Zinc finger
ProfileScan IPR001965 360 416 PS50016 Zinc finger
IPR001841 363 414 PS50089 Zinc finger
ScanRegExp IPR001965 363 413 PS01359 Zinc finger
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