Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01884
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Accession No
Product ID ORK01884
Clone name fj14187
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol GRM4
cDNA sequence DNA sequence (3896 bp)
Predicted protein sequence (959 aa)
Flexi ORF Clone FXC01884
Description Metabotropic glutamate receptor 4 precursor (mGluR4).
Features of the cloned cDNA sequence

Length: 3896 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 602 bp
Genome contig ID gi89161210r_33998012
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
CATGTAAAATTCGGACGCGTGGGCGGACGCGTGGG
Flanking genome sequence
(323023 - 322974)
----+----*----+----*----+----*----+----*----+----*
GGAACAGTGAAGGAGCAGAGAGGGCGCCCCCAAACCAAAAGCCCAGAGAG

Features of the protein sequence

Length: 959 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q14833 0 100.0 Metabotropic gl...
Homo sapiens
BAF82223 0 99.7 unnamed protein...
Homo sapiens
BAF82213 0 99.7 unnamed protein...
Homo sapiens
Q1ZZH0 0 99.6 Metabotropic gl...
Macaca fascicularis
XP_001928404 0 98.0 similar to Meta...
Sus scrofa
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR001786 56 73 PR01054 Metabotropic glutamate receptor 4
IPR001786 73 91 PR01054 Metabotropic glutamate receptor 4
IPR000337 93 105 PR00248 GPCR
IPR000337 122 137 PR00248 GPCR
IPR000337 137 156 PR00248 GPCR
IPR001786 178 194 PR01054 Metabotropic glutamate receptor 4
IPR000337 200 226 PR00248 GPCR
IPR000337 233 252 PR00248 GPCR
IPR000337 252 268 PR00248 GPCR
IPR000337 268 285 PR00248 GPCR
IPR000162 295 306 PR00593 Metabotropic glutamate receptor
IPR000162 312 324 PR00593 Metabotropic glutamate receptor
IPR001786 339 356 PR01054 Metabotropic glutamate receptor 4
IPR000162 377 392 PR00593 Metabotropic glutamate receptor
IPR001786 420 435 PR01054 Metabotropic glutamate receptor 4
IPR000162 448 459 PR00593 Metabotropic glutamate receptor
IPR001786 544 562 PR01054 Metabotropic glutamate receptor 4
IPR000337 662 684 PR00248 GPCR
IPR000162 703 717 PR00593 Metabotropic glutamate receptor
IPR000337 707 728 PR00248 GPCR
IPR000337 746 769 PR00248 GPCR
IPR001786 774 788 PR01054 Metabotropic glutamate receptor 4
IPR000337 806 829 PR00248 GPCR
IPR000337 829 850 PR00248 GPCR
IPR000162 868 882 PR00593 Metabotropic glutamate receptor
IPR001786 917 931 PR01054 Metabotropic glutamate receptor 4
IPR001786 939 958 PR01054 Metabotropic glutamate receptor 4
HMMPfam IPR001828 124 530 PF01094 Extracellular ligand-binding receptor
IPR011500 563 598 PF07562 Nine cysteines of 3 GPCR
IPR000337 638 899 PF00003 GPCR
ProfileScan IPR000337 634 908 PS50259 GPCR
ScanRegExp IPR000337 212 230 PS00979 GPCR
IPR000337 585 607 PS00980 GPCR
IPR000337 828 838 PS00981 GPCR

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 635 AVLPLFLAVVGIAATLFVVITFV 657 PRIMARY 23
2 671 ELSYVLLAGIFLCYATTFLMIAE 693 SECONDARY 23
3 744 ASQLAITFSLISLQLLGICVWFV 766 PRIMARY 23
4 798 LSLICLLGYSMLLMVTCTVYAIK 820 PRIMARY 23
5 836 FTMYTTCIVWLAFIPIFFGTSQS 858 PRIMARY 23
6 866 TTTLTVSVSLSASVSLGMLYMPK 888 SECONDARY 23
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